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Ig7659_scaffold_8_prodigal-single.1__X__X__00166
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00166
Identity
- Kingdom:
- phage
Quality
79.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 118-192
Domain cluster:
representative
CATH (41)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m1gB03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 53.0 | 5.68e-01 | 96.0% | 84.1% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 50.0 | 5.78e-01 | 93.3% | 98.1% |
| 6c6sD02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 51.0 | 5.54e-01 | 96.0% | 86.7% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 51.0 | 5.44e-01 | 81.3% | 84.8% |
| 1ib8A02 | 2.30.30.180 | Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain | 0.72 | 51.0 | 5.37e-01 | 96.0% | 83.6% |
| 1mhnA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 50.0 | 5.57e-01 | 88.0% | 93.2% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 48.0 | 5.37e-01 | 96.0% | 93.0% |
| 2ettA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.68 | 48.0 | 4.02e-01 | 73.3% | 63.3% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.68 | 49.0 | 3.81e-01 | 76.0% | 71.4% |
| 2v14A00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.66 | 48.0 | 3.97e-01 | 77.3% | 59.7% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 47.0 | 4.96e-01 | 84.0% | 87.7% |
| 2k4yA00 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.65 | 54.0 | 5.19e-01 | 96.0% | 77.9% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 48.0 | 5.12e-01 | 85.3% | 93.7% |
| 1c5kA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 45.0 | 3.02e-01 | 72.0% | 28.2% |
| 3p8bB02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 44.0 | 4.71e-01 | 96.0% | 87.1% |
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 38.0 | 4.05e-01 | 70.7% | 67.2% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.63 | 44.0 | 4.44e-01 | 72.0% | 87.8% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 45.0 | 4.42e-01 | 96.0% | 71.1% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.61 | 46.0 | 4.06e-01 | 81.3% | 73.9% |
| 2egcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 47.0 | 4.70e-01 | 98.7% | 82.7% |
| 3pmiA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 44.0 | 4.61e-01 | 77.3% | 89.2% |
| 1e8oD00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.60 | 42.0 | 4.28e-01 | 76.0% | 86.8% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 42.0 | 3.99e-01 | 74.7% | 70.3% |
| 2cm4A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 46.0 | 3.79e-01 | 86.7% | 85.5% |
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.59 | 41.0 | 4.31e-01 | 88.0% | 83.3% |
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 41.0 | 4.44e-01 | 85.3% | 93.5% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.57 | 36.0 | 3.94e-01 | 72.0% | 80.3% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.57 | 49.0 | 4.05e-01 | 98.7% | 96.4% |
| 1ztxE00 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 42.0 | 3.87e-01 | 81.3% | 94.1% |
| 4gq1A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 49.0 | 3.20e-01 | 100.0% | 91.4% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.55 | 44.0 | 3.98e-01 | 88.0% | 87.6% |
| 2lezA00 | 3.30.2450.10 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › Secreted effector protein pipB2 | 0.55 | 38.0 | 3.32e-01 | 73.3% | 80.8% |
| 7esdB01 | 2.60.40.350 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 39.0 | 3.71e-01 | 76.0% | 93.5% |
| 2ntkB00 | 3.60.20.20 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like | 0.54 | 39.0 | 2.97e-01 | 80.0% | 99.5% |
| 1zsqA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 46.0 | 4.24e-01 | 100.0% | 92.1% |
| 3tqmA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.53 | 38.0 | 3.66e-01 | 77.3% | 86.7% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 41.0 | 3.55e-01 | 89.3% | 97.6% |
