←Back to structures
Ig7659_scaffold_8_prodigal-single.1__X__X__00123
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00123
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-43_98-191
Domain cluster:
rep: SR-VP_0-2_scaffold_141_2510002_prodigal-single.1__X__X__00086__D1-125
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF11416.14 best | Syntaxin-5_N | 18.1 | 1.70e-03 | 10.8% | 60.9% |
D2
medium
residues 49-90
Domain cluster:
representative
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k7iA01 | 3.30.160.160 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YegP-like | 0.82 | 72.0 | 6.97e-01 | 100.0% | 87.5% |
| 2k49A00 | 2.30.29.80 | Mainly Beta › Roll › PH-domain like › | 0.76 | 64.0 | 4.73e-01 | 100.0% | 35.6% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.67 | 52.0 | 4.14e-01 | 100.0% | 41.1% |
| 4a7kA03 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.66 | 47.0 | 3.28e-01 | 81.0% | 33.5% |
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.66 | 46.0 | 4.44e-01 | 97.6% | 62.0% |
| 2mdiA00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.64 | 43.0 | 4.04e-01 | 100.0% | 53.6% |
| 2v90C00 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.64 | 53.0 | 4.23e-01 | 100.0% | 60.2% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.64 | 44.0 | 3.38e-01 | 73.8% | 32.1% |
| 5fl3A01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 44.0 | 3.39e-01 | 73.8% | 32.0% |
| 3vpbE00 | 2.20.28.160 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.63 | 43.0 | 3.99e-01 | 90.5% | 55.4% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.63 | 48.0 | 4.25e-01 | 100.0% | 54.5% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.62 | 44.0 | 2.96e-01 | 81.0% | 40.6% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 47.0 | 2.88e-01 | 97.6% | 20.9% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 40.0 | 3.67e-01 | 71.4% | 61.9% |
| 3f2bA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 49.0 | 3.90e-01 | 100.0% | 76.0% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 48.0 | 2.99e-01 | 100.0% | 25.0% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 45.0 | 4.09e-01 | 100.0% | 62.9% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.58 | 43.0 | 3.68e-01 | 100.0% | 45.1% |
| 2gk6A02 | 2.40.30.230 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.58 | 47.0 | 3.94e-01 | 100.0% | 89.2% |
| 1sjiA03 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 44.0 | 3.43e-01 | 100.0% | 78.2% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.57 | 44.0 | 3.25e-01 | 97.6% | 28.8% |
| 1g5hA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.57 | 39.0 | 2.47e-01 | 76.2% | 44.6% |
| 1l3aA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.57 | 45.0 | 3.14e-01 | 97.6% | 27.7% |
| 2lmcB00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 46.0 | 4.21e-01 | 100.0% | 80.3% |
| 3dcxA00 | 2.30.29.50 | Mainly Beta › Roll › PH-domain like › Bacterial Pleckstrin homology domain | 0.55 | 42.0 | 3.32e-01 | 100.0% | 37.6% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.55 | 38.0 | 3.43e-01 | 73.8% | 47.0% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.55 | 43.0 | 2.78e-01 | 100.0% | 82.3% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.55 | 41.0 | 3.16e-01 | 100.0% | 31.1% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.55 | 38.0 | 3.72e-01 | 76.2% | 75.0% |
| 3ewaA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 41.0 | 2.63e-01 | 85.7% | 14.9% |
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.55 | 41.0 | 3.64e-01 | 100.0% | 53.9% |
| 6qcbA00 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.54 | 37.0 | 2.97e-01 | 71.4% | 46.4% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 40.0 | 3.13e-01 | 100.0% | 49.2% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.54 | 44.0 | 3.01e-01 | 100.0% | 87.8% |
| 1o97D01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 40.0 | 2.76e-01 | 97.6% | 20.1% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.54 | 39.0 | 3.62e-01 | 100.0% | 60.6% |
| 1uyjA01 | 3.30.360.60 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › | 0.53 | 37.0 | 3.05e-01 | 73.8% | 37.8% |
| 3dghA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 39.0 | 3.01e-01 | 100.0% | 30.1% |
| 1x0tA02 | 6.20.50.20 | Special › Other non-globular › N-terminal domain of TfIIb › | 0.53 | 37.0 | 3.68e-01 | 73.8% | 73.3% |
| 3r7wB02 | 3.30.450.190 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.53 | 39.0 | 3.15e-01 | 100.0% | 37.3% |
| 6k5gA01 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.52 | 43.0 | 2.75e-01 | 100.0% | 73.0% |
| 2qrdB01 | 2.20.25.290 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.52 | 35.0 | 3.65e-01 | 76.2% | 91.9% |
| 1v73A00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.52 | 40.0 | 2.49e-01 | 100.0% | 13.6% |
| 1a15A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 39.0 | 3.52e-01 | 100.0% | 56.7% |
