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IMGVR_UViG_650716053_000001-650716053-650872025

Arc-Vir

IMGVR_UViG_650716053_000001-650716053-650872025

Identity

Kingdom:
archaea

Quality

89.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-68
PDB
Domain cluster: representative
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3d79A01 3.10.450.120 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 0.66 47.0 4.56e-01 74.6% 79.7%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 43.0 3.15e-01 71.6% 76.5%
3j7yD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 47.0 4.44e-01 82.1% 91.4%
3gasA01 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.62 53.0 5.06e-01 98.5% 82.3%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 52.0 3.37e-01 94.0% 47.2%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 42.0 3.01e-01 73.1% 71.2%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 42.0 3.18e-01 73.1% 74.5%
4c5wA01 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.59 49.0 4.41e-01 94.0% 86.6%
4a9wA00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 41.0 2.64e-01 73.1% 86.4%
5ygqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 2.83e-01 71.6% 68.0%
1b37A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 39.0 2.69e-01 70.1% 83.0%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 40.0 3.67e-01 73.1% 94.4%
2la7A01 2.40.128.270 Mainly Beta › Beta Barrel › Lipocalin › 0.57 46.0 3.80e-01 91.0% 97.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.56 36.0 3.99e-01 76.1% 89.6%
1vwxA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 43.0 4.13e-01 86.6% 91.3%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 38.0 3.48e-01 73.1% 89.2%
2vvlG01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 40.0 2.77e-01 80.6% 71.9%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 37.0 3.48e-01 73.1% 94.5%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 45.0 3.79e-01 94.0% 91.5%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.54 40.0 4.14e-01 79.1% 85.5%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 44.0 3.72e-01 94.0% 90.1%
8f5pC01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 43.0 2.85e-01 89.6% 22.2%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.53 44.0 3.73e-01 94.0% 89.7%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 38.0 3.82e-01 91.0% 75.0%
3jyyA01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.53 41.0 3.36e-01 88.1% 53.0%
5kiqA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.52 40.0 4.01e-01 88.1% 87.5%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 34.0 3.72e-01 74.6% 95.7%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.52 42.0 4.01e-01 92.5% 90.0%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 34.0 3.76e-01 74.6% 86.8%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 36.0 3.85e-01 94.0% 90.7%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 43.0 3.72e-01 94.0% 80.0%
2o8bA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.52 40.0 3.79e-01 85.1% 83.1%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.52 42.0 3.77e-01 92.5% 84.8%
4nhxA02 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.52 41.0 2.92e-01 92.5% 88.1%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 2.91e-01 80.6% 55.4%
2v1rA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 35.0 3.60e-01 73.1% 86.6%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.65e-01 92.5% 75.8%
1jegA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 35.0 3.69e-01 73.1% 88.3%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 34.0 3.53e-01 71.6% 77.6%
2zauA01 3.30.1330.10 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › PurM-like, N-terminal domain 0.51 34.0 2.86e-01 70.1% 65.9%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 41.0 3.15e-01 92.5% 91.1%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 2.94e-01 94.0% 68.3%
3h27A00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.50 41.0 2.55e-01 94.0% 31.2%
3ng7X01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 41.0 2.94e-01 94.0% 82.4%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.71e-01 74.6% 80.6%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 37.0 3.71e-01 92.5% 77.1%
4g56D00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 43.0 2.86e-01 100.0% 71.9%
ECOD (68)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3839435 330.9.1.0 ↗ a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p 0.66 42.0 4.09e-01 92.5% 57.3%
3357079 5.3.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › B_lectin 0.66 53.0 4.45e-01 89.6% 88.3%
3924808 719.2.1.0 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like 0.62 52.0 4.96e-01 94.0% 87.5%
3758025 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.62 47.0 3.90e-01 82.1% 61.7%
3609597 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.60 41.0 4.25e-01 92.5% 78.3%
3993968 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.60 47.0 3.69e-01 86.6% 55.9%
4621007 2003.1.2.102 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3, Pyr_redox_2 0.60 40.0 3.01e-01 70.1% 80.6%
3862126 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.59 40.0 4.19e-01 92.5% 78.3%
3218646 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 38.0 3.86e-01 77.6% 66.2%
3299797 4.1.1.306 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.59 37.0 3.93e-01 92.5% 71.7%
3728847 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.59 41.0 2.54e-01 73.1% 68.8%
