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Ig7659_scaffold_8_prodigal-single.1__X__X__00160
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00160
Identity
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-50
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rbyA02 | 2.40.128.310 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, C-terminal domain | 0.62 | 54.0 | 4.39e-01 | 100.0% | 93.7% |
| 2d69B01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.61 | 52.0 | 3.95e-01 | 100.0% | 77.8% |
| 2kgjA00 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.59 | 48.0 | 3.94e-01 | 100.0% | 84.3% |
| 2pjyC00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 46.0 | 4.11e-01 | 100.0% | 60.8% |
| 5dm6100 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.57 | 44.0 | 4.38e-01 | 95.9% | 83.3% |
| 1fbnA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 34.0 | 3.45e-01 | 93.9% | 58.8% |
| 1r8gA00 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.56 | 47.0 | 2.87e-01 | 100.0% | 29.5% |
| 3w3sA01 | 3.30.70.1920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 47.0 | 3.31e-01 | 100.0% | 59.5% |
| 4g2sA00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.54 | 43.0 | 3.58e-01 | 100.0% | 95.3% |
| 4csqA00 | 2.30.29.190 | Mainly Beta › Roll › PH-domain like › | 0.53 | 42.0 | 3.42e-01 | 98.0% | 83.2% |
| 2kx2A00 | 3.30.780.30 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › | 0.53 | 38.0 | 3.18e-01 | 81.6% | 72.9% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.53e-01 | 98.0% | 78.4% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.47e-01 | 100.0% | 69.9% |
| 4iufA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.51 | 42.0 | 3.76e-01 | 100.0% | 96.1% |
| 2e1vA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.51 | 42.0 | 2.80e-01 | 98.0% | 32.2% |
| 2hiyA02 | 3.30.70.1260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › bacterial protein sp0830 like | 0.50 | 41.0 | 3.51e-01 | 100.0% | 75.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3700022 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.80 | 71.0 | 5.53e-01 | 100.0% | 76.2% |
| 3596847 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.80 | 71.0 | 5.49e-01 | 100.0% | 76.2% |
| 3596842 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.78 | 69.0 | 5.18e-01 | 100.0% | 70.8% |
| 3243669 | 4076.2.1.0 ↗ | a+b two layers › L9 N-domain-like › MbtH-like › MbtH-like | 0.78 | 62.0 | 5.79e-01 | 100.0% | 71.7% |
| 3609858 | 220.1.1.14 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom | 0.77 | 68.0 | 5.28e-01 | 100.0% | 81.0% |
| 3627951 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 67.0 | 5.41e-01 | 100.0% | 83.2% |
| 3243787 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 67.0 | 5.48e-01 | 100.0% | 86.7% |
| 4039738 | 284.1.1.4 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › GreA_GreB | 0.73 | 65.0 | 5.51e-01 | 100.0% | 76.2% |
| 3393983 | 220.1.1.86 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N | 0.73 | 65.0 | 4.99e-01 | 100.0% | 63.6% |
| 3415886 | 220.1.1.146 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N | 0.73 | 63.0 | 5.33e-01 | 100.0% | 85.9% |
| 3601857 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.73 | 65.0 | 5.28e-01 | 100.0% | 95.6% |
| 3589291 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.68 | 59.0 | 4.66e-01 | 100.0% | 46.7% |
| 4990489 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 58.0 | 5.81e-01 | 100.0% | 94.0% |
| 5083631 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.67 | 57.0 | 5.00e-01 | 98.0% | 73.3% |
| 5070047 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.66 | 56.0 | 5.30e-01 | 98.0% | 91.7% |
| 5025277 | 284.1.1.13 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP-like_N | 0.64 | 55.0 | 5.34e-01 | 98.0% | 96.4% |
| 4014784 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.63 | 53.0 | 4.37e-01 | 100.0% | 98.0% |
| 3188851 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.63 | 53.0 | 4.19e-01 | 100.0% | 98.2% |
| 3696332 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.62 | 51.0 | 3.89e-01 | 100.0% | 97.8% |
| 5059211 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.61 | 51.0 | 4.86e-01 | 98.0% | 90.0% |
| 3729312 | 9.14.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W › HRI1 | 0.60 | 50.0 | 4.00e-01 | 100.0% | 100.0% |
| 3349066 | 11.1.7.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › PEBP-like › PBP | 0.59 | 43.0 | 2.97e-01 | 79.6% | 52.4% |
| 3795979 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.58 | 50.0 | 4.11e-01 | 100.0% | 77.9% |
| 3930427 | 4357.1.1.0 ↗ | beta barrels › WWE domain › WWE domain › WWE domain | 0.57 | 48.0 | 4.44e-01 | 100.0% | 73.8% |
| 3623399 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.56 | 43.0 | 3.87e-01 | 100.0% | 60.0% |
| 3936048 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 45.0 | 3.81e-01 | 100.0% | 79.6% |
| 3798285 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 46.0 | 4.03e-01 | 100.0% | 90.0% |
| 4936518 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.54 | 44.0 | 3.96e-01 | 100.0% | 94.7% |
| 5082182 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.54 | 45.0 | 3.72e-01 | 100.0% | 91.6% |
| 5062701 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.53 | 45.0 | 3.61e-01 | 100.0% | 80.0% |
| 3914736 | 4357.1.1.1 ↗ | beta barrels › WWE domain › WWE domain › WWE domain › WWE | 0.52 | 42.0 | 3.94e-01 | 100.0% | 96.9% |
| 4989477 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.51 | 43.0 | 3.75e-01 | 100.0% | 96.2% |
| 3716500 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 37.0 | 2.98e-01 | 83.7% | 91.8% |
| 4957085 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.50 | 44.0 | 4.02e-01 | 100.0% | 81.5% |
| 3925496 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 40.0 | 3.47e-01 | 100.0% | 81.1% |
| 5046992 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.50 | 40.0 | 3.44e-01 | 98.0% | 92.2% |