| 2v8qB00 | 6.20.250.60 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.51 | 36.0 | 3.11e-01 | 76.2% | 45.2% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.51 | 40.0 | 3.01e-01 | 92.9% | 34.1% |
| 1auvB02 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 39.0 | 2.99e-01 | 90.5% | 54.3% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 39.0 | 2.99e-01 | 100.0% | 60.3% |
| 2nlkA02 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 39.0 | 2.51e-01 | 95.2% | 73.8% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.50 | 37.0 | 3.02e-01 | 92.9% | 68.9% |
| 6yiiA01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.50 | 38.0 | 2.57e-01 | 100.0% | 72.2% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 40.0 | 3.85e-01 | 100.0% | 83.3% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3974688 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.84 | 74.0 | 6.96e-01 | 97.6% | 82.0% |
| 4188237 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.82 | 71.0 | 6.56e-01 | 100.0% | 76.4% |
| 4243634 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.82 | 72.0 | 5.92e-01 | 100.0% | 56.0% |
| 3284714 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.81 | 71.0 | 6.25e-01 | 100.0% | 66.7% |
| 4341865 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.81 | 69.0 | 6.35e-01 | 100.0% | 74.5% |
| 4345436 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.79 | 68.0 | 5.69e-01 | 100.0% | 56.0% |
| 5075465 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.79 | 68.0 | 6.11e-01 | 100.0% | 70.0% |
| 3222570 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.79 | 62.0 | 4.55e-01 | 100.0% | 32.2% |
| 4297945 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.78 | 67.0 | 6.25e-01 | 100.0% | 76.4% |
| 7726 | 4325.1.1.1 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF1508 | 0.76 | 65.0 | 5.91e-01 | 100.0% | 72.4% |
| 3781077 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.75 | 52.0 | 3.92e-01 | 73.8% | 31.1% |
| 3831192 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.74 | 64.0 | 5.11e-01 | 97.6% | 48.2% |
| 4929725 | 375.1.1.289 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 | 0.74 | 50.0 | 4.94e-01 | 71.4% | 66.7% |
| 3247407 | 220.1.1.50 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 | 0.72 | 61.0 | 4.45e-01 | 100.0% | 33.6% |
| 3425673 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.72 | 59.0 | 5.68e-01 | 97.6% | 82.0% |
| 4379563 | 375.1.1.289 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF5679 | 0.72 | 51.0 | 5.04e-01 | 76.2% | 71.1% |
| 3514864 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.70 | 47.0 | 4.37e-01 | 73.8% | 54.5% |
| 3940690 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 47.0 | 3.61e-01 | 73.8% | 29.5% |
| 3306595 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.68 | 55.0 | 3.66e-01 | 90.5% | 88.6% |
| 3394097 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.68 | 51.0 | 4.08e-01 | 100.0% | 38.0% |
| 3483506 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.68 | 60.0 | 4.05e-01 | 100.0% | 40.6% |
| 4179811 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.67 | 45.0 | 4.63e-01 | 73.8% | 72.5% |
| 3714496 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.67 | 47.0 | 3.05e-01 | 73.8% | 16.8% |
| 3626785 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.67 | 54.0 | 3.59e-01 | 92.9% | 89.4% |
| 3699899 | 214.1.1.6 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2_2 | 0.65 | 53.0 | 3.96e-01 | 100.0% | 53.3% |
| 3231587 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 54.0 | 4.34e-01 | 100.0% | 53.3% |
| 3670690 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 56.0 | 3.25e-01 | 100.0% | 37.6% |
| 3260733 | 220.1.1.158 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_LRR1 | 0.64 | 49.0 | 3.64e-01 | 85.7% | 69.1% |
| 3232445 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 43.0 | 3.91e-01 | 71.4% | 50.0% |
| 3783916 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.63 | 47.0 | 4.45e-01 | 100.0% | 67.3% |
| 3178289 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.63 | 49.0 | 2.92e-01 | 97.6% | 10.8% |
| 3925738 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 48.0 | 3.73e-01 | 100.0% | 35.5% |
| None | — | 0.61 | 49.0 | 3.02e-01 | 100.0% | 19.4% | |
| 3965157 | 2003.1.2.58 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 | 0.61 | 44.0 | 2.98e-01 | 100.0% | 18.4% |
| 3419793 | 5.1.10.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 | 0.61 | 51.0 | 3.55e-01 | 100.0% | 28.9% |
| 3964837 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.60 | 48.0 | 4.20e-01 | 100.0% | 64.0% |
| 3313861 | 4325.1.1.10 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › DUF659 | 0.60 | 50.0 | 4.69e-01 | 100.0% | 78.2% |
| 3225123 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.60 | 45.0 | 4.48e-01 | 100.0% | 80.0% |
| 3933098 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 46.0 | 4.13e-01 | 97.6% | 58.5% |
