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IMGVR_UViG_650716055_000001-650716055-650917121

Arc-Vir

IMGVR_UViG_650716055_000001-650716055-650917121

Identity

Kingdom:
archaea

Quality

74.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-71
PDB
CATH (86)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vxzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 68.0 6.93e-01 95.6% 87.9%
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 74.0 5.43e-01 100.0% 38.7%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 74.0 6.38e-01 100.0% 65.0%
2l01A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 68.0 6.51e-01 95.6% 77.9%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 66.0 6.27e-01 95.6% 74.4%
3cjnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 71.0 5.43e-01 100.0% 43.2%
3cuqA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 68.0 6.40e-01 97.1% 76.2%
6j0eB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 71.0 5.83e-01 100.0% 54.7%
3lfkD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 71.0 5.90e-01 100.0% 58.2%
1p6rA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 72.0 6.71e-01 100.0% 80.5%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 66.0 5.85e-01 100.0% 64.5%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 70.0 6.49e-01 100.0% 77.4%
6qpqB00 1.10.10.580 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E 0.79 71.0 6.72e-01 100.0% 95.1%
2co5A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 73.0 6.50e-01 100.0% 75.0%
6uvuA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 66.0 5.72e-01 100.0% 60.6%
4hqeA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 72.0 6.13e-01 100.0% 67.6%
2qvoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 71.0 6.53e-01 100.0% 79.3%
4asnA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 71.0 6.41e-01 100.0% 78.9%
1ucrB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.42e-01 95.6% 85.3%
2fe3B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 66.0 6.09e-01 92.6% 75.3%
2rdpA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 68.0 5.24e-01 100.0% 46.4%
1u5tA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 67.0 6.50e-01 95.6% 88.0%
2mh2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 6.52e-01 92.6% 96.9%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 65.0 6.13e-01 94.1% 79.3%
1sd4A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 62.0 6.42e-01 92.6% 95.3%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.86e-01 94.1% 71.4%
2lsoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 66.0 6.18e-01 97.1% 86.7%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 68.0 5.80e-01 100.0% 65.7%
1tbxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 68.0 6.16e-01 100.0% 76.7%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.90e-01 94.1% 75.3%
2pg4A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 67.0 6.07e-01 100.0% 79.1%
3eyyA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 6.01e-01 94.1% 78.0%
1u5tB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 62.0 6.22e-01 92.6% 92.8%
2vqcA00 1.10.10.1470 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like 0.73 60.0 6.02e-01 94.1% 90.0%
4ejoA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 66.0 5.55e-01 100.0% 61.6%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 65.0 6.28e-01 98.5% 89.3%
5iceA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.65e-01 100.0% 67.3%
4c9yA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.72 60.0 4.93e-01 92.6% 77.2%
3elkA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 65.0 5.56e-01 100.0% 67.6%
7txnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.83e-01 100.0% 75.6%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 64.0 5.93e-01 100.0% 81.0%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 63.0 5.50e-01 100.0% 68.3%
2lycA00 1.10.10.1890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Ska1 microtubule binding domain-like 0.70 60.0 4.84e-01 95.6% 76.9%
2b0lC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 59.0 5.34e-01 100.0% 72.3%
2xzn800 3.30.63.20 Alpha Beta › 2-Layer Sandwich › Guanylate Kinase phosphate binding domain › 0.67 54.0 4.94e-01 100.0% 66.7%
5nl9A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 53.0 4.97e-01 89.7% 73.8%
