←Back to structures
gene_300912
Arc-VirIMGVR_UViG_7000000171_000334-7000000171-C3375923__gene_300912
Identity
- Protein ID:
- gene_300912 ↗
- Kingdom:
- archaea
Quality
67.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-100
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2i71A01 | 3.40.50.10640 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SSO1389-like | 0.65 | 49.0 | 3.41e-01 | 80.6% | 47.5% |
| 6zxbA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 46.0 | 3.62e-01 | 74.6% | 90.3% |
| 3rrkA03 | 3.30.70.2750 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 34.0 | 3.33e-01 | 100.0% | 44.6% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.64 | 47.0 | 5.01e-01 | 98.5% | 93.0% |
| 3rosA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.64 | 44.0 | 3.17e-01 | 71.6% | 57.4% |
| 6pnuA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.63 | 43.0 | 3.11e-01 | 71.6% | 55.8% |
| 5vbfA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.62 | 42.0 | 3.08e-01 | 71.6% | 57.4% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.61 | 48.0 | 4.30e-01 | 85.1% | 67.0% |
| 3ckcA01 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.60 | 47.0 | 3.35e-01 | 88.1% | 30.9% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 44.0 | 3.90e-01 | 85.1% | 52.8% |
| 1hywA00 | 3.30.1580.10 | Alpha Beta › 2-Layer Sandwich › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W | 0.57 | 41.0 | 4.38e-01 | 82.1% | 87.9% |
| 3zqmA00 | 6.10.140.2160 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 40.0 | 4.25e-01 | 71.6% | 89.8% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.57 | 50.0 | 3.89e-01 | 100.0% | 69.1% |
| 1xppD00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.57 | 37.0 | 3.20e-01 | 100.0% | 43.6% |
| 2w8nA02 | 3.40.309.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 2 › Aldehyde Dehydrogenase; Chain A, domain 2 | 0.56 | 42.0 | 3.03e-01 | 100.0% | 28.3% |
| 5kd5A01 | 1.10.390.30 | Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › Peptidase M60, enhancin-like domain 3 | 0.56 | 48.0 | 3.51e-01 | 95.5% | 40.2% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.56 | 47.0 | 3.94e-01 | 100.0% | 69.3% |
| 4f7aA00 | 1.25.40.390 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 43.0 | 2.64e-01 | 88.1% | 19.5% |
| 2e5vA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.56 | 44.0 | 2.99e-01 | 91.0% | 30.8% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 41.0 | 3.63e-01 | 85.1% | 51.4% |
| 2nvnA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.55 | 48.0 | 4.02e-01 | 100.0% | 91.7% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.54 | 45.0 | 3.70e-01 | 100.0% | 69.3% |
| 4n4nB00 | 3.90.640.100 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › | 0.54 | 39.0 | 4.17e-01 | 91.0% | 94.6% |
| 1fxkC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 41.0 | 3.37e-01 | 85.1% | 51.9% |
| 2jubA02 | 2.20.25.370 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ipi1, C-terminal domain | 0.53 | 31.0 | 3.74e-01 | 71.6% | 100.0% |
| 1xq6A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 39.0 | 2.70e-01 | 80.6% | 47.4% |
| 3c4nA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 38.0 | 2.67e-01 | 79.1% | 98.7% |
| 1bm9A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 3.41e-01 | 100.0% | 48.3% |
| 2v79A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 36.0 | 3.09e-01 | 100.0% | 44.3% |
| 5i47B02 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.51 | 32.0 | 3.23e-01 | 98.5% | 62.7% |
| 5h20A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 37.0 | 3.29e-01 | 100.0% | 52.4% |
| 3cllA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.50 | 41.0 | 2.91e-01 | 97.0% | 78.0% |
| 4ne4A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.50 | 35.0 | 2.74e-01 | 76.1% | 86.8% |
ECOD (61)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991646 | 3281.1.1.1 ↗ | alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M | 0.70 | 57.0 | 3.44e-01 | 89.6% | 16.7% |
| 3515407 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.68 | 53.0 | 3.91e-01 | 83.6% | 39.3% |
| 3991902 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.67 | 53.0 | 4.50e-01 | 85.1% | 62.7% |
| 3238753 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 52.0 | 3.82e-01 | 85.1% | 40.0% |
| 3817420 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.64 | 50.0 | 3.66e-01 | 83.6% | 37.7% |
| 5005164 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.64 | 56.0 | 4.79e-01 | 98.5% | 97.2% |
| 5045811 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.64 | 46.0 | 3.45e-01 | 85.1% | 30.9% |
| 3276335 | 109.26.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_NUP160_120_M | 0.64 | 51.0 | 3.78e-01 | 88.1% | 43.4% |
| 4955909 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.63 | 57.0 | 4.78e-01 | 100.0% | 97.3% |
| 5053551 | 3241.1.1.1 ↗ | alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34 | 0.63 | 40.0 | 2.86e-01 | 100.0% | 21.0% |
| 2725264 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.62 | 47.0 | 3.53e-01 | 83.6% | 42.8% |
| 3518635 | 109.26.1.6 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › TPR_NUP160_120_M | 0.61 | 50.0 | 3.29e-01 | 92.5% | 23.5% |
| 139279 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.61 | 48.0 | 4.30e-01 | 85.1% | 67.0% |
