IVa2

Euk-Vir

red_squirrel_adenovirus_1

IVa2__YP_009389489__red_squirrel_adenovirus_1__2773314

Identity

81.6 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› red_squirrel_adenovirus_1

TaxID: 2773314

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 137-384

PDB

Domain cluster: rep: LD_Run2_08_scaffold_35_prodigal-single.1__X__X__00177__D121-323

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02456.22 best	Adeno_IVa2	426.7	9.90e-128	100.0%	67.0%

D2 medium residues 63-123_396-424

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02456.22 best	Adeno_IVa2	28.2	1.20e-06	68.9%	15.1%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1s35A01	1.20.58.60	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.52	37.0	3.53e-01	73.3%	100.0%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4816472	5073.1.1.0 ↗	alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M	0.56	38.0	3.47e-01	73.3%	52.5%
3473668	4970.1.1.0 ↗	alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I	0.51	37.0	3.05e-01	75.6%	69.7%