| 1imuA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.51 | 37.0 | 3.38e-01 | 78.7% | 72.0% |
| 2ywqA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.51 | 37.0 | 3.58e-01 | 78.7% | 87.5% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 44.0 | 3.79e-01 | 100.0% | 72.6% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.51 | 43.0 | 3.66e-01 | 96.0% | 97.6% |
ECOD (63)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3924617 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.76 | 52.0 | 4.62e-01 | 89.3% | 50.5% |
| 3879653 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.73 | 54.0 | 5.55e-01 | 98.7% | 82.9% |
| 3440094 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.73 | 52.0 | 5.69e-01 | 100.0% | 91.7% |
| 3392130 | 4.1.1.223 ↗ | beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st | 0.73 | 55.0 | 5.87e-01 | 100.0% | 93.8% |
| 4168737 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 52.0 | 5.31e-01 | 97.3% | 79.7% |
| 4141828 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.70 | 52.0 | 5.32e-01 | 97.3% | 79.7% |
| 5042892 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.69 | 47.0 | 5.18e-01 | 96.0% | 88.3% |
| 4932609 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 49.0 | 5.22e-01 | 100.0% | 86.2% |
| 4547801 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 49.0 | 4.61e-01 | 86.7% | 63.3% |
| 5051313 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 47.0 | 5.04e-01 | 96.0% | 86.2% |
| 3508531 | 809.2.1.0 ↗ | a+b two layers › BLIP-like › BT0923-like › BT0923-like | 0.65 | 41.0 | 4.73e-01 | 73.3% | 94.0% |
| 3672898 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.65 | 45.0 | 3.79e-01 | 72.0% | 95.2% |
| 4984882 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.65 | 47.0 | 4.85e-01 | 88.0% | 81.4% |
| 4528719 | 4.1.1.438 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27440 | 0.64 | 50.0 | 5.32e-01 | 86.7% | 96.9% |
| 3251940 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.63 | 47.0 | 4.77e-01 | 100.0% | 80.0% |
| 5000498 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.63 | 45.0 | 4.90e-01 | 76.0% | 95.0% |
| 4173773 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.62 | 44.0 | 4.23e-01 | 73.3% | 73.8% |
| 5012513 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.62 | 42.0 | 3.56e-01 | 72.0% | 60.0% |
| 3930705 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.62 | 48.0 | 4.41e-01 | 85.3% | 78.0% |
| 4930470 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.61 | 43.0 | 4.15e-01 | 73.3% | 71.8% |
| 3656401 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 5.03e-01 | 100.0% | 89.3% |
| 3408101 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.61 | 44.0 | 3.71e-01 | 77.3% | 57.8% |
| 4087011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 50.0 | 4.66e-01 | 96.0% | 70.5% |
| 3507003 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.61 | 53.0 | 5.39e-01 | 100.0% | 96.0% |
| 5063609 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 42.0 | 3.81e-01 | 73.3% | 87.0% |
| 4581970 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.61 | 42.0 | 3.53e-01 | 73.3% | 45.1% |
| 5049477 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 44.0 | 4.84e-01 | 81.3% | 95.0% |
| 4118011 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.60 | 50.0 | 4.80e-01 | 96.0% | 80.0% |
| 4459163 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.60 | 42.0 | 3.56e-01 | 73.3% | 48.0% |
| 5015458 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.60 | 40.0 | 3.96e-01 | 76.0% | 65.0% |
| 3996907 | 2.1.1.27 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rpb8 | 0.59 | 43.0 | 3.58e-01 | 76.0% | 89.9% |
| 4942967 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 41.0 | 3.47e-01 | 73.3% | 59.2% |
| 4983766 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.59 | 42.0 | 3.65e-01 | 76.0% | 49.6% |
| 5077089 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 43.0 | 4.49e-01 | 78.7% | 87.1% |
