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gene_185919
Arc-VirIMGVR_UViG_7000000193_000208-7000000193-C1909376__gene_185919
Identity
- Protein ID:
- gene_185919 ↗
- Kingdom:
- archaea
Quality
93.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-64
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05105.18 best | Phage_holin_4_1 | 55.6 | 8.20e-15 | 93.8% | 53.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4efcA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.62 | 32.0 | 3.35e-01 | 90.6% | 50.8% |
| 1vw4L02 | 1.10.246.170 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.56 | 35.0 | 3.17e-01 | 96.9% | 45.9% |
| 1id1A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 40.0 | 3.12e-01 | 84.4% | 41.2% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598903 | 1038.1.1.0 ↗ | alpha complex topology › Pre-mRNA-splicing factor 8 N-terminal domain › Pre-mRNA-splicing factor 8 N-terminal domain › Pre-mRNA-splicing factor 8 N-terminal domain | 0.75 | 57.0 | 3.19e-01 | 81.2% | 11.6% |
| 3583169 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.74 | 54.0 | 5.00e-01 | 76.6% | 62.5% |
| 3400028 | 3843.1.1.30 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › DUF4781 | 0.72 | 57.0 | 5.21e-01 | 85.9% | 85.9% |
| 5039201 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.71 | 54.0 | 3.70e-01 | 98.4% | 24.2% |
| 3948171 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.69 | 49.0 | 4.06e-01 | 75.0% | 81.8% |
| 3686172 | 109.4.1.496 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec5 | 0.68 | 47.0 | 2.68e-01 | 71.9% | 25.8% |
| 2485668 | 7025.1.1.2 ↗ | alpha bundles › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9-LIN52 heterodimer › LIN9_C | 0.63 | 44.0 | 4.03e-01 | 71.9% | 63.1% |
| 3715279 | 101.1.1.276 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-binding, Myb_DNA-bind_6 | 0.63 | 50.0 | 3.55e-01 | 84.4% | 33.3% |
| 3423128 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.62 | 55.0 | 4.19e-01 | 100.0% | 67.3% |
| 3379868 | 148.1.3.277 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › LETM1_RBD | 0.57 | 41.0 | 3.90e-01 | 84.4% | 63.7% |