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ISSoc2,_transposase
Euk-VirKaumoebavirus_Viruses.
ISSoc2,_transposase__YP_009352565__Kaumoebavirus_Viruses.__X
Identity
- Accession:
- YP_009352565 ↗
- Protein ID:
- ISSoc2,_transposase
- Kingdom:
- euk
Quality
79.9
mean pLDDT
Cluster
View cluster (37 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 183-320
Domain cluster:
rep: IMGVR_UViG_3300029775_000002-3300029775-Ga0134843_100044344__D173-355
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01385.26 best | OrfB_IS605 | 34.9 | 2.30e-08 | 71.7% | 81.7% |
D2
medium
residues 1-16_117-176
Domain cluster:
rep: ISSoc2,_transposase__YP_009352508__Kaumoebavirus_Viruses.__X__D154-214
D3
medium
residues 17-116
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.71 | 46.0 | 5.38e-01 | 72.0% | 100.0% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.66 | 49.0 | 5.00e-01 | 77.0% | 90.7% |
| 4ymuD00 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.65 | 50.0 | 3.89e-01 | 82.0% | 97.2% |
| 2a2fX02 | 1.20.58.670 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain D | 0.64 | 47.0 | 4.30e-01 | 76.0% | 62.0% |
| 2f48A03 | 1.10.10.480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Phosphofructokinase; domain 3 | 0.63 | 45.0 | 5.08e-01 | 93.0% | 100.0% |
| 8ex5A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.62 | 50.0 | 3.99e-01 | 85.0% | 51.8% |
| 5dukB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 35.0 | 4.19e-01 | 71.0% | 83.6% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 38.0 | 4.61e-01 | 81.0% | 100.0% |
| 4zqeA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 33.0 | 3.45e-01 | 81.0% | 55.2% |
| 1t6jA03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.61 | 46.0 | 4.60e-01 | 78.0% | 85.4% |
| 3lsjA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.61 | 46.0 | 4.02e-01 | 81.0% | 59.5% |
| 1q8cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.60 | 50.0 | 4.63e-01 | 92.0% | 93.9% |
| 1pw4A02 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.60 | 50.0 | 3.98e-01 | 93.0% | 85.8% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.59 | 41.0 | 3.99e-01 | 71.0% | 93.6% |
| 2d2sA02 | 1.20.58.1220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Exo84p, C-terminal helical domain | 0.59 | 38.0 | 3.87e-01 | 77.0% | 65.3% |
| 1zk8B02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.59 | 46.0 | 4.23e-01 | 85.0% | 79.5% |
| 2hroA02 | 1.10.274.10 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain | 0.58 | 40.0 | 3.74e-01 | 71.0% | 59.4% |
| 1jvmB00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.58 | 40.0 | 4.06e-01 | 78.0% | 71.0% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 40.0 | 3.70e-01 | 78.0% | 53.7% |
| 1w0bA01 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.58 | 42.0 | 4.42e-01 | 77.0% | 95.7% |
| 1txuA01 | 1.10.246.120 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.58 | 41.0 | 4.20e-01 | 74.0% | 83.0% |
| 1wteB01 | 1.10.3250.10 | Mainly Alpha › Orthogonal Bundle › type ii restriction endonuclease, domain 1 › type ii restriction endonuclease, domain 1 | 0.57 | 42.0 | 3.71e-01 | 76.0% | 75.5% |
| 3qqaA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 45.0 | 4.11e-01 | 89.0% | 84.4% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.56 | 39.0 | 3.82e-01 | 80.0% | 65.2% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 37.0 | 3.94e-01 | 70.0% | 77.0% |
| 4l6v600 | 1.10.8.110 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Photosystem I, reaction centre, subunit PsaF | 0.55 | 37.0 | 3.42e-01 | 95.0% | 54.4% |
| 4z4qA04 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.54 | 38.0 | 4.01e-01 | 98.0% | 83.1% |
| 3ragB00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.54 | 44.0 | 3.53e-01 | 94.0% | 100.0% |
| 1u3dA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.54 | 37.0 | 3.42e-01 | 89.0% | 53.7% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 37.0 | 3.49e-01 | 81.0% | 58.5% |
| 6fahC01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 44.0 | 4.16e-01 | 99.0% | 76.5% |
| 2kvsA00 | 1.10.150.260 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like | 0.53 | 33.0 | 3.61e-01 | 81.0% | 77.5% |
| 3fhnA01 | 6.10.280.210 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A | 0.53 | 38.0 | 3.12e-01 | 84.0% | 41.3% |
| 4nooB00 | 1.10.8.1160 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 34.0 | 3.51e-01 | 76.0% | 69.5% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.52 | 38.0 | 3.31e-01 | 77.0% | 85.6% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.51 | 47.0 | 4.32e-01 | 100.0% | 88.9% |
| 4m9aA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.51 | 41.0 | 3.96e-01 | 100.0% | 76.5% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975282 | 545.1.2.0 ↗ | alpha bundles › Gametocyte protein Pfg27-related › Gametocyte protein Pfg27-related › Sporozoite protein UIS3 soluble domain | 0.83 | 64.0 | 7.05e-01 | 86.0% | 100.0% |