| 4975478 | 4.1.1.40 ↗ | beta barrels › SH3 › SH3 › SH3 › FeoA | 0.58 | 51.0 | 4.89e-01 | 96.0% | 87.1% |
| 4010681 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.58 | 45.0 | 4.18e-01 | 88.0% | 66.3% |
| 3898370 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.58 | 42.0 | 4.64e-01 | 94.7% | 100.0% |
| 3598064 | 277.1.1.0 ↗ | a+b two layers › PX domain › PX domain › PX domain | 0.58 | 42.0 | 3.62e-01 | 78.7% | 90.4% |
| 3965386 | 2.4.1.6 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › CysA_C_terminal | 0.57 | 40.0 | 3.52e-01 | 74.7% | 47.5% |
| 3847592 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 52.0 | 3.15e-01 | 100.0% | 19.8% |
| 3587337 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.57 | 44.0 | 3.53e-01 | 85.3% | 42.0% |
| 3286982 | 330.6.1.0 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain | 0.57 | 40.0 | 3.67e-01 | 76.0% | 87.5% |
| 3280978 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.57 | 38.0 | 3.99e-01 | 72.0% | 75.7% |
| 4163661 | 4.1.1.446 ↗ | beta barrels › SH3 › SH3 › SH3 › PF30222 | 0.57 | 45.0 | 4.75e-01 | 88.0% | 98.5% |
| 3364063 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.56 | 48.0 | 4.01e-01 | 98.7% | 92.9% |
| 3427749 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.56 | 41.0 | 4.38e-01 | 85.3% | 90.8% |
| 4304505 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.56 | 41.0 | 3.46e-01 | 78.7% | 58.5% |
| 3387114 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.56 | 39.0 | 3.63e-01 | 73.3% | 65.3% |
| 5023892 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.55 | 41.0 | 3.48e-01 | 80.0% | 79.1% |
| 3408369 | 284.1.3.4 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK | 0.55 | 45.0 | 4.56e-01 | 89.3% | 90.7% |
| 3493361 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.54 | 41.0 | 3.52e-01 | 81.3% | 71.7% |
| 3243274 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 46.0 | 3.02e-01 | 96.0% | 30.0% |
| 3175837 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 42.0 | 3.40e-01 | 85.3% | 80.0% |
| 4269457 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 39.0 | 3.31e-01 | 80.0% | 74.6% |
| 4185547 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 44.0 | 4.28e-01 | 97.3% | 82.4% |
| 5007927 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 40.0 | 3.41e-01 | 84.0% | 73.7% |
| 3825245 | 5.1.3.149 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 | 0.53 | 42.0 | 2.72e-01 | 88.0% | 86.8% |
| 3978756 | 3197.1.1.1 ↗ | a+b two layers › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › N-terminal domain of effector protein PipB2 › PipB2_N | 0.53 | 39.0 | 3.45e-01 | 84.0% | 51.7% |
| 1260456 | 283.1.1.3 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase | 0.53 | 34.0 | 3.34e-01 | 72.0% | 59.8% |
| 4393617 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 36.0 | 3.07e-01 | 72.0% | 59.2% |
| 2641778 | 318.1.1.0 ↗ | a+b two layers › Ribosomal protein L6 › Ribosomal protein L6 › Ribosomal protein L6 | 0.52 | 35.0 | 3.42e-01 | 73.3% | 62.2% |
| 3832602 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.52 | 36.0 | 3.25e-01 | 74.7% | 65.5% |
| 3195088 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.50 | 43.0 | 2.58e-01 | 100.0% | 40.2% |
D2
high
residues 207-329
D3
high
residues 337-460
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.67 | 37.0 | 3.59e-01 | 82.3% | 47.4% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.65 | 36.0 | 3.61e-01 | 82.3% | 50.0% |
| 6cnzF00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.59 | 48.0 | 4.45e-01 | 96.0% | 68.4% |
| 2fp1B00 | 1.20.59.10 | Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase | 0.57 | 48.0 | 4.39e-01 | 98.4% | 69.5% |
| 4r8zA00 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.56 | 46.0 | 3.88e-01 | 90.3% | 77.5% |
| 5dicA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.56 | 33.0 | 3.45e-01 | 99.2% | 61.7% |
| 7yu4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 48.0 | 3.87e-01 | 99.2% | 54.9% |