3598284 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 40.0 4.28e-01 92.5% 85.5%
4833642 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 33.0 3.81e-01 73.1% 82.2%
3990001 4.8.1.5 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.58 41.0 4.44e-01 74.6% 100.0%
3404936 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 37.0 4.15e-01 73.1% 88.0%
4946183 243.6.1.12 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › PUA 0.58 47.0 4.60e-01 92.5% 81.3%
3200493 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.58 37.0 3.99e-01 76.1% 80.0%
3304602 4.1.1.427 ↗ beta barrels › SH3 › SH3 › SH3 › F-box 0.57 41.0 3.70e-01 83.6% 53.7%
3962306 2003.1.2.15 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.57 39.0 2.53e-01 71.6% 77.2%
4971539 243.6.1.1 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 0.57 47.0 4.54e-01 92.5% 81.3%
3817476 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 37.0 4.08e-01 92.5% 88.0%
3993250 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.57 37.0 4.03e-01 91.0% 81.8%
4249154 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.57 39.0 2.75e-01 73.1% 61.8%
3998022 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.57 36.0 3.84e-01 76.1% 78.2%
3498860 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.56 45.0 2.89e-01 88.1% 38.0%
3989485 4.1.1.28 ↗ beta barrels › SH3 › SH3 › SH3 › BPL_C 0.56 37.0 4.11e-01 92.5% 92.0%
1263713 4.1.1.102 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_3 0.56 38.0 4.17e-01 89.6% 90.4%
3464113 5.1.10.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.56 45.0 4.02e-01 91.0% 86.0%
3621818 4.1.1.333 ↗ beta barrels › SH3 › SH3 › SH3 › PF29330 0.56 36.0 4.06e-01 92.5% 90.0%
3938589 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.56 36.0 4.02e-01 73.1% 88.0%
2641775 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.56 44.0 3.56e-01 88.1% 45.5%
5049994 243.6.1.4 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › Pre-PUA 0.55 45.0 4.39e-01 91.0% 81.3%
3924469 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 44.0 3.11e-01 88.1% 57.3%
4960839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 35.0 3.09e-01 95.5% 42.0%
3326980 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.55 37.0 3.89e-01 92.5% 78.3%
4321173 4.1.1.98 ↗ beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.55 39.0 4.11e-01 88.1% 84.5%
3920026 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.55 39.0 2.77e-01 82.1% 23.8%
3649741 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.55 39.0 3.85e-01 85.1% 69.3%
3486496 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 38.0 4.13e-01 86.6% 92.7%
4023922 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.54 42.0 3.39e-01 88.1% 42.1%
4282594 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.54 42.0 3.42e-01 88.1% 43.7%
3989972 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 44.0 4.14e-01 92.5% 90.6%
4890790 4167.1.1.1 ↗ beta complex topology › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › Flagellar hook protein flgE D1 domain › LlgE_F_G_D1 0.54 45.0 3.72e-01 97.0% 77.5%
3558188 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.53 38.0 3.70e-01 82.1% 68.0%
4667986 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 42.0 3.30e-01 88.1% 40.0%
3037102 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 36.0 3.74e-01 89.6% 77.4%
1145920 4.1.1.33 ↗ beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.53 34.0 3.27e-01 77.6% 53.0%
3235419 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 36.0 3.77e-01 94.0% 80.0%
3264879 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 38.0 3.83e-01 85.1% 75.7%
3850775 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.53 38.0 3.85e-01 91.0% 78.5%
3510676 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.53 40.0 3.61e-01 83.6% 61.1%
4078549 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.53 42.0 3.33e-01 91.0% 43.3%
4945675 4.1.1.38 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.52 42.0 3.33e-01 91.0% 43.3%
4487255 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 39.0 3.84e-01 88.1% 73.3%
3480350 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 36.0 3.67e-01 73.1% 78.5%
5038340 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.52 41.0 3.98e-01 88.1% 80.0%
4218142 4.1.1.101 ↗ beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.52 38.0 3.39e-01 85.1% 53.0%
3514867 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.52 36.0 3.54e-01 74.6% 68.0%
4187800 4.1.1.39 ↗ beta barrels › SH3 › SH3 › SH3 › SHD1 0.52 37.0 3.88e-01 80.6% 86.7%
3184377 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.52 42.0 2.58e-01 92.5% 83.7%
3482683 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 36.0 3.76e-01 74.6% 85.0%
3485745 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 37.0 3.90e-01 92.5% 88.3%
2890675 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.51 36.0 3.67e-01 74.6% 79.7%
5041872 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.51 41.0 4.04e-01 92.5% 86.7%
3563220 4.1.1.220 ↗ beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor 0.51 40.0 3.86e-01 89.6% 83.7%
3243188 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.51 40.0 3.89e-01 88.1% 92.0%
3864347 4.1.1.92 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_9 0.50 35.0 3.55e-01 73.1% 90.8%
3222210 4.1.1.54 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_2 0.50 40.0 4.02e-01 91.0% 90.0%