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Ig7659_scaffold_8_prodigal-single.1__X__X__00051

Bact-Vir

Ig7659_scaffold_8_prodigal-single.1__X__X__00051

Identity

Kingdom:
phage

Quality

82.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-79
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3laeA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.74 38.0 3.70e-01 98.6% 44.4%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.72 57.0 4.14e-01 86.1% 36.2%
3askA02 2.30.30.1150 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 4.32e-01 84.7% 47.7%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.70 57.0 5.62e-01 88.9% 84.4%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 49.0 5.15e-01 75.0% 100.0%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 53.0 5.33e-01 83.3% 93.2%
2lccA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 53.0 5.21e-01 81.9% 90.8%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.68 56.0 5.60e-01 90.3% 93.1%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 5.01e-01 76.4% 98.0%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 52.0 5.53e-01 83.3% 100.0%
6s8zA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 51.0 5.51e-01 83.3% 100.0%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.66 48.0 5.16e-01 77.8% 95.0%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 46.0 4.82e-01 72.2% 100.0%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.30e-01 95.8% 100.0%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 5.25e-01 83.3% 92.4%
3m1uA01 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.65 50.0 3.82e-01 84.7% 51.5%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 5.28e-01 83.3% 100.0%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 5.01e-01 83.3% 94.2%
1khiA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.86e-01 83.3% 90.7%
2p13A00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.63 35.0 3.38e-01 98.6% 45.9%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 44.0 4.42e-01 76.4% 90.8%
1jlxA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.62 46.0 3.63e-01 80.6% 97.5%
2pliA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.62 35.0 3.38e-01 94.4% 47.6%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 39.0 4.42e-01 72.2% 100.0%
3cpfA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 47.0 4.88e-01 83.3% 92.3%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.20e-01 83.3% 73.0%
2oaiA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.61 35.0 3.44e-01 94.4% 50.0%
2o3gA00 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.60 34.0 3.42e-01 94.4% 52.6%
4c57B00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.59 40.0 2.68e-01 70.8% 27.9%
4b43A03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 52.0 4.50e-01 100.0% 78.3%
3a35A01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.59 45.0 4.18e-01 81.9% 87.0%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.56 38.0 2.49e-01 70.8% 21.8%
3s2kB01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.56 38.0 2.59e-01 72.2% 22.7%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.56 46.0 3.81e-01 100.0% 89.9%
1qh5A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 37.0 2.57e-01 70.8% 22.7%
2fvgA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.54 41.0 4.05e-01 81.9% 98.7%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.53 37.0 2.51e-01 72.2% 21.5%
6v04A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 36.0 3.12e-01 75.0% 81.1%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.51 39.0 3.17e-01 86.1% 88.2%
2h2yA01 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.51 42.0 3.73e-01 98.6% 96.6%
3tzuA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 38.0 3.28e-01 84.7% 97.6%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 34.0 2.94e-01 73.6% 78.4%
ECOD (77)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4950396 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 56.0 6.36e-01 79.2% 92.7%
3826545 4.1.1.158 beta barrels › SH3 › SH3 › SH3 › DUF3444 0.80 67.0 5.84e-01 90.3% 95.2%
4182977 4.1.1.297 beta barrels › SH3 › SH3 › SH3 › YajC 0.78 54.0 5.87e-01 83.3% 86.7%
4950806 4.6.1.8 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › WH_Lhr 0.77 42.0 4.70e-01 93.1% 69.1%
4028731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 57.0 5.96e-01 79.2% 100.0%
3480597 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 65.0 5.83e-01 95.8% 93.0%
3589730 4.1.1.252 beta barrels › SH3 › SH3 › SH3 › MdcG_N 0.74 58.0 5.58e-01 83.3% 98.8%
4601386 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 49.0 5.78e-01 76.4% 100.0%
3174446 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.73 52.0 3.25e-01 73.6% 31.5%
3583296 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.73 51.0 5.17e-01 72.2% 95.7%
3603357 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 53.0 5.94e-01 80.6% 100.0%
3214131 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 61.0 5.89e-01 88.9% 95.0%
3582034 206.1.1.72 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Pkinase_fungal 0.72 53.0 3.36e-01 76.4% 26.8%
3926768 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.72 53.0 3.36e-01 76.4% 27.1%
3932484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 55.0 5.80e-01 80.6% 100.0%
3789126 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.72 49.0 3.03e-01 70.8% 27.6%
4931822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.67e-01 81.9% 87.7%
5017214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 51.0 5.76e-01 80.6% 98.2%