| 5tqbB01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.54 | 39.0 | 2.95e-01 | 75.8% | 79.5% |
| 2v57A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.52 | 40.0 | 3.69e-01 | 84.7% | 91.8% |
| 2om6A02 | 1.10.150.400 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.52 | 31.0 | 3.73e-01 | 83.1% | 92.4% |
| 5ojcA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 43.0 | 4.02e-01 | 91.1% | 87.0% |
| 4houB00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 33.0 | 2.63e-01 | 76.6% | 32.6% |
| 6a2aA01 | 1.50.10.130 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Terpene synthase, N-terminal domain | 0.51 | 38.0 | 3.28e-01 | 78.2% | 57.6% |
| 3au4A01 | 1.25.40.530 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › MyTH4 domain | 0.51 | 39.0 | 3.44e-01 | 83.9% | 94.9% |
| 4nn1A00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.51 | 39.0 | 3.39e-01 | 83.9% | 83.9% |
| 3gziA00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.50 | 38.0 | 3.33e-01 | 81.5% | 91.1% |
| 1kt1A03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.50 | 32.0 | 2.96e-01 | 100.0% | 50.6% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4637522 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.64 | 45.0 | 4.70e-01 | 85.5% | 78.3% |
| None | — | 0.63 | 43.0 | 3.44e-01 | 79.0% | 34.4% | |
| 3872947 | 633.6.1.43 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › PF28139 | 0.62 | 49.0 | 4.63e-01 | 81.5% | 92.4% |
| 4252465 | 603.1.1.89 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › TRAP-gamma | 0.61 | 39.0 | 4.15e-01 | 72.6% | 71.8% |
| 3422506 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.61 | 48.0 | 3.90e-01 | 84.7% | 78.3% |
| 3456226 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.59 | 46.0 | 3.70e-01 | 84.7% | 72.3% |
| 3992094 | 604.39.1.0 ↗ | alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters | 0.57 | 52.0 | 4.53e-01 | 100.0% | 75.3% |
| 3691088 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.57 | 35.0 | 2.88e-01 | 74.2% | 34.1% |
| 3998675 | 1075.4.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold | 0.55 | 44.0 | 3.47e-01 | 82.3% | 59.7% |
| 3379776 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.55 | 44.0 | 3.63e-01 | 87.1% | 82.6% |
| 4362095 | 1073.1.1.42 ↗ | alpha arrays › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › EVC2_like | 0.55 | 43.0 | 3.69e-01 | 84.7% | 89.8% |
| 3269044 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 44.0 | 3.75e-01 | 87.9% | 88.6% |
| 4996217 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 43.0 | 3.69e-01 | 87.1% | 80.5% |
| 5042923 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 40.0 | 4.19e-01 | 77.4% | 94.8% |
| 3576316 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 43.0 | 3.40e-01 | 87.1% | 67.3% |
| 5001604 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 42.0 | 3.64e-01 | 84.7% | 85.0% |
| 3388736 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.53 | 38.0 | 3.69e-01 | 74.2% | 85.0% |
| 3263522 | 5050.1.1.11 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › UNC-93 | 0.52 | 42.0 | 3.60e-01 | 87.1% | 85.9% |
| 3228799 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 46.0 | 4.00e-01 | 100.0% | 81.0% |
| 5046916 | 1075.4.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane | 0.51 | 37.0 | 2.78e-01 | 75.0% | 85.2% |
| 3770290 | 4177.1.1.41 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › EVC2_like | 0.50 | 44.0 | 3.85e-01 | 97.6% | 99.5% |
| 5063236 | 5054.1.1.6 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › TrkH | 0.50 | 44.0 | 4.07e-01 | 96.0% | 95.6% |
D4
high
residues 512-574
Domain cluster:
representative
CATH (44)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.65 | 52.0 | 5.05e-01 | 93.7% | 90.5% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 50.0 | 5.02e-01 | 88.9% | 86.4% |