2v1nA01 1.10.10.2030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA/RNA-binding protein Kin17, conserved domain 0.64 55.0 4.89e-01 100.0% 76.2%
2wa0A01 1.10.10.1200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif 0.64 53.0 4.81e-01 100.0% 75.2%
3zihA00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.64 49.0 4.74e-01 95.6% 74.7%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.63 49.0 4.41e-01 89.7% 60.6%
3jcmH04 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.63 44.0 4.28e-01 83.8% 64.9%
2kloA00 1.10.10.1420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DNA replication factor Cdt1, C-terminal WH domain 0.63 53.0 4.33e-01 98.5% 50.7%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.63 44.0 4.44e-01 83.8% 73.9%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.62 48.0 4.71e-01 95.6% 77.9%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.62 49.0 4.68e-01 94.1% 74.4%
2dy1A03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.62 43.0 4.24e-01 83.8% 67.1%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 42.0 3.91e-01 83.8% 56.2%
1ybtB00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.60 45.0 3.46e-01 83.8% 36.6%
4izzB03 1.10.10.1670 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, flap domain 0.60 51.0 4.42e-01 100.0% 97.4%
1i6uA01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.58 49.0 4.91e-01 95.6% 91.2%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.57 51.0 4.86e-01 98.5% 96.2%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 39.0 3.54e-01 83.8% 49.5%
2cveA02 3.30.70.240 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 36.0 3.73e-01 83.8% 68.2%
1xkpC00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 43.0 3.66e-01 88.2% 68.3%
5llwA02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.55 41.0 3.38e-01 83.8% 45.3%
1dctA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.55 42.0 3.23e-01 85.3% 83.2%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.55 48.0 4.73e-01 100.0% 94.7%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.55 35.0 3.46e-01 83.8% 58.1%
2r7cA02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.53 43.0 3.36e-01 91.2% 47.1%
1nrwA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.53 41.0 3.41e-01 86.8% 96.2%
2qv6B02 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.53 40.0 3.39e-01 83.8% 50.8%
1azsA00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.53 39.0 2.96e-01 82.4% 70.0%
2okmA00 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 42.0 3.41e-01 92.6% 51.4%
2gu0A02 3.30.428.20 Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › Rotavirus NSP2 fragment, C-terminal domain 0.52 42.0 3.28e-01 91.2% 43.4%
4ofzA03 3.30.70.3080 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 42.0 3.92e-01 94.1% 82.0%
2wz1B00 3.30.70.1230 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain 0.52 42.0 3.14e-01 94.1% 60.7%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 42.0 3.57e-01 94.1% 97.6%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 42.0 3.72e-01 91.2% 95.0%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 40.0 3.65e-01 88.2% 75.3%
5a72A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.51 43.0 3.41e-01 100.0% 58.0%
1nf2A02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 41.0 3.61e-01 91.2% 94.3%
3ezjA02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 35.0 3.55e-01 83.8% 73.5%
4zevA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 40.0 3.56e-01 91.2% 93.5%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.51 40.0 4.10e-01 92.6% 92.5%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 40.0 3.94e-01 91.2% 89.3%
3dfeA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 38.0 3.60e-01 83.8% 74.4%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5016606 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.88 83.0 6.34e-01 100.0% 49.3%
4937110 101.1.2.128 alpha arrays › HTH › HTH › winged helix domain › DUF2582 0.86 72.0 6.94e-01 92.6% 80.0%
5077205 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.85 77.0 6.86e-01 100.0% 83.2%
5028058 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.84 62.0 5.06e-01 91.2% 44.2%
5057532 101.1.2.893 alpha arrays › HTH › HTH › winged helix domain › DUF2226 0.83 71.0 4.57e-01 98.5% 21.9%