4968500 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.72 44.0 4.71e-01 83.3% 71.4%
3926120 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.72 54.0 4.33e-01 81.9% 45.5%
3964422 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.71 54.0 4.13e-01 80.6% 37.5%
3710027 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.71 52.0 4.27e-01 76.4% 68.5%
4953223 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.71 48.0 5.50e-01 73.6% 100.0%
3576235 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 53.0 5.22e-01 77.8% 93.3%
4999430 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.71 55.0 4.68e-01 84.7% 53.3%
3960335 239.1.1.0 beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like 0.71 44.0 4.47e-01 80.6% 64.3%
3240933 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.71 51.0 3.18e-01 75.0% 24.5%
3933549 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.71 52.0 3.27e-01 77.8% 26.1%
5055961 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 56.0 5.41e-01 86.1% 88.7%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 49.0 5.38e-01 73.6% 98.3%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 4.15e-01 93.1% 44.0%
3234820 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.70 48.0 3.03e-01 72.2% 91.1%
3211944 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.69 51.0 3.22e-01 77.8% 24.3%
3268856 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 50.0 3.25e-01 76.4% 27.5%
3790784 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 46.0 3.13e-01 72.2% 18.9%
3624698 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.69 50.0 3.16e-01 76.4% 25.7%
3797513 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.69 51.0 3.27e-01 77.8% 29.4%
3957249 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.40e-01 73.6% 98.2%
3901366 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.68 48.0 3.05e-01 73.6% 25.9%
3742605 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.68 49.0 3.17e-01 76.4% 29.9%
3773541 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.68 50.0 3.16e-01 76.4% 26.2%
3931872 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.68 49.0 3.15e-01 76.4% 33.8%
3991896 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 54.0 4.90e-01 86.1% 81.1%
3275302 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 51.0 4.93e-01 80.6% 76.2%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.67 47.0 4.60e-01 73.6% 81.2%
5020252 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 52.0 4.44e-01 84.7% 55.8%
4010317 4.1.1.395 beta barrels › SH3 › SH3 › SH3 › PF27398 0.67 52.0 5.43e-01 86.1% 92.3%
3566631 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.67 47.0 4.52e-01 72.2% 80.0%
4002526 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.67 49.0 3.17e-01 77.8% 26.4%
3624495 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.67 48.0 3.10e-01 76.4% 26.3%
4269820 3820.1.1.1 a+b complex topology › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › CRISPR-associated endonuclease Cas9 C-terminal domain › Cas9_PI 0.67 51.0 3.86e-01 83.3% 95.0%
3482359 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 58.0 5.01e-01 95.8% 98.2%
3500084 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.69e-01 72.2% 97.1%
3235142 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 48.0 3.02e-01 76.4% 26.3%
3558025 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 48.0 3.08e-01 76.4% 25.8%
3213571 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.66 48.0 3.07e-01 76.4% 25.8%
3935325 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.66 46.0 2.96e-01 72.2% 27.7%
5044373 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 51.0 5.45e-01 84.7% 100.0%
3629867 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.65 48.0 3.07e-01 77.8% 24.9%
3637868 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.65 55.0 4.31e-01 94.4% 97.4%
4256943 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.64 50.0 4.09e-01 86.1% 45.0%
3631298 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 49.0 4.88e-01 81.9% 93.3%
3938415 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.64 43.0 4.55e-01 70.8% 100.0%
3619978 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.64 45.0 2.90e-01 75.0% 25.5%
3928323 4.27.1.1 beta barrels › SH3 › Mitoribosomal protein mS34 › Mitoribosomal protein mS34 › MRP-S34 0.63 55.0 4.07e-01 98.6% 49.5%
3515869 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 44.0 2.81e-01 73.6% 26.0%
3360714 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.63 44.0 2.82e-01 72.2% 36.1%
3990732 4.1.1.309 beta barrels › SH3 › SH3 › SH3 › MRP-S34 0.62 54.0 5.02e-01 100.0% 96.8%
2429140 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 43.0 2.76e-01 76.4% 25.7%
3797703 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.59 41.0 2.69e-01 72.2% 18.4%
4166205 1.1.7.50 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 0.59 52.0 4.53e-01 100.0% 82.7%
3626637 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 41.0 2.72e-01 75.0% 33.5%
4000858 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.57 47.0 4.75e-01 88.9% 100.0%
3909833 206.1.1.87 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, RIO1 0.55 39.0 2.64e-01 76.4% 27.5%
3940393 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 38.0 2.25e-01 80.6% 46.9%
3975862 220.1.1.104 beta barrels › PH domain-like › PH domain-like › PH domain-like › Cpta_toxin 0.52 35.0 3.45e-01 72.2% 82.5%
5028386 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.50 35.0 2.70e-01 75.0% 47.6%