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IMV_membrane_protein
Euk-VirNile_crocodilepox_virus
IMV_membrane_protein__YP_784258__Nile_crocodilepox_virus__1285600
Identity
- Accession:
- YP_784258 ↗
- Protein ID:
- IMV_membrane_protein
- Kingdom:
- euk
Quality
83.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Crocodylidpoxvirus›
Nile_crocodilepox_virus
TaxID: 1285600
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 21-77
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04713.18 best | Pox_I5 | 71.8 | 5.50e-20 | 100.0% | 73.3% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qmhA00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.63 | 44.0 | 2.96e-01 | 73.7% | 19.5% |
| 4n4gA01 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.60 | 48.0 | 3.95e-01 | 91.2% | 88.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934012 | 5081.1.1.4 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 | 0.72 | 62.0 | 4.25e-01 | 96.5% | 56.5% |
| 3683642 | 109.4.1.954 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_EF3_N | 0.63 | 42.0 | 2.91e-01 | 70.2% | 23.6% |