| 4p78C00 | 3.30.920.30 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. | 0.65 | 45.0 | 4.47e-01 | 74.6% | 69.7% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 53.0 | 4.72e-01 | 95.2% | 97.9% |
| 1txdA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 52.0 | 4.33e-01 | 98.4% | 69.4% |
| 2hjjA00 | 3.30.160.130 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › ykff protein like domains | 0.60 | 41.0 | 4.08e-01 | 71.4% | 75.8% |
| 2kvtA00 | 3.30.730.30 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › YaiA protein | 0.59 | 40.0 | 3.94e-01 | 71.4% | 70.4% |
| 5b7gA00 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.59 | 40.0 | 2.69e-01 | 71.4% | 95.6% |
| 3pubA02 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 46.0 | 3.52e-01 | 88.9% | 91.3% |
| 2ltrA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.58 | 41.0 | 3.56e-01 | 76.2% | 50.5% |
| 4ihzA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 43.0 | 3.20e-01 | 79.4% | 36.0% |
| 1x31C01 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.58 | 41.0 | 3.55e-01 | 76.2% | 84.8% |
| 4ifaA01 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.58 | 39.0 | 2.63e-01 | 76.2% | 16.1% |
| 7obmA01 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.58 | 40.0 | 2.56e-01 | 73.0% | 14.6% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 39.0 | 3.10e-01 | 74.6% | 31.9% |
| 3sb1A01 | 3.30.1370.140 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › HupH hydrogenase expression protein, C-terminal domain | 0.58 | 41.0 | 3.63e-01 | 77.8% | 54.5% |
| 3oajA02 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 40.0 | 3.12e-01 | 76.2% | 88.2% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.56 | 43.0 | 3.47e-01 | 96.8% | 43.7% |
| 2zxiA03 | 1.10.10.1800 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG/GidA | 0.56 | 48.0 | 4.20e-01 | 98.4% | 75.3% |
| 1u7bA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 46.0 | 3.13e-01 | 93.7% | 44.6% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 39.0 | 3.75e-01 | 76.2% | 73.3% |
| 5zg8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 3.62e-01 | 84.1% | 82.4% |
| 2db2A01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 39.0 | 3.53e-01 | 79.4% | 67.0% |
| 3d4eA01 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.54 | 39.0 | 3.66e-01 | 79.4% | 72.6% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.54 | 38.0 | 3.88e-01 | 84.1% | 78.7% |
| 5yjlC02 | 3.20.180.10 | Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like | 0.54 | 37.0 | 3.06e-01 | 71.4% | 55.0% |
| 1sxjH01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.54 | 43.0 | 3.59e-01 | 93.7% | 91.1% |
| 2hc5A01 | 3.30.160.170 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like | 0.54 | 47.0 | 4.07e-01 | 98.4% | 94.9% |
| 3cpfA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 38.0 | 3.80e-01 | 82.5% | 73.8% |
| 3l44A01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 47.0 | 3.41e-01 | 100.0% | 75.4% |
| 1e8cA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.53 | 44.0 | 3.03e-01 | 95.2% | 84.9% |
| 6ywnA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.53 | 36.0 | 3.06e-01 | 71.4% | 43.5% |
| 2pw4A00 | 1.10.3300.10 | Mainly Alpha › Orthogonal Bundle › Jann2411-like fold › Jann2411-like domain | 0.53 | 38.0 | 2.79e-01 | 79.4% | 35.0% |
| 4hc5D00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.52 | 36.0 | 2.89e-01 | 71.4% | 35.9% |
| 2mqdA00 | 3.30.1460.60 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.52 | 41.0 | 3.44e-01 | 92.1% | 83.2% |
| 2rqlA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.52 | 35.0 | 3.13e-01 | 71.4% | 65.3% |
| 3hdjA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.52 | 45.0 | 3.48e-01 | 98.4% | 74.3% |
| 3nybA02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.51 | 36.0 | 3.02e-01 | 73.0% | 74.5% |
| 1h8mA00 | 3.30.450.50 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin domain | 0.51 | 36.0 | 2.80e-01 | 74.6% | 70.7% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 38.0 | 2.48e-01 | 100.0% | 16.2% |
