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gene_114205

Arc-Vir

IMGVR_UViG_7000000193_000088-7000000193-SRS048870_WUGC_scaffold_52489__gene_114205

Identity

Accession:: IMGVR_UViG_7000000193_000088-7000000193-SRS048870_WUGC_scaffold_52489 ↗
Protein ID:: gene_114205 ↗
Kingdom:: archaea

Quality

82.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-73

PDB

Domain cluster: representative

CATH (11)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4kjmA02	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.74	55.0	5.73e-01	79.0%	100.0%
2lmgA00	1.20.1270.10	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 ›	0.71	51.0	4.84e-01	77.4%	100.0%
2pg0A03	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.69	51.0	3.95e-01	82.3%	65.1%
1lfuP00	1.10.10.60	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like	0.64	35.0	3.16e-01	100.0%	39.0%
2qwoB00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.60	40.0	3.59e-01	71.0%	54.3%
2kr6A01	1.10.472.100	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Presenilin	0.60	42.0	3.54e-01	74.2%	46.2%
3m03B00	1.10.472.10	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like	0.58	40.0	3.58e-01	74.2%	81.1%
1fadA00	1.10.533.10	Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas	0.55	40.0	3.56e-01	79.0%	90.5%
3axjB02	1.20.58.200	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2	0.55	41.0	3.78e-01	83.9%	90.6%
2w45A01	1.20.120.860	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Herpesvirus alkaline exonuclease, N-terminal domain	0.53	42.0	3.46e-01	88.7%	62.9%
1b04A03	1.10.287.610	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin	0.50	35.0	3.56e-01	74.2%	100.0%

ECOD (10)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4367294	192.5.1.0 ↗	alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat	0.65	38.0	4.06e-01	100.0%	66.7%
3693312	101.1.1.0 ↗	alpha arrays › HTH › HTH › Three-helical HTH	0.63	33.0	3.44e-01	98.4%	51.7%
4960621	2004.1.1.42 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE	0.63	43.0	2.55e-01	72.6%	9.4%
3290505	148.1.3.0 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain	0.60	44.0	4.60e-01	77.4%	89.1%
3207621	174.1.1.0 ↗	few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain	0.58	44.0	3.37e-01	82.3%	65.8%
4370994	604.3.1.14 ↗	alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › Serinc	0.55	40.0	3.18e-01	79.0%	67.7%
3970399	7512.1.1.48 ↗	a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › DUF3492	0.53	38.0	2.53e-01	77.4%	55.8%
5022685	101.1.2.90 ↗	alpha arrays › HTH › HTH › winged helix domain › HTH_9	0.53	38.0	3.94e-01	82.3%	81.7%
4982700	2484.1.1.330 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF460	0.52	38.0	2.92e-01	98.4%	31.2%
3626122	192.29.1.0 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding)	0.52	34.0	3.47e-01	90.3%	70.0%