4956545 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 75.0 7.46e-01 95.6% 94.3%
5056642 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.83 72.0 6.30e-01 100.0% 65.3%
3278292 101.1.2.136 alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.82 70.0 6.18e-01 98.5% 65.3%
5057657 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 68.0 5.58e-01 94.1% 52.2%
4976723 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.82 74.0 7.39e-01 97.1% 94.3%
3989662 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.81 73.0 5.80e-01 100.0% 52.0%
4971050 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 70.0 7.05e-01 92.6% 92.8%
3997898 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.81 75.0 6.18e-01 100.0% 65.2%
5048525 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 73.0 6.73e-01 97.1% 80.0%
5001174 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 72.0 6.79e-01 95.6% 82.5%
5077786 101.1.2.927 alpha arrays › HTH › HTH › winged helix domain › DUF7347 0.81 74.0 6.83e-01 100.0% 81.2%
3587913 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.81 71.0 5.60e-01 100.0% 49.2%
5043608 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.81 71.0 7.14e-01 94.1% 94.1%
3339574 101.1.2.385 alpha arrays › HTH › HTH › winged helix domain › HRQ1_WHD 0.80 65.0 5.88e-01 100.0% 65.6%
3439131 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.80 74.0 6.21e-01 100.0% 70.6%
3505845 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.80 73.0 6.38e-01 100.0% 76.0%
4068860 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.80 71.0 5.77e-01 100.0% 54.2%
3282605 101.1.2.508 alpha arrays › HTH › HTH › winged helix domain › PF25872 0.80 68.0 6.43e-01 100.0% 78.8%
2601 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.80 72.0 6.71e-01 100.0% 80.5%
4996058 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.80 68.0 5.59e-01 98.5% 53.9%
5078802 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 68.0 6.82e-01 94.1% 95.7%
3178207 101.1.2.774 alpha arrays › HTH › HTH › winged helix domain › PF30201 0.79 70.0 5.10e-01 97.1% 37.7%
3510258 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 66.0 6.59e-01 98.5% 88.6%
5010401 101.1.2.30 alpha arrays › HTH › HTH › winged helix domain › TrmB 0.78 65.0 5.68e-01 100.0% 61.0%
5031186 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.78 70.0 6.81e-01 97.1% 88.0%
3942501 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 72.0 6.50e-01 100.0% 86.7%
3472278 101.1.2.206 alpha arrays › HTH › HTH › winged helix domain › SAMD1_WH 0.78 73.0 7.04e-01 100.0% 96.0%
3930245 101.1.2.407 alpha arrays › HTH › HTH › winged helix domain › WHD_ORC2 0.78 70.0 5.96e-01 100.0% 69.1%
3603379 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 67.0 6.34e-01 98.5% 78.8%
5053069 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 63.0 6.70e-01 92.6% 100.0%
4659379 101.1.2.39 alpha arrays › HTH › HTH › winged helix domain › SMC_ScpA 0.78 70.0 6.95e-01 97.1% 94.3%
5041057 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 70.0 6.18e-01 97.1% 71.6%
5046509 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 65.0 6.31e-01 97.1% 82.7%
3165321 101.1.2.280 alpha arrays › HTH › HTH › winged helix domain › HTH_12 0.78 71.0 6.45e-01 100.0% 80.0%
5017587 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.78 66.0 6.11e-01 98.5% 74.1%
4937876 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.78 71.0 5.73e-01 100.0% 54.4%
3979431 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 71.0 5.34e-01 100.0% 46.7%
3169812 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.76 66.0 4.97e-01 95.6% 42.5%
5070584 101.1.2.48 alpha arrays › HTH › HTH › winged helix domain › PadR 0.76 68.0 6.14e-01 100.0% 73.3%
3951002 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.76 68.0 5.39e-01 98.5% 50.4%
3962953 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.76 69.0 5.75e-01 100.0% 60.0%
5028329 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.76 64.0 6.28e-01 95.6% 93.3%
3821131 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.76 69.0 6.42e-01 100.0% 92.8%
4995778 101.1.2.368 alpha arrays › HTH › HTH › winged helix domain › HTH_36 0.76 67.0 6.23e-01 97.1% 78.8%
3462675 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.75 68.0 6.37e-01 100.0% 90.4%