| 3594109 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.61 | 47.0 | 3.65e-01 | 83.6% | 44.0% |
| 3491256 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 47.0 | 3.53e-01 | 85.1% | 41.7% |
| 5029327 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.61 | 53.0 | 4.46e-01 | 100.0% | 97.5% |
| 3183972 | 109.4.1.70 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CID | 0.61 | 44.0 | 3.25e-01 | 80.6% | 72.0% |
| 3497934 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.60 | 47.0 | 3.20e-01 | 85.1% | 22.8% |
| 3228583 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 45.0 | 3.85e-01 | 85.1% | 47.8% |
| 4381440 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 47.0 | 3.97e-01 | 85.1% | 54.8% |
| 5055466 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.60 | 53.0 | 4.45e-01 | 100.0% | 99.1% |
| 5029669 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.60 | 47.0 | 3.86e-01 | 85.1% | 51.7% |
| 5036311 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.59 | 50.0 | 4.38e-01 | 92.5% | 100.0% |
| 4983914 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.59 | 36.0 | 3.46e-01 | 100.0% | 51.2% |
| 3785655 | 109.26.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains › Nuclear pore complex component Nup133/Nup170/Nup157 C-terminal domains | 0.59 | 49.0 | 3.66e-01 | 92.5% | 41.7% |
| 4647653 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.59 | 46.0 | 2.86e-01 | 86.6% | 56.7% |
| 1000517 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.59 | 44.0 | 3.96e-01 | 85.1% | 55.4% |
| 3392569 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.59 | 45.0 | 3.74e-01 | 85.1% | 49.6% |
| 4974951 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.59 | 49.0 | 4.48e-01 | 97.0% | 100.0% |
| 5000789 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 45.0 | 3.94e-01 | 85.1% | 62.9% |
| 4995244 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.58 | 43.0 | 3.72e-01 | 85.1% | 50.0% |
| 5011379 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 42.0 | 3.72e-01 | 76.1% | 88.4% |
| 3661331 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.58 | 48.0 | 3.65e-01 | 95.5% | 60.6% |
| 4962870 | 101.1.2.101 ↗ | alpha arrays › HTH › HTH › winged helix domain › Cdc6_C | 0.57 | 47.0 | 3.98e-01 | 95.5% | 83.7% |
| 4666900 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 43.0 | 3.59e-01 | 85.1% | 44.8% |
| 3409703 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 43.0 | 3.60e-01 | 85.1% | 53.1% |
| 4626792 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 44.0 | 3.50e-01 | 85.1% | 48.3% |
| 4681355 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 42.0 | 3.57e-01 | 85.1% | 45.8% |
| 3586018 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 42.0 | 3.44e-01 | 85.1% | 40.0% |
| 3321176 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.57 | 49.0 | 3.04e-01 | 100.0% | 55.7% |
| 3289306 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.56 | 42.0 | 3.05e-01 | 80.6% | 45.5% |
| 4945806 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.56 | 43.0 | 3.58e-01 | 83.6% | 65.8% |
| 4999532 | 101.1.2.48 ↗ | alpha arrays › HTH › HTH › winged helix domain › PadR | 0.56 | 38.0 | 2.68e-01 | 71.6% | 31.1% |
| 3771989 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 42.0 | 3.43e-01 | 83.6% | 43.7% |
| 3691694 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 42.0 | 3.52e-01 | 85.1% | 50.4% |
| 3610621 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.55 | 39.0 | 2.54e-01 | 76.1% | 43.8% |
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 42.0 | 3.39e-01 | 85.1% | 41.4% |
| 5077402 | 2007.15.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase | 0.55 | 41.0 | 3.08e-01 | 82.1% | 32.4% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.55 | 42.0 | 3.57e-01 | 85.1% | 54.8% |
| 4934732 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 40.0 | 3.44e-01 | 82.1% | 56.7% |
| 3993677 | 823.1.1.0 ↗ | a+b two layers › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW › Head-to-tail joining protein W, gpW | 0.54 | 42.0 | 4.18e-01 | 88.1% | 82.9% |
| 4418047 | 7523.1.1.46 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Lipoprotein_10+Lipoprotein_X | 0.54 | 40.0 | 2.54e-01 | 83.6% | 55.2% |
| 3935332 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 40.0 | 3.33e-01 | 85.1% | 43.1% |
| 3265214 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.53 | 39.0 | 3.41e-01 | 85.1% | 48.7% |
| 5054910 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.52 | 36.0 | 3.30e-01 | 73.1% | 78.9% |
| 3198044 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.52 | 39.0 | 3.63e-01 | 86.6% | 87.4% |
| 3664519 | 5051.1.1.6 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Aa_trans | 0.52 | 42.0 | 2.66e-01 | 100.0% | 58.1% |
| 3596698 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.51 | 43.0 | 3.90e-01 | 97.0% | 73.7% |
| 4476647 | 101.1.2.15 ↗ | alpha arrays › HTH › HTH › winged helix domain › MarR | 0.51 | 41.0 | 3.30e-01 | 91.0% | 61.4% |
| 3271834 | 109.4.1.816 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RALGAPB_N | 0.51 | 43.0 | 2.52e-01 | 100.0% | 11.0% |
| 3493963 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.51 | 40.0 | 3.49e-01 | 85.1% | 75.0% |