IMGVR_UViG_646564555_000004-646564555-646645411

Arc-Vir

Identity

71.7 mean pLDDT

View cluster (3 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 20-58_78-225

PDB

Domain cluster: rep: AB044554.1__BAA97847.1__X__00040__D16-168

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kdrA02	3.40.140.120	Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 ›	0.80	40.0	4.91e-01	70.6%	73.2%
1gn4A02	3.55.40.20	Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain	0.58	29.0	3.58e-01	75.9%	75.7%
3qvnA02	3.55.40.20	Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain	0.55	28.0	3.43e-01	75.4%	76.1%
3mp6A05	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.52	18.0	2.95e-01	76.5%	85.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3942943	4056.1.1.1 ↗	beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Phage_prot_Gp6	0.63	52.0	4.69e-01	87.2%	98.4%

D2 medium residues 393-458

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2pjpA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.68	33.0	3.43e-01	78.8%	49.2%
3nb0B03	6.10.260.10	Special › Helix non-globular › F1FO ATP Synthase ›	0.62	35.0	3.28e-01	100.0%	40.5%
2rdpA00	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.56	41.0	3.20e-01	77.3%	61.4%
6x6nA01	1.20.120.260	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Virulence factor YopE uncharacterised domain	0.53	45.0	3.82e-01	100.0%	88.0%
4nqwA02	1.10.10.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain	0.52	36.0	3.68e-01	72.7%	84.4%
1go4A00	3.30.900.10	Alpha Beta › 2-Layer Sandwich › Cell Cycle, Spindle Assembly Checkpoint Protein; Chain A › HORMA domain	0.51	38.0	2.72e-01	90.9%	26.5%
1wr8A01	3.40.50.1000	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like	0.50	38.0	2.87e-01	81.8%	94.4%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4954786	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.76	41.0	3.72e-01	100.0%	40.0%
4971829	101.1.2.135 ↗	alpha arrays › HTH › HTH › winged helix domain › MarR_2	0.62	33.0	3.27e-01	78.8%	50.0%
3587739	101.1.2.66 ↗	alpha arrays › HTH › HTH › winged helix domain › Mga	0.55	31.0	3.12e-01	81.8%	51.4%
4015693	859.1.1.0 ↗	a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2	0.52	44.0	3.17e-01	98.5%	98.6%
338175	859.1.1.1 ↗	a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › HORMA	0.51	38.0	2.70e-01	90.9%	25.9%
4648944	101.1.2.88 ↗	alpha arrays › HTH › HTH › winged helix domain › Dimerisation	0.51	36.0	2.57e-01	75.8%	41.9%
4278991	2007.1.14.6 ↗	a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › CbiX	0.51	35.0	2.91e-01	74.2%	40.6%
3775175	3826.1.1.0 ↗	alpha bundles › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR) › Copper-sensitive operon repressor (CsoR)	0.50	32.0	2.89e-01	100.0%	44.0%