3273469 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.75 64.0 5.99e-01 100.0% 77.1%
4026719 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 68.0 5.46e-01 98.5% 56.0%
3304324 101.1.2.106 alpha arrays › HTH › HTH › winged helix domain › Tam41_Mmp37 0.75 66.0 5.30e-01 100.0% 68.9%
2602 101.1.2.54 alpha arrays › HTH › HTH › winged helix domain › Penicillinase_R 0.75 65.0 5.33e-01 100.0% 53.3%
4933315 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 64.0 6.08e-01 94.1% 80.0%
3831895 101.1.2.312 alpha arrays › HTH › HTH › winged helix domain › MSC 0.74 66.0 4.36e-01 100.0% 31.3%
4965091 101.1.2.908 alpha arrays › HTH › HTH › winged helix domain › DUF5787 0.74 58.0 5.55e-01 100.0% 73.8%
4977499 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 67.0 5.49e-01 100.0% 60.8%
5075009 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 66.0 5.90e-01 100.0% 76.8%
3301908 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.73 65.0 5.83e-01 100.0% 71.6%
5052340 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 60.0 6.02e-01 92.6% 94.3%
3590297 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 64.0 5.61e-01 100.0% 66.0%
3631391 101.1.2.53 alpha arrays › HTH › HTH › winged helix domain › Mnd1 0.72 61.0 6.09e-01 100.0% 90.0%
3468120 101.1.2.65 alpha arrays › HTH › HTH › winged helix domain › Rad21_Rec8 0.72 65.0 6.03e-01 100.0% 82.4%
3315108 101.1.2.88 alpha arrays › HTH › HTH › winged helix domain › Dimerisation 0.72 64.0 5.47e-01 100.0% 65.5%
3617968 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.72 65.0 5.71e-01 97.1% 93.7%
4946714 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.72 62.0 5.69e-01 97.1% 80.0%
3279756 101.1.2.25 alpha arrays › HTH › HTH › winged helix domain › FUR 0.71 62.0 4.89e-01 97.1% 47.1%
5071694 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 65.0 5.47e-01 100.0% 66.4%
None 0.71 61.0 4.99e-01 97.1% 51.9%
4940198 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.71 51.0 4.26e-01 92.6% 43.3%
3571824 101.1.2.601 alpha arrays › HTH › HTH › winged helix domain › TBPIP, LZ3wCH 0.71 62.0 4.37e-01 100.0% 31.2%
3205602 101.1.2.281 alpha arrays › HTH › HTH › winged helix domain › Tfb2 0.71 63.0 5.76e-01 100.0% 75.6%
3773922 101.1.2.82 alpha arrays › HTH › HTH › winged helix domain › TBPIP 0.71 62.0 4.81e-01 100.0% 44.7%
4024456 101.1.2.663 alpha arrays › HTH › HTH › winged helix domain › DUF7602 0.70 63.0 5.76e-01 100.0% 78.9%
3600806 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 6.11e-01 94.1% 100.0%
4027635 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.70 58.0 5.64e-01 95.6% 84.0%
3383404 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.70 61.0 5.37e-01 100.0% 71.2%
3334401 101.1.2.566 alpha arrays › HTH › HTH › winged helix domain › CDT1, CDT1_C 0.70 62.0 4.12e-01 100.0% 26.8%
3209384 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.69 60.0 5.47e-01 97.1% 91.1%
None 0.69 57.0 5.61e-01 98.5% 85.3%
3467284 101.1.2.154 alpha arrays › HTH › HTH › winged helix domain › CDT1_C 0.69 60.0 5.21e-01 100.0% 68.5%
3380431 101.1.2.22 alpha arrays › HTH › HTH › winged helix domain › PCI 0.69 57.0 5.10e-01 98.5% 64.0%
3621333 101.1.2.676 alpha arrays › HTH › HTH › winged helix domain › Mnd1, LZ3wCH 0.68 59.0 4.29e-01 98.5% 35.9%
5072831 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 50.0 5.21e-01 77.9% 88.9%
3744213 101.1.2.57 alpha arrays › HTH › HTH › winged helix domain › EAP30 0.67 55.0 4.40e-01 92.6% 50.7%
3855906 101.1.2.24 alpha arrays › HTH › HTH › winged helix domain › MAGE 0.66 54.0 5.32e-01 94.1% 90.7%
4025551 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.66 44.0 4.03e-01 82.4% 50.5%
3997731 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.65 45.0 4.37e-01 83.8% 63.7%
3601388 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.65 45.0 4.39e-01 82.4% 66.7%
3687245 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.62 53.0 4.65e-01 97.1% 64.8%
3830419 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.61 53.0 5.05e-01 100.0% 86.3%
5074515 328.9.1.1 a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain › SepF 0.59 48.0 4.46e-01 95.6% 71.1%
4051394 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 37.0 3.70e-01 83.8% 64.3%
3182652 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.52 43.0 4.16e-01 95.6% 83.7%