| 8dy9I01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.51 | 44.0 | 3.08e-01 | 96.8% | 59.2% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.51 | 44.0 | 3.85e-01 | 100.0% | 83.0% |
| 3kt7A01 | 2.60.120.620 | Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain | 0.51 | 38.0 | 2.64e-01 | 84.1% | 85.4% |
| 1dz1A00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 39.0 | 3.88e-01 | 93.7% | 81.4% |
ECOD (51)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3410486 | 220.1.1.57 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 | 0.70 | 59.0 | 4.76e-01 | 96.8% | 83.1% |
| 3784907 | 896.1.1.3 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 | 0.68 | 54.0 | 4.96e-01 | 88.9% | 92.9% |
| 4961948 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.67 | 58.0 | 4.79e-01 | 100.0% | 74.2% |
| 3928803 | 4967.1.1.0 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases | 0.66 | 45.0 | 3.15e-01 | 71.4% | 23.0% |
| 3370663 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.66 | 51.0 | 5.30e-01 | 85.7% | 96.6% |
| 5000498 | 896.1.1.1 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e | 0.65 | 51.0 | 5.22e-01 | 87.3% | 91.7% |
| 3789602 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 51.0 | 4.20e-01 | 92.1% | 78.4% |
| 3584264 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.64 | 51.0 | 4.19e-01 | 92.1% | 78.4% |
| 3224246 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.63 | 51.0 | 4.40e-01 | 92.1% | 95.2% |
| 3577264 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.63 | 46.0 | 3.59e-01 | 84.1% | 34.0% |
| 3735661 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.63 | 52.0 | 4.43e-01 | 93.7% | 56.2% |
| 4996362 | 220.1.1.87 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 | 0.62 | 52.0 | 4.47e-01 | 98.4% | 100.0% |
| 3841924 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 48.0 | 4.15e-01 | 92.1% | 86.4% |
| None | — | 0.61 | 43.0 | 2.69e-01 | 74.6% | 98.0% | |
| 2426538 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.60 | 42.0 | 3.53e-01 | 76.2% | 50.4% |
| 3400449 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 49.0 | 3.68e-01 | 96.8% | 84.0% |
| 3799834 | 3409.1.1.2 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › VPS38 | 0.59 | 42.0 | 3.23e-01 | 76.2% | 35.2% |
| 4257463 | 4292.1.1.1 ↗ | a+b two layers › FlaG-like › FlaG-related › FlaG-related › FlaG | 0.59 | 42.0 | 3.98e-01 | 74.6% | 68.0% |
| 3460911 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.58 | 41.0 | 2.99e-01 | 76.2% | 67.2% |
| 5041064 | 305.2.1.1 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin_4a | 0.58 | 39.0 | 3.50e-01 | 71.4% | 84.2% |
| 3418892 | 5.1.8.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › DUF295 | 0.58 | 41.0 | 3.36e-01 | 74.6% | 40.9% |
| 3186255 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.58 | 41.0 | 2.66e-01 | 77.8% | 21.9% |
| 3970048 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.58 | 40.0 | 3.82e-01 | 74.6% | 65.4% |
| 3894031 | 330.1.1.6 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Staufen_C | 0.57 | 41.0 | 3.80e-01 | 77.8% | 64.7% |
| 3937782 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.57 | 41.0 | 3.16e-01 | 79.4% | 90.9% |
| 4776306 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.57 | 46.0 | 3.34e-01 | 100.0% | 31.8% |
| 2323829 | 3484.1.1.2 ↗ | a+b two layers › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Laminaripentaose-producing beta-1,3-glucanase insertion domain › Glyco_hydro_64 | 0.56 | 43.0 | 3.17e-01 | 96.8% | 32.3% |
| 3743587 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.56 | 38.0 | 3.02e-01 | 71.4% | 38.5% |
| 3618540 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 37.0 | 3.56e-01 | 71.4% | 58.7% |
| 3544618 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.55 | 41.0 | 3.78e-01 | 81.0% | 67.1% |
| 3510695 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.55 | 41.0 | 3.87e-01 | 84.1% | 80.0% |
