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gene_309720
Arc-VirIMGVR_UViG_7000000736_000355-7000000736-C3557046__gene_309720
Identity
- Protein ID:
- gene_309720 ↗
- Kingdom:
- archaea
Quality
80.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-54
Domain cluster:
rep: k141_307134_prodigal-single.1__X__X__00202__D3-47
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2pfmA02 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.58 | 47.0 | 3.06e-01 | 90.6% | 57.4% |
| 2d5wA03 | 3.10.105.10 | Alpha Beta › Roll › Dipeptide-binding Protein; domain 3 › Dipeptide-binding Protein; Domain 3 | 0.57 | 39.0 | 2.56e-01 | 75.5% | 15.7% |
| 2lonA01 | 6.10.140.1320 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 43.0 | 4.05e-01 | 83.0% | 75.4% |
| 3bsoA02 | 6.10.250.3230 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 34.0 | 3.35e-01 | 73.6% | 56.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5018523 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.77 | 60.0 | 5.51e-01 | 86.8% | 65.7% |
| 3408969 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.73 | 51.0 | 4.65e-01 | 73.6% | 82.9% |
| 4003121 | 377.1.1.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › zf-C4 | 0.69 | 33.0 | 3.50e-01 | 71.7% | 52.1% |
| 3987428 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.65 | 50.0 | 3.95e-01 | 79.2% | 60.0% |
| 3318393 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.65 | 52.0 | 4.38e-01 | 90.6% | 63.2% |
| 3478669 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.62 | 44.0 | 3.19e-01 | 77.4% | 33.5% |
| 4371313 | 101.1.2.1 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_1 | 0.61 | 50.0 | 4.20e-01 | 94.3% | 55.8% |
| 4392843 | 1037.1.1.1 ↗ | alpha bundles › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › Prolipoprotein diacylglyceryl transferase › LGT | 0.60 | 48.0 | 3.05e-01 | 94.3% | 70.5% |
| 3441516 | 109.3.1.11 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank_5 | 0.59 | 49.0 | 3.02e-01 | 94.3% | 19.7% |
| 1295901 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.59 | 44.0 | 3.23e-01 | 79.2% | 97.0% |
| 3723402 | 3352.1.1.4 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › Alg6_Alg8 | 0.57 | 49.0 | 2.80e-01 | 98.1% | 12.6% |
| 3621034 | 3978.1.1.2 ↗ | alpha complex topology › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › Integral membrane Acyl-CoA desaturase › FA_hydroxylase | 0.56 | 48.0 | 2.87e-01 | 96.2% | 51.4% |