4028219 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.52 41.0 3.57e-01 89.7% 91.8%
3313280 304.9.1.47 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.50 36.0 3.38e-01 83.8% 60.0%
D2 high residues 74-120
PDB
Domain cluster: representative
CATH (87)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.85 74.0 6.97e-01 100.0% 80.4%
4gvpA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.85 68.0 4.33e-01 95.7% 19.9%
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.84 67.0 6.69e-01 95.7% 83.7%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 64.0 6.06e-01 95.7% 71.4%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.83 70.0 6.21e-01 95.7% 66.7%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 64.0 6.04e-01 95.7% 70.7%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 71.0 6.78e-01 100.0% 83.6%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 62.0 5.03e-01 83.0% 46.0%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.81 63.0 6.07e-01 87.2% 74.1%
3tgnB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 66.0 5.98e-01 95.7% 66.7%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 63.0 5.29e-01 95.7% 51.2%
1gdtB03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.80 63.0 6.47e-01 97.9% 91.1%
5f64A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 63.0 5.37e-01 95.7% 54.7%
4pcqA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 61.0 6.00e-01 85.1% 82.0%
1tc3C00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 64.0 6.28e-01 89.4% 82.4%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 65.0 6.26e-01 97.9% 81.5%
1s3jA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.78 64.0 5.79e-01 95.7% 67.2%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 60.0 5.26e-01 95.7% 56.9%
3gw2A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 4.97e-01 97.9% 45.2%
2cobA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 61.0 6.28e-01 91.5% 95.5%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.77 65.0 5.17e-01 100.0% 53.5%
2ethA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 63.0 4.45e-01 95.7% 30.5%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 58.0 5.36e-01 83.0% 66.7%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 61.0 5.36e-01 89.4% 67.6%
2e18A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.76 66.0 4.13e-01 100.0% 23.8%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 63.0 6.22e-01 97.9% 88.0%
4ijaA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 64.0 5.79e-01 97.9% 69.8%
6cc0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 60.0 5.33e-01 95.7% 60.0%
4rs8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 65.0 5.34e-01 95.7% 54.8%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.75 68.0 4.90e-01 100.0% 37.3%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 60.0 6.08e-01 91.5% 100.0%
4go1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 61.0 5.87e-01 91.5% 87.0%
1sfxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 64.0 4.89e-01 97.9% 42.3%
3g3zA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 63.0 5.69e-01 97.9% 68.8%
2llkA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.75 59.0 6.23e-01 89.4% 100.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 60.0 5.49e-01 95.7% 66.7%
2o8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 59.0 5.48e-01 95.7% 68.9%
4izzB02 1.10.10.1680 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › HetR, N-terminal DNA-binding domain 0.74 63.0 5.68e-01 100.0% 70.6%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 62.0 5.68e-01 100.0% 71.4%
2esnA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 58.0 4.71e-01 95.7% 46.1%
4kmfA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 65.0 5.90e-01 97.9% 74.2%
2jt1A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 64.0 5.62e-01 100.0% 71.8%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.73 64.0 4.90e-01 100.0% 43.1%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 56.0 4.73e-01 95.7% 48.8%
1lnwF01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 64.0 4.73e-01 100.0% 43.5%
1umqA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 62.0 5.74e-01 97.9% 81.7%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 5.61e-01 97.9% 68.7%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 5.55e-01 100.0% 65.3%