| 3286638 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.79 | 74.0 | 6.10e-01 | 100.0% | 60.6% |
| 4993593 | 198.1.1.27 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like › PF27234 | 0.78 | 60.0 | 6.55e-01 | 92.0% | 100.0% |
| 3615421 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 55.0 | 4.19e-01 | 81.0% | 62.8% |
| 3475068 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.69 | 62.0 | 4.51e-01 | 100.0% | 73.6% |
| 3927949 | 2008.1.1.29 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Dna2 | 0.69 | 58.0 | 4.44e-01 | 93.0% | 60.0% |
| 4252854 | 198.1.1.0 ↗ | alpha arrays › Saposin-like › Saposin-like › Saposin-like | 0.68 | 49.0 | 5.47e-01 | 89.0% | 98.7% |
| 3353757 | 621.1.1.1 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GBP_C | 0.67 | 50.0 | 5.12e-01 | 79.0% | 89.5% |
| 4932388 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.67 | 47.0 | 5.19e-01 | 89.0% | 97.3% |
| 3584465 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.66 | 54.0 | 4.87e-01 | 85.0% | 73.8% |
| 3957445 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.65 | 51.0 | 4.89e-01 | 82.0% | 76.5% |
| 4554825 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.64 | 49.0 | 5.14e-01 | 81.0% | 94.4% |
| 3584182 | 604.9.1.18 ↗ | alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Zip | 0.62 | 44.0 | 4.78e-01 | 74.0% | 100.0% |
| 3231673 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 42.0 | 4.72e-01 | 78.0% | 92.0% |
| 3694079 | 101.1.2.290 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF3759 | 0.62 | 50.0 | 4.79e-01 | 90.0% | 81.7% |
| 3495706 | 5050.1.1.23 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › CLN3 | 0.62 | 50.0 | 4.07e-01 | 88.0% | 96.8% |
| 3515954 | 604.1.1.22 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Senescence | 0.61 | 45.0 | 4.10e-01 | 78.0% | 82.2% |
| 3786229 | 5050.1.1.15 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Nodulin-like | 0.61 | 51.0 | 4.07e-01 | 95.0% | 82.8% |
| 4989797 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.61 | 51.0 | 3.98e-01 | 93.0% | 83.6% |
| 3788384 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 44.0 | 4.29e-01 | 82.0% | 70.6% |
| 4012651 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.60 | 48.0 | 3.95e-01 | 85.0% | 62.3% |
| 3962097 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.59 | 47.0 | 4.01e-01 | 85.0% | 56.4% |
| 1395462 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.59 | 46.0 | 4.34e-01 | 85.0% | 74.2% |
| 5039182 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.58 | 50.0 | 3.60e-01 | 95.0% | 79.3% |
| 4540510 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.57 | 40.0 | 3.38e-01 | 73.0% | 52.9% |
| 3176663 | 603.1.1.207 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF30350 | 0.57 | 39.0 | 3.57e-01 | 70.0% | 60.8% |
| 4034213 | 632.2.1.5 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains › DUF1542 | 0.56 | 36.0 | 3.94e-01 | 80.0% | 80.0% |
| 3822 | 604.4.1.1 ↗ | alpha bundles › Spectrin repeat-like › Alpha-hemoglobin stabilizing protein AHSP › Alpha-hemoglobin stabilizing protein AHSP › AHSP | 0.56 | 43.0 | 4.47e-01 | 81.0% | 100.0% |
| 3173336 | 1015.1.1.1 ↗ | alpha complex topology › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › Insulin-induced gene (Insig) homologs › INSIG | 0.56 | 41.0 | 3.38e-01 | 79.0% | 84.0% |
| 53265 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.55 | 48.0 | 4.60e-01 | 96.0% | 99.1% |
| 4034270 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.55 | 36.0 | 3.94e-01 | 77.0% | 83.7% |
| 3522 | 129.1.1.18 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › PDH_C | 0.55 | 47.0 | 4.57e-01 | 96.0% | 99.1% |
| 4224436 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 41.0 | 3.00e-01 | 81.0% | 30.4% |
| 3988174 | 632.19.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Choline binding protein A › Choline binding protein A › DUF1542 | 0.54 | 35.0 | 3.80e-01 | 77.0% | 78.8% |
| 3560590 | 3755.3.1.142 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C | 0.53 | 36.0 | 3.14e-01 | 70.0% | 80.7% |
| 4237257 | 632.15.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) | 0.53 | 36.0 | 3.77e-01 | 79.0% | 76.7% |
| 4985507 | 604.10.1.0 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac | 0.53 | 37.0 | 3.91e-01 | 73.0% | 91.1% |
| 3530812 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.53 | 37.0 | 3.83e-01 | 74.0% | 83.2% |
| 3601170 | 4156.1.1.0 ↗ | alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like | 0.52 | 45.0 | 3.57e-01 | 98.0% | 60.9% |
| 4942070 | 5050.1.1.87 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › LPG_synthase_TM | 0.50 | 40.0 | 3.14e-01 | 91.0% | 83.6% |
| 3683526 | 109.4.1.210 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19 | 0.50 | 37.0 | 2.88e-01 | 97.0% | 36.3% |