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Ig7659_scaffold_8_prodigal-single.1__X__X__00079

Bact-Vir

Ig7659_scaffold_8_prodigal-single.1__X__X__00079

Identity

Kingdom:
phage

Quality

87.3 mean pLDDT

Cluster

View cluster (12 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 43-176
PDB
Domain cluster: rep: IMGVR_UViG_3300021509_000003-3300021509-Ga0190304_100009151__D537-667
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00188.33 best CAP 49.0 1.50e-12 90.3% 83.2%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ifaA01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.91 82.0 6.22e-01 100.0% 44.8%
4d53A00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.88 79.0 8.00e-01 98.5% 94.0%
4h0aA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.88 73.0 5.49e-01 100.0% 39.7%
5vhgA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.78 74.0 7.06e-01 100.0% 87.3%
3nt8A01 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.74 70.0 6.05e-01 100.0% 77.2%
4tpvA00 3.40.33.10 Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP 0.71 68.0 5.98e-01 100.0% 73.6%
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 25.0 3.00e-01 72.4% 56.5%
3mzoB00 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.55 42.0 3.65e-01 81.3% 78.1%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.50 28.0 3.00e-01 83.6% 61.5%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968107 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.94 91.0 8.96e-01 100.0% 100.0%
1031145 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.91 82.0 8.31e-01 100.0% 94.0%
3273660 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.89 85.0 7.40e-01 100.0% 96.8%
3248692 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.89 85.0 7.45e-01 100.0% 91.9%
1697211 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.88 79.0 8.00e-01 98.5% 94.0%
3963099 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.88 81.0 8.15e-01 97.8% 94.8%
224049 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.88 73.0 7.68e-01 100.0% 95.1%
3974333 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.87 72.0 7.66e-01 100.0% 96.6%
4031162 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.87 81.0 8.26e-01 99.3% 99.2%
3952808 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.86 82.0 8.19e-01 100.0% 97.8%
4942971 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.85 82.0 7.47e-01 100.0% 100.0%
5029848 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.85 82.0 7.40e-01 100.0% 81.2%
3278331 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.85 82.0 7.96e-01 100.0% 99.3%
5015571 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.84 80.0 7.61e-01 98.5% 99.3%
3283186 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.84 81.0 7.85e-01 100.0% 92.4%
4929542 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.83 80.0 7.59e-01 100.0% 98.1%
4991163 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.83 78.0 7.03e-01 97.8% 82.9%
3964094 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.83 76.0 7.26e-01 95.5% 92.0%
3267592 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 69.0 6.57e-01 88.1% 98.1%
5022449 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.82 68.0 5.71e-01 100.0% 55.2%
5084002 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.81 76.0 7.64e-01 99.3% 97.8%
5008575 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.79 75.0 7.44e-01 100.0% 96.4%
3309625 273.1.1.4 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF25884 0.77 69.0 7.07e-01 94.8% 98.5%
3662594 273.1.1.4 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF25884 0.76 72.0 6.90e-01 100.0% 90.7%
3837302 273.1.1.4 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › PF25884 0.75 70.0 6.74e-01 99.3% 91.3%
3588250 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.74 69.0 6.62e-01 100.0% 95.3%
3923139 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.72 64.0 6.27e-01 98.5% 86.9%
3696502 273.1.1.1 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP 0.71 67.0 6.75e-01 100.0% 98.5%
3936410 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.71 66.0 5.67e-01 100.0% 65.3%
3935972 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.71 66.0 6.02e-01 100.0% 76.5%
5012996 273.1.1.0 ↗ a+b three layers › PR-1-like › PR-1-like › PR-1-like 0.62 48.0 5.22e-01 100.0% 96.5%
3308738 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 29.0 2.87e-01 98.5% 42.8%