3bddD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 4.56e-01 100.0% 40.9%
3bj6B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 64.0 4.46e-01 100.0% 37.1%
3f8mA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 62.0 5.58e-01 95.7% 76.9%
1k6yA01 1.10.10.200 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Integrase, N-terminal zinc-binding domain 0.72 55.0 5.57e-01 87.2% 89.1%
3e6mA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 63.0 4.44e-01 100.0% 33.6%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 63.0 5.21e-01 97.9% 56.8%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.71 60.0 4.30e-01 100.0% 31.9%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 59.0 5.35e-01 95.7% 68.2%
3hugA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.10e-01 95.7% 56.2%
6jqsA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 61.0 5.43e-01 100.0% 68.7%
3cuoD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 63.0 4.97e-01 100.0% 50.0%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.70 59.0 5.62e-01 95.7% 85.7%
3onqA03 1.10.10.2840 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PucR C-terminal helix-turn-helix domain 0.70 58.0 4.23e-01 93.6% 33.6%
3fxqB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 55.0 4.52e-01 95.7% 46.7%
1hw1A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.09e-01 95.7% 72.0%
3cuqB03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 62.0 5.46e-01 100.0% 68.1%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 61.0 5.11e-01 97.9% 70.9%
8amzO01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 59.0 3.57e-01 100.0% 34.1%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.50e-01 97.9% 73.0%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 61.0 5.16e-01 100.0% 64.1%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 4.88e-01 100.0% 59.2%
2fbhA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 58.0 4.18e-01 97.9% 40.9%
1zarA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 60.0 4.83e-01 100.0% 56.2%
3op9A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.67 46.0 4.13e-01 72.3% 52.9%
1g2hA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 53.0 4.94e-01 91.5% 73.8%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 57.0 5.01e-01 97.9% 68.6%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 51.0 4.28e-01 95.7% 47.7%
3bs3A00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.66 50.0 4.59e-01 80.9% 98.3%
4fx0A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 55.0 4.15e-01 97.9% 41.8%
1ojlA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 50.0 5.06e-01 93.6% 89.4%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.64 55.0 4.89e-01 93.6% 67.7%
3d0sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 53.0 4.52e-01 95.7% 71.2%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 54.0 4.66e-01 97.9% 66.2%
2lvsA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 51.0 5.05e-01 95.7% 91.8%
1b9mB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 53.0 4.28e-01 100.0% 54.5%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 52.0 3.73e-01 100.0% 55.5%
2cmpA00 1.10.10.1400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Terminase, small subunit, N-terminal DNA-binding domain, HTH motif 0.61 50.0 4.86e-01 100.0% 87.5%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.56 44.0 3.83e-01 89.4% 80.5%
1qb2A00 1.10.260.30 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › Signal recognition particle, SRP54 subunit, M-domain 0.55 44.0 3.41e-01 89.4% 50.0%
ECOD (98)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3391053 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.89 75.0 7.72e-01 95.7% 95.6%
3933366 101.1.6.12 alpha arrays › HTH › HTH › TrpR › HTH_23 0.88 76.0 6.57e-01 93.6% 62.9%
4997092 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.87 70.0 6.09e-01 87.2% 60.0%
4927516 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.87 70.0 6.42e-01 95.7% 68.3%
4979402 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 72.0 6.62e-01 97.9% 71.7%
3410877 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.85 73.0 6.32e-01 95.7% 62.9%
4985590 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.85 66.0 7.03e-01 93.6% 100.0%
5006645 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.84 69.0 6.36e-01 91.5% 71.7%