| 4945985 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.59 | 49.0 | 3.42e-01 | 100.0% | 40.6% |
| 1387073 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.59 | 40.0 | 3.25e-01 | 76.2% | 33.0% |
| 3387410 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 48.0 | 3.59e-01 | 100.0% | 34.8% |
| 3658860 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 45.0 | 2.97e-01 | 92.9% | 26.8% |
| 3606500 | 375.8.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B | 0.59 | 45.0 | 4.16e-01 | 90.5% | 65.0% |
| 3670687 | 389.1.1.37 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › GUB_WAK_bind | 0.59 | 41.0 | 2.88e-01 | 100.0% | 21.3% |
| 3964724 | 3675.1.1.1 ↗ | a+b complex topology › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › DNA gyrase subunit B insertion domain › GyrB_insert | 0.59 | 48.0 | 3.36e-01 | 100.0% | 100.0% |
| 3422058 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.59 | 47.0 | 3.00e-01 | 100.0% | 29.2% |
| 3930177 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.58 | 46.0 | 2.84e-01 | 100.0% | 85.6% |
| 3327232 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.58 | 47.0 | 2.89e-01 | 100.0% | 15.4% |
| 3514660 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.58 | 45.0 | 3.69e-01 | 100.0% | 43.3% |
| 3342974 | 2484.1.1.106 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF659 | 0.58 | 43.0 | 3.73e-01 | 100.0% | 54.4% |
| 3209694 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 47.0 | 3.69e-01 | 100.0% | 41.0% |
| 3536554 | 77.1.1.2 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › FAM194 | 0.57 | 39.0 | 3.08e-01 | 71.4% | 34.7% |
| 3499345 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.57 | 42.0 | 3.67e-01 | 100.0% | 48.2% |
| 3959920 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.57 | 48.0 | 3.59e-01 | 100.0% | 39.1% |
| 3408937 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.56 | 42.0 | 3.63e-01 | 95.2% | 48.8% |
| 3697241 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.56 | 42.0 | 4.11e-01 | 100.0% | 98.1% |
| 3907024 | 260.1.1.1 ↗ | a+b duplicates or obligate multimers › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › beta-hairpin-alpha-hairpin repeat › Plectin | 0.56 | 48.0 | 2.88e-01 | 100.0% | 14.1% |
| 4958522 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.55 | 42.0 | 3.84e-01 | 100.0% | 60.0% |
| 4253165 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.55 | 44.0 | 3.22e-01 | 97.6% | 40.7% |
| 4238204 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.55 | 46.0 | 3.56e-01 | 100.0% | 66.7% |
| 4975535 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.55 | 42.0 | 3.66e-01 | 100.0% | 53.8% |
| 3702281 | 375.8.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta | 0.54 | 41.0 | 3.91e-01 | 90.5% | 70.9% |
| 3461521 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 42.0 | 3.31e-01 | 100.0% | 36.5% |
| 4980908 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 40.0 | 2.83e-01 | 97.6% | 22.6% |
| 3434453 | 252.1.1.0 ↗ | a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD | 0.54 | 42.0 | 4.34e-01 | 88.1% | 97.4% |
| 3282699 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.54 | 46.0 | 3.46e-01 | 100.0% | 39.1% |
| 4271291 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 3.81e-01 | 100.0% | 60.0% |
| 4961843 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.54 | 41.0 | 2.73e-01 | 97.6% | 19.6% |
| 5022840 | 318.1.1.1 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal_L6 | 0.53 | 43.0 | 3.63e-01 | 100.0% | 75.3% |
| 4278743 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.53 | 44.0 | 3.41e-01 | 100.0% | 62.7% |
| 3204558 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.53 | 41.0 | 2.91e-01 | 97.6% | 62.4% |
| 3388887 | 4.8.1.2 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow | 0.53 | 44.0 | 3.88e-01 | 100.0% | 61.5% |
| 3726946 | 708.1.2.6 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › GFA | 0.52 | 40.0 | 3.05e-01 | 92.9% | 33.0% |
| 4137634 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 43.0 | 3.44e-01 | 100.0% | 52.6% |
| 3605369 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 41.0 | 3.94e-01 | 100.0% | 96.4% |
| 4943922 | 2005.1.1.122 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF_alpha | 0.52 | 40.0 | 2.73e-01 | 97.6% | 19.0% |
| 4203291 | 3256.1.1.2 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain › eIF3g | 0.52 | 36.0 | 3.74e-01 | 76.2% | 94.3% |
| 3503654 | 604.1.1.1 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin | 0.51 | 43.0 | 3.19e-01 | 100.0% | 76.7% |
| 4297075 | 286.1.1.1 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › DAP_epimerase | 0.51 | 43.0 | 3.09e-01 | 100.0% | 71.9% |
| 3260369 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.50 | 40.0 | 4.00e-01 | 100.0% | 86.7% |
| 3369818 | 325.1.7.3 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › Apocytochr_F_C | 0.50 | 41.0 | 3.70e-01 | 100.0% | 67.7% |