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IMV_protein

Euk-Vir

Western_grey_kangaroopox_virus

IMV_protein__YP_010085259__Western_grey_kangaroopox_virus__1566307

Identity

Accession:
YP_010085259 ↗
Protein ID:
IMV_protein
Kingdom:
euk

Quality

82.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-60
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF06015.18 best Chordopox_A30L 69.2 3.00e-19 100.0% 70.4%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4w4kA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.89 80.0 6.60e-01 100.0% 58.5%
2kp8A00 1.20.5.170 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.84 77.0 6.74e-01 100.0% 87.5%
7toiA01 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.80 55.0 3.57e-01 76.0% 16.7%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.80 64.0 5.16e-01 90.0% 47.3%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.77 65.0 5.80e-01 96.0% 67.1%
4fd4A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.72 48.0 3.14e-01 70.0% 46.2%
3fdqA01 1.20.120.1030 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Motility repressor MogR, DNA-binding domain 0.70 52.0 3.84e-01 78.0% 44.3%
7ztbB01 3.30.460.10 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 0.66 54.0 3.86e-01 94.0% 29.4%
6wgmA00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.64 49.0 3.07e-01 86.0% 65.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3591288 604.12.1.8 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT 0.78 62.0 4.71e-01 90.0% 36.0%
4174963 7011.1.1.0 alpha bundles › RodA transmembrane domain › RodA transmembrane domain › RodA transmembrane domain 0.72 60.0 3.54e-01 94.0% 12.8%
4675496 3198.1.1.1 alpha bundles › ABA-1 repeat unit › ABA-1 repeat unit › ABA-1 repeat unit › NPA 0.71 50.0 3.78e-01 74.0% 31.7%