3789627 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.84 71.0 6.34e-01 95.7% 67.7%
4002185 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.83 66.0 5.63e-01 97.9% 54.7%
4973199 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 69.0 6.37e-01 91.5% 71.7%
3505559 101.1.6.19 alpha arrays › HTH › HTH › TrpR › PAX 0.83 70.0 5.97e-01 95.7% 58.7%
3879118 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.83 68.0 6.51e-01 97.9% 78.2%
3589359 101.1.1.68 alpha arrays › HTH › HTH › Three-helical HTH › HTH_38 0.82 63.0 6.76e-01 87.2% 97.5%
5021231 101.1.1.544 alpha arrays › HTH › HTH › Three-helical HTH › DUF1670 0.82 74.0 6.03e-01 100.0% 69.4%
3587644 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 69.0 6.41e-01 93.6% 73.3%
4054648 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 73.0 6.94e-01 100.0% 87.3%
4470400 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 65.0 5.68e-01 95.7% 58.6%
3974013 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.82 65.0 5.98e-01 95.7% 68.3%
5043241 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.82 63.0 6.70e-01 91.5% 100.0%
3590541 142.1.1.3 alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 0.82 65.0 4.30e-01 95.7% 22.8%
4952807 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.82 73.0 6.21e-01 100.0% 62.7%
4143289 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.82 67.0 6.38e-01 91.5% 78.2%
5018585 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.82 63.0 6.05e-01 97.9% 72.7%
4031116 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 67.0 6.18e-01 91.5% 71.7%
4404485 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.81 64.0 5.95e-01 95.7% 68.3%
3942922 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 62.0 5.31e-01 89.4% 52.0%
4162857 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 67.0 6.64e-01 95.7% 86.0%
1159643 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.81 71.0 6.19e-01 100.0% 64.8%
4987653 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.81 65.0 6.63e-01 97.9% 91.1%
3210747 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.81 65.0 6.69e-01 91.5% 91.1%
5004841 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 68.0 6.05e-01 95.7% 66.2%
3930711 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 66.0 6.76e-01 93.6% 93.3%
4031756 101.1.2.645 alpha arrays › HTH › HTH › winged helix domain › HTH_40 0.81 64.0 5.25e-01 95.7% 48.2%
3997733 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.81 73.0 6.53e-01 100.0% 81.5%
5043001 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.81 66.0 5.01e-01 97.9% 40.0%
3243649 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.81 73.0 5.82e-01 100.0% 70.0%
4139052 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 63.0 5.42e-01 95.7% 54.7%
4937081 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 63.0 5.69e-01 95.7% 63.1%
3946793 101.1.1.259 alpha arrays › HTH › HTH › Three-helical HTH › Terminase_5 0.80 65.0 4.83e-01 89.4% 38.3%
4927434 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 66.0 6.77e-01 95.7% 95.6%
3989075 101.1.3.11 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_Tnp_ISL3 0.80 59.0 6.34e-01 80.9% 100.0%
5060990 2005.1.1.18 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › NAD_synthase 0.79 69.0 4.27e-01 100.0% 21.6%
5011648 101.1.1.368 alpha arrays › HTH › HTH › Three-helical HTH › HTH_58 0.79 65.0 6.43e-01 95.7% 86.0%
4992594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 64.0 6.53e-01 93.6% 93.3%
4010213 101.1.1.218 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_IS1 0.79 63.0 6.20e-01 91.5% 84.0%
3944309 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.79 62.0 6.10e-01 95.7% 82.0%
3278040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.79 65.0 6.00e-01 91.5% 71.7%
5014141 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.79 66.0 6.55e-01 93.6% 88.0%
5080109 101.1.2.139 alpha arrays › HTH › HTH › winged helix domain › HTH_23 0.79 66.0 5.70e-01 95.7% 60.0%
4967740 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 65.0 6.18e-01 95.7% 78.2%
3477795 101.1.3.0 alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 58.0 5.92e-01 83.0% 88.9%
3946608 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.78 62.0 5.47e-01 95.7% 60.0%
