←Back to structures
Ig7659_scaffold_8_prodigal-single.1__X__X__00174
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00174
Identity
- Kingdom:
- phage
Quality
82.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-113
Domain cluster:
rep: NC_048719.1__YP_009839166.1__HWB75_gp046__00197__D3-102
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4avaA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 51.0 | 4.26e-01 | 99.1% | 100.0% |
| 2iw2A02 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.55 | 44.0 | 3.32e-01 | 89.0% | 96.6% |
| 4f54A00 | 3.30.160.670 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.53 | 39.0 | 3.34e-01 | 78.9% | 88.0% |
| 2nn6D00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.52 | 45.0 | 3.77e-01 | 99.1% | 98.0% |
| 1uw0A01 | 3.30.1740.10 | Alpha Beta › 2-Layer Sandwich › first zn-finger domain of poly(adp-ribose) polymerase-1 › Zinc finger, PARP-type | 0.51 | 37.0 | 3.93e-01 | 88.1% | 87.5% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1005590 | 3561.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 › Mediator of RNA polymerase II transcription subunit 17 | 0.64 | 32.0 | 2.15e-01 | 79.8% | 12.4% |
| 3992773 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 25.0 | 3.29e-01 | 81.7% | 80.0% |
| 3260561 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.55 | 41.0 | 4.26e-01 | 88.1% | 86.0% |
| 4826815 | 10.1.1.14 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › CoV_S1 | 0.55 | 43.0 | 3.79e-01 | 89.0% | 54.6% |
| 8200 | 377.1.2.1 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger › zf-PARP | 0.52 | 39.0 | 3.87e-01 | 90.8% | 74.4% |
| 3598219 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 44.0 | 4.26e-01 | 92.7% | 90.4% |
| 3597430 | 377.1.2.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › PARP-type zinc finger | 0.52 | 37.0 | 3.95e-01 | 92.7% | 87.2% |
| 4032477 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.51 | 44.0 | 3.90e-01 | 94.5% | 99.4% |
| 3670778 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.51 | 30.0 | 3.35e-01 | 97.2% | 73.3% |
D2
high
residues 117-219
Domain cluster:
rep: RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00349__D2-93