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IMGVR_UViG_648028040_000001-648028040-648194437
Arc-VirIMGVR_UViG_648028040_000001-648028040-648194437
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-88
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kluA01 | 3.30.2220.30 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › | 0.77 | 69.0 | 5.87e-01 | 100.0% | 87.3% |
| 2odaA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.63 | 48.0 | 3.44e-01 | 89.7% | 29.2% |
| 1tuaA01 | 3.30.1370.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 | 0.60 | 38.0 | 3.61e-01 | 100.0% | 52.4% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.58 | 41.0 | 3.78e-01 | 75.0% | 63.8% |
| 2xkoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 3.60e-01 | 83.8% | 57.4% |
| 3n89A01 | 3.30.310.270 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.52 | 34.0 | 2.53e-01 | 100.0% | 22.6% |
| 4b7hA03 | 1.20.1370.60 | Mainly Alpha › Up-down Bundle › Hemocyanin, N-terminal domain › | 0.51 | 42.0 | 3.50e-01 | 89.7% | 59.1% |
| 2vixA02 | 1.10.150.630 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.50 | 38.0 | 3.50e-01 | 100.0% | 62.9% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4957561 | 6050.1.1.0 ↗ | a+b two layers › Phage tail assembly chaperone › Phage tail assembly chaperone › Phage tail assembly chaperone | 0.85 | 77.0 | 6.59e-01 | 100.0% | 84.8% |
| 5039151 | 3103.1.1.0 ↗ | alpha arrays › Uncharacterized protein yqbN › Uncharacterized protein yqbN › Uncharacterized protein yqbN | 0.78 | 70.0 | 6.14e-01 | 100.0% | 96.0% |
| 4631118 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 39.0 | 2.29e-01 | 100.0% | 7.5% |
| None | — | 0.56 | 39.0 | 2.28e-01 | 100.0% | 8.4% | |
| 3882062 | 101.1.1.53 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › BEN | 0.53 | 44.0 | 3.79e-01 | 89.7% | 61.9% |
| 1721651 | 7579.1.1.10 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Thioesterase | 0.51 | 38.0 | 2.69e-01 | 85.3% | 63.4% |