4008959 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 6.10e-01 91.5% 81.8%
4952035 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.77 65.0 6.03e-01 93.6% 73.3%
4976345 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.77 62.0 5.81e-01 91.5% 73.3%
5045567 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.77 66.0 5.50e-01 100.0% 56.2%
3976103 101.1.3.1 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › GerE 0.77 60.0 5.44e-01 95.7% 63.1%
3204806 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.46e-01 97.9% 95.6%
4943227 101.1.1.63 alpha arrays › HTH › HTH › Three-helical HTH › HTH_28 0.76 62.0 6.32e-01 93.6% 97.8%
3753093 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.76 59.0 5.38e-01 91.5% 63.1%
5024511 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 5.99e-01 91.5% 84.0%
5002577 101.1.1.60 alpha arrays › HTH › HTH › Three-helical HTH › HTH_23 0.76 66.0 4.95e-01 100.0% 42.5%
5067887 101.1.2.40 alpha arrays › HTH › HTH › winged helix domain › CPSase_L_D3 0.76 66.0 4.84e-01 100.0% 53.6%
3590198 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.76 57.0 4.63e-01 83.0% 45.6%
4486944 7565.1.1.0 a/b three-layered sandwiches › Resolvase-like › Resolvase-like › Resolvase-like 0.75 61.0 4.07e-01 89.4% 23.3%
4142399 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 60.0 4.87e-01 95.7% 46.7%
4952294 101.1.2.870 alpha arrays › HTH › HTH › winged helix domain › GerE 0.75 62.0 5.92e-01 97.9% 78.2%
3280379 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 63.0 4.96e-01 100.0% 45.0%
3286796 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.75 64.0 5.05e-01 100.0% 47.4%
5007028 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.75 60.0 5.75e-01 100.0% 78.2%
3289370 101.1.1.300 alpha arrays › HTH › HTH › Three-helical HTH › HTH_30 0.75 62.0 4.84e-01 97.9% 44.0%
3942514 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.75 66.0 6.48e-01 100.0% 96.0%
3986842 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 61.0 5.33e-01 91.5% 70.0%
3565285 101.1.1.24 alpha arrays › HTH › HTH › Three-helical HTH › CENP-B_N 0.74 58.0 5.30e-01 91.5% 64.6%
5002651 101.1.2.141 alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.74 64.0 5.12e-01 100.0% 50.5%
4957415 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.74 58.0 5.44e-01 97.9% 71.7%
3988145 101.1.6.0 alpha arrays › HTH › HTH › TrpR 0.74 58.0 5.74e-01 95.7% 82.0%
3286340 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.74 62.0 4.98e-01 100.0% 48.4%
4466704 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.74 62.0 4.88e-01 100.0% 45.0%
3282047 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 63.0 4.94e-01 100.0% 46.0%
3288236 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 59.0 4.82e-01 95.7% 47.8%
4642479 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 62.0 4.94e-01 100.0% 47.4%
3280215 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 61.0 4.87e-01 100.0% 47.4%
3955106 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.73 61.0 4.97e-01 97.9% 50.0%
4031535 101.1.1.275 alpha arrays › HTH › HTH › Three-helical HTH › GerE 0.72 59.0 5.51e-01 95.7% 71.7%
3944389 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.72 60.0 4.94e-01 97.9% 51.8%
3289886 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.72 57.0 4.42e-01 95.7% 40.0%
4998383 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.71 56.0 4.53e-01 95.7% 44.2%
3280686 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 60.0 4.77e-01 100.0% 46.0%
3597464 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 63.0 5.80e-01 97.9% 76.7%
3590732 101.1.1.364 alpha arrays › HTH › HTH › Three-helical HTH › HTH_49 0.71 55.0 5.59e-01 97.9% 95.6%
3987666 101.1.3.4 alpha arrays › HTH › HTH › tetra-helical, LuxR-like › HTH_30 0.71 56.0 4.65e-01 95.7% 49.4%
4008322 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.70 60.0 5.77e-01 97.9% 89.1%
3977861 101.1.2.1 alpha arrays › HTH › HTH › winged helix domain › HTH_1 0.70 56.0 4.72e-01 93.6% 51.8%
3590546 101.1.1.17 alpha arrays › HTH › HTH › Three-helical HTH › HTH_7 0.69 59.0 5.68e-01 97.9% 85.2%
3971281 101.1.1.18 alpha arrays › HTH › HTH › Three-helical HTH › HTH_8 0.69 59.0 5.62e-01 97.9% 85.5%
4560931 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 54.0 4.67e-01 95.7% 56.0%