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IV-1

Euk-Vir

Baboon_adenovirus_3

IV-1__YP_007906022__Baboon_adenovirus_3__1298385

Identity

Accession:
YP_007906022 ↗
Protein ID:
IV-1
Kingdom:
euk

Quality

82.5 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Baboon_adenovirus_3

TaxID: 1298385

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 248-393
PDB
Domain cluster: rep: fiber__YP_009328924__Simian_mastadenovirus_WIV19__1923976__D315-484
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00541.25 best Adeno_knob 122.4 2.50e-35 100.0% 93.0%
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1kacA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.94 90.0 8.20e-01 100.0% 95.1%
6g47A00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.92 89.0 8.35e-01 100.0% 96.5%
1uxbA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.92 89.0 8.10e-01 100.0% 96.7%
2bzvA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.91 86.0 8.69e-01 100.0% 97.3%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.90 87.0 7.77e-01 100.0% 96.3%
2wstA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.89 85.0 7.87e-01 100.0% 96.0%
2j2jA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.87 82.0 7.56e-01 100.0% 96.2%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.77 27.0 4.30e-01 100.0% 80.0%
5dcaA08 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.67 37.0 4.17e-01 90.4% 70.0%
2g30A01 2.60.40.1150 Mainly Beta › Sandwich › Immunoglobulin-like › 0.67 39.0 4.28e-01 100.0% 70.1%
8alzB04 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.64 36.0 4.11e-01 90.4% 72.7%
4nehA04 2.60.40.1510 Mainly Beta › Sandwich › Immunoglobulin-like › ntegrin, alpha v. Chain A, domain 3 0.62 44.0 4.36e-01 90.4% 69.5%
2lakA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 31.0 3.09e-01 81.5% 48.8%
2va0A00 3.30.450.160 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.54 29.0 3.42e-01 80.1% 74.7%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.53 45.0 4.69e-01 100.0% 97.8%
3lifA02 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.53 32.0 3.85e-01 80.8% 95.6%
3li9A01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.52 33.0 3.54e-01 80.8% 73.4%
1kyfA01 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.51 37.0 3.81e-01 100.0% 79.9%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.51 35.0 3.65e-01 81.5% 72.1%
1p0zA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.51 32.0 3.35e-01 82.2% 67.9%
1uisA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 46.0 4.01e-01 100.0% 93.8%
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.50 32.0 3.77e-01 80.8% 98.9%
3lidA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.50 33.0 3.88e-01 81.5% 100.0%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2670467 5092.1.1.1 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Adeno_knob 0.92 89.0 7.70e-01 100.0% 92.2%
352878 5092.1.1.1 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › Adeno_knob 0.90 87.0 7.67e-01 100.0% 95.0%
3929117 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.73 45.0 5.06e-01 94.5% 80.0%
3527031 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.70 43.0 4.65e-01 87.7% 73.3%
3962692 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.70 38.0 4.45e-01 97.9% 76.0%
4027766 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.67 40.0 4.72e-01 88.4% 85.0%
3232198 11.1.5.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › muHD 0.67 41.0 4.52e-01 93.8% 75.7%
3919017 11.1.5.7 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub 0.66 44.0 4.81e-01 88.4% 81.7%
3742947 11.1.1.44 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Alpha_adaptinC2 0.66 37.0 4.03e-01 100.0% 65.0%
3989856 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.66 48.0 4.93e-01 100.0% 79.3%
3592495 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.65 38.0 4.21e-01 93.2% 71.3%
3472822 11.1.1.647 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GAE_BBS1 0.65 37.0 4.08e-01 93.8% 66.7%
3593021 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 38.0 3.99e-01 100.0% 64.4%
3277610 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 37.0 4.03e-01 98.6% 72.3%
3809112 11.1.1.45 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Sec63 0.60 31.0 3.57e-01 87.7% 65.5%
3308755 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 39.0 4.06e-01 100.0% 68.6%
3922399 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.59 33.0 3.58e-01 90.4% 62.4%
3893461 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 30.0 3.54e-01 90.4% 69.0%
5038947 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 31.0 3.83e-01 90.4% 83.5%
3213707 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 37.0 4.10e-01 88.4% 81.8%
4134441 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.57 34.0 3.69e-01 86.3% 68.0%
5078522 11.10.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.57 37.0 4.19e-01 95.9% 88.6%
3751313 11.1.1.982 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PIG-X 0.57 40.0 3.62e-01 89.0% 52.2%
3615406 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.56 33.0 3.94e-01 80.8% 85.0%
3269422 881.1.1.0 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.55 38.0 3.18e-01 100.0% 38.5%
3216991 331.15.1.0 ↗ a+b two layers › TBP-like › Anti-CRISPR protein AcrID1 › Anti-CRISPR protein AcrID1 0.55 32.0 4.05e-01 81.5% 95.6%
3966283 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.55 36.0 3.71e-01 82.9% 69.3%
3718938 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 33.0 3.65e-01 99.3% 78.8%
4988451 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.53 34.0 3.82e-01 80.8% 83.5%
3212872 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 36.0 3.91e-01 93.8% 87.0%
3244221 145.1.1.0 ↗ alpha arrays › F-box domain › F-box domain › F-box domain 0.52 38.0 3.14e-01 89.7% 42.4%
3168132 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 33.0 3.55e-01 100.0% 74.4%
4075142 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.52 30.0 3.09e-01 80.1% 59.3%
1286181 881.1.1.7 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3805 0.51 35.0 3.69e-01 81.5% 74.3%
3240153 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.51 39.0 4.14e-01 95.9% 93.6%
6838 223.1.1.35 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › sCache_3_2 0.51 32.0 3.35e-01 82.2% 67.9%
4960081 223.1.1.14 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_4 0.51 34.0 3.97e-01 80.8% 98.0%
3784793 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 38.0 3.94e-01 100.0% 82.9%
3221683 11.10.1.6 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like › MATH 0.50 38.0 3.96e-01 95.9% 89.2%
4392904 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.50 44.0 3.64e-01 99.3% 91.1%