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Ig7659_scaffold_8_prodigal-single.1__X__X__00025
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00025
Identity
- Kingdom:
- phage
Quality
66.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-69
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.68 | 44.0 | 3.02e-01 | 91.8% | 19.2% |
| 1ryp100 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.68 | 47.0 | 3.21e-01 | 73.8% | 45.0% |
| 2vy1A00 | 1.10.4180.10 | Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY | 0.66 | 46.0 | 3.32e-01 | 72.1% | 27.6% |
| 3f2bA05 | 6.10.50.10 | Special › Helix non-globular › Insulin-like, subunit E › | 0.64 | 43.0 | 4.73e-01 | 82.0% | 87.5% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.62 | 46.0 | 4.72e-01 | 80.3% | 85.0% |
| 2o36A02 | 1.10.1370.10 | Mainly Alpha › Orthogonal Bundle › Neurolysin; domain 3 › Neurolysin, domain 3 | 0.56 | 45.0 | 2.83e-01 | 93.4% | 34.1% |
| 1ni5A02 | 1.20.59.20 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › | 0.55 | 45.0 | 4.06e-01 | 91.8% | 93.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4542092 | 148.1.3.172 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 | 0.72 | 56.0 | 5.39e-01 | 85.2% | 94.3% |
| 3324221 | 148.1.1.57 ↗ | alpha arrays › Histone-like › Histone-related › Histone › AAA_lid_3 | 0.67 | 40.0 | 3.85e-01 | 83.6% | 52.9% |
| 5064927 | 3355.1.1.2 ↗ | alpha complex topology › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › dicarboxylate/sodium symporter › CitMHS | 0.67 | 50.0 | 2.94e-01 | 78.7% | 76.3% |
| 3186778 | 103.11.1.1 ↗ | alpha arrays › RuvA-C › RMI1 N-terminal helical domain-related › RMI1 N-terminal helical domain-related › RMI1_N_N | 0.67 | 48.0 | 4.97e-01 | 77.0% | 89.1% |
| 185853 | 4312.1.1.8 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › REGB_T4 | 0.67 | 52.0 | 3.89e-01 | 85.2% | 42.5% |
| 320075 | 632.6.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Plasmid maintenance system epsilon/zeta, antidote epsilon subunit › Epsilon_antitox | 0.65 | 48.0 | 4.17e-01 | 78.7% | 80.0% |
| 5062691 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.65 | 45.0 | 4.29e-01 | 75.4% | 93.3% |
| 3190607 | 6169.1.1.59 ↗ | extended segments › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › PLAC8 | 0.62 | 52.0 | 4.69e-01 | 95.1% | 71.8% |
| 3404603 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.60 | 52.0 | 3.00e-01 | 98.4% | 41.3% |
| 3276794 | 2006.1.4.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › XRN_N | 0.59 | 45.0 | 2.97e-01 | 82.0% | 51.8% |