| 3388135 | 4292.2.1.1 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain › FlaG | 0.54 | 38.0 | 3.66e-01 | 74.6% | 68.0% |
| 3739127 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.54 | 38.0 | 2.96e-01 | 73.0% | 55.7% |
| 3998167 | 247.1.1.0 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase | 0.54 | 44.0 | 3.01e-01 | 93.7% | 32.0% |
| 3251045 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.54 | 43.0 | 3.38e-01 | 93.7% | 72.7% |
| 5012156 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.54 | 39.0 | 3.53e-01 | 79.4% | 91.1% |
| 4024012 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 38.0 | 2.75e-01 | 76.2% | 58.1% |
| 4178829 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.53 | 43.0 | 3.54e-01 | 93.7% | 85.6% |
| 3273805 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.53 | 36.0 | 2.81e-01 | 71.4% | 57.1% |
| 4966836 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 37.0 | 3.86e-01 | 81.0% | 89.1% |
| 5014331 | 2004.1.1.293 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_15 | 0.52 | 38.0 | 2.14e-01 | 76.2% | 26.8% |
| 3471048 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 38.0 | 2.34e-01 | 81.0% | 97.9% |
| 4323652 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.52 | 37.0 | 3.22e-01 | 79.4% | 46.7% |
| 5061231 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.51 | 35.0 | 3.64e-01 | 73.0% | 96.7% |
| 3602548 | 227.1.1.1 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N | 0.51 | 41.0 | 3.40e-01 | 93.7% | 84.8% |
| 5001279 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.51 | 42.0 | 2.65e-01 | 92.1% | 34.0% |
| 5023931 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.51 | 35.0 | 3.46e-01 | 74.6% | 67.1% |
| 5044629 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.51 | 35.0 | 2.81e-01 | 71.4% | 67.8% |
| 3797481 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.50 | 34.0 | 2.74e-01 | 71.4% | 56.3% |
| 3709800 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.50 | 36.0 | 3.26e-01 | 79.4% | 61.1% |
| 4337520 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.50 | 36.0 | 3.14e-01 | 95.2% | 49.0% |
D5
medium
residues 6-117
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2k85A00 | 1.10.10.440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain | 0.65 | 37.0 | 4.67e-01 | 83.0% | 96.9% |
| 2js9A00 | 1.10.225.10 | Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like | 0.63 | 39.0 | 4.45e-01 | 79.5% | 85.2% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.63 | 37.0 | 4.74e-01 | 82.1% | 100.0% |
| 4hhyC01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.61 | 45.0 | 4.33e-01 | 77.7% | 84.7% |
| 2nnwA02 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 43.0 | 4.12e-01 | 73.2% | 91.3% |
| 1urjA03 | 1.10.150.560 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.58 | 36.0 | 4.08e-01 | 90.2% | 82.9% |
| 3mabA00 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.58 | 34.0 | 3.76e-01 | 84.8% | 74.1% |
| 4l7nA01 | 1.20.142.10 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › Poly(ADP-ribose) polymerase, regulatory domain | 0.58 | 43.0 | 4.02e-01 | 79.5% | 82.5% |
| 2lsoA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 40.0 | 4.60e-01 | 90.2% | 96.4% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 40.0 | 3.66e-01 | 84.8% | 54.4% |
| 3smtA02 | 3.90.1420.10 | Alpha Beta › Alpha-Beta Complex › set domain protein methyltransferase, domain 2 › Rubisco LSMT, substrate-binding domain | 0.57 | 44.0 | 3.85e-01 | 81.2% | 95.1% |
| 2ra1A03 | 1.20.58.770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 32.0 | 4.06e-01 | 84.8% | 98.4% |
| 2r40D00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.55 | 50.0 | 3.94e-01 | 100.0% | 87.6% |
| 1cqxA01 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.54 | 45.0 | 4.10e-01 | 97.3% | 68.7% |
| 3kr9A02 | 1.10.287.1890 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 30.0 | 3.74e-01 | 70.5% | 98.4% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 39.0 | 3.66e-01 | 88.4% | 62.1% |
