Back to structures

Ig7659_scaffold_8_prodigal-single.1__X__X__00026

Bact-Vir

Ig7659_scaffold_8_prodigal-single.1__X__X__00026

Identity

Kingdom:
phage

Quality

84.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 17-76
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3weeB03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.52 36.0 2.99e-01 71.7% 95.7%
7rd0A02 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.50 37.0 2.42e-01 85.0% 92.5%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3163688 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.53 41.0 2.63e-01 91.7% 45.9%
4948108 210.1.3.3 a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 0.50 36.0 2.60e-01 78.3% 70.0%
3957811 2002.1.1.16 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.50 37.0 2.72e-01 88.3% 46.8%