| 1pu6A02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.52 | 37.0 | 3.63e-01 | 73.2% | 85.4% |
| 3r2cA00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.52 | 39.0 | 3.66e-01 | 87.5% | 63.0% |
| 4u7iA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.52 | 40.0 | 4.42e-01 | 92.9% | 98.9% |
| 2i0mA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.52 | 43.0 | 4.48e-01 | 93.8% | 94.3% |
| 2c42A03 | 3.40.920.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III | 0.52 | 46.0 | 3.72e-01 | 97.3% | 93.4% |
| 1p8dB00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.52 | 46.0 | 3.65e-01 | 100.0% | 90.8% |
| 3psfA02 | 1.10.10.650 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › RuvA domain 2-like | 0.51 | 43.0 | 4.00e-01 | 92.0% | 77.8% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932863 | 101.1.2.947 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF27234 | 0.71 | 42.0 | 4.89e-01 | 83.0% | 82.5% |
| 3906492 | 101.1.1.65 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 | 0.63 | 43.0 | 4.60e-01 | 83.0% | 82.1% |
| 4219793 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.62 | 43.0 | 3.97e-01 | 71.4% | 89.7% |
| 3482834 | 606.1.1.0 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain | 0.62 | 44.0 | 4.14e-01 | 73.2% | 87.4% |
| 5025722 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 39.0 | 3.82e-01 | 85.7% | 58.8% |
| 4211428 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.61 | 52.0 | 4.46e-01 | 100.0% | 60.0% |
| 3237399 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 46.0 | 3.73e-01 | 97.3% | 42.8% |
| 4024626 | 545.1.2.2 ↗ | alpha bundles › Gametocyte protein Pfg27-related › Gametocyte protein Pfg27-related › Sporozoite protein UIS3 soluble domain › ETRAMP | 0.59 | 42.0 | 3.92e-01 | 75.0% | 97.9% |
| 3585743 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.59 | 50.0 | 4.36e-01 | 92.9% | 61.8% |
| 3702300 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.58 | 52.0 | 4.38e-01 | 97.3% | 94.6% |
| 3591288 | 604.12.1.8 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › KATNA1_MIT | 0.58 | 39.0 | 3.77e-01 | 88.4% | 61.6% |
| 3618428 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.57 | 48.0 | 4.13e-01 | 92.0% | 57.7% |
| 3588846 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.57 | 53.0 | 3.97e-01 | 100.0% | 79.2% |
| 4998820 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.56 | 44.0 | 3.50e-01 | 83.9% | 46.5% |
| 3221654 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.55 | 47.0 | 4.14e-01 | 96.4% | 62.4% |
| 50204 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.53 | 39.0 | 3.60e-01 | 89.3% | 59.6% |
| 3250877 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 40.0 | 3.86e-01 | 91.1% | 71.2% |
| 3639027 | 101.1.1.116 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Abp2 | 0.52 | 36.0 | 3.62e-01 | 70.5% | 91.3% |
| 3927197 | 109.30.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Nucleoporin Nup84/Nup107 › Nucleoporin Nup84/Nup107 | 0.52 | 40.0 | 3.18e-01 | 81.2% | 97.4% |
| 3582455 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.52 | 32.0 | 3.89e-01 | 91.1% | 93.3% |
| 3173736 | 5050.1.1.55 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, MFS_1 | 0.52 | 47.0 | 3.10e-01 | 100.0% | 80.6% |
| 3571190 | 109.25.1.7 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A › PF26588 | 0.51 | 37.0 | 3.75e-01 | 93.8% | 73.9% |
| 4954446 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.51 | 32.0 | 3.77e-01 | 83.9% | 93.3% |
| 4003160 | 109.4.1.1224 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_DOCK9 | 0.51 | 42.0 | 2.54e-01 | 97.3% | 13.7% |
| 4946927 | 1197.1.1.1 ↗ | alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › G3P_acyltransf | 0.50 | 41.0 | 3.37e-01 | 92.0% | 61.8% |
| 4986745 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.50 | 38.0 | 3.30e-01 | 80.4% | 52.1% |