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Ig7659_scaffold_8_prodigal-single.1__X__X__00201
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00201
Identity
- Kingdom:
- phage
Quality
58.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-91
Domain cluster:
rep: CAKLQF020000006.1__CAH1080324.1__SAMEA5780031_01553__00195__D2-96
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1yqyA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.62 | 44.0 | 3.35e-01 | 73.3% | 61.3% |
| 1qs1A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.60 | 44.0 | 3.39e-01 | 76.7% | 99.5% |
| 2d3aA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.59 | 44.0 | 4.33e-01 | 82.2% | 85.1% |
| 1gzeA00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.58 | 43.0 | 3.29e-01 | 77.8% | 97.6% |
| 1c77B00 | 3.10.20.130 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 45.0 | 4.00e-01 | 86.7% | 89.1% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 42.0 | 4.43e-01 | 97.8% | 92.7% |
| 6lumB01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.55 | 43.0 | 4.06e-01 | 85.6% | 97.3% |
| 3p26B02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 45.0 | 4.35e-01 | 97.8% | 81.2% |
| 6k93A00 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.54 | 37.0 | 2.76e-01 | 71.1% | 42.3% |
| 4wqmA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 43.0 | 4.25e-01 | 97.8% | 82.7% |
| 1kf6B01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.54 | 42.0 | 4.03e-01 | 85.6% | 96.2% |
| 2yweA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 43.0 | 4.16e-01 | 97.8% | 79.0% |
| 1zunB02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 41.0 | 4.17e-01 | 97.8% | 84.4% |
| 2b0vA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.53 | 46.0 | 3.98e-01 | 100.0% | 69.6% |
| 3kwlA01 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 41.0 | 4.09e-01 | 85.6% | 92.8% |
| 1krhA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.52 | 44.0 | 4.38e-01 | 97.8% | 89.7% |
| 4h3sA02 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.52 | 46.0 | 4.23e-01 | 100.0% | 92.5% |
| 2hz7A05 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.52 | 46.0 | 4.14e-01 | 100.0% | 98.4% |
| 3mcaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 42.0 | 3.93e-01 | 96.7% | 71.2% |
| 2rceA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.51 | 35.0 | 3.41e-01 | 80.0% | 62.3% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947785 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.74 | 49.0 | 5.51e-01 | 86.7% | 88.4% |
| 4313861 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.71 | 48.0 | 5.26e-01 | 78.9% | 85.1% |
| 4061290 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.69 | 48.0 | 5.31e-01 | 86.7% | 90.4% |
| 4498097 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.64 | 37.0 | 3.65e-01 | 80.0% | 53.7% |
| 3009261 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.64 | 51.0 | 4.71e-01 | 84.4% | 78.6% |
| 5019872 | 239.1.1.15 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › CPxCG_zf | 0.63 | 46.0 | 4.80e-01 | 76.7% | 83.5% |
| 3931740 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.62 | 47.0 | 4.42e-01 | 81.1% | 99.1% |
| 3330697 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.59 | 50.0 | 4.57e-01 | 94.4% | 93.3% |
| 3926921 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.57 | 46.0 | 3.72e-01 | 87.8% | 50.6% |
| 3612101 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.56 | 43.0 | 4.25e-01 | 81.1% | 97.9% |
| 3502344 | 1.1.7.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › GTP_EFTU_D2 | 0.55 | 43.0 | 4.30e-01 | 97.8% | 82.1% |
| 3058418 | 1.1.13.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_attach | 0.54 | 40.0 | 3.88e-01 | 78.9% | 93.1% |
| 4453032 | 1.1.7.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_6 | 0.52 | 43.0 | 4.24e-01 | 97.8% | 85.0% |
| 4539652 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 44.0 | 4.33e-01 | 97.8% | 85.0% |
| 4549840 | 60.1.2.2 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain › Ku,Ku_C | 0.52 | 39.0 | 2.87e-01 | 83.3% | 54.4% |
| 3957241 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 39.0 | 2.90e-01 | 84.4% | 80.0% |
| 3797433 | 60.1.2.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › Ku70/80 subunit middle domain | 0.51 | 38.0 | 2.71e-01 | 82.2% | 57.7% |
| 4002775 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 44.0 | 3.97e-01 | 96.7% | 74.4% |
| 5068146 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 43.0 | 3.84e-01 | 100.0% | 85.7% |
| 5035411 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 42.0 | 3.91e-01 | 97.8% | 71.3% |
| 4945652 | 1.1.7.143 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › IF-2 | 0.51 | 44.0 | 4.02e-01 | 97.8% | 73.3% |
| 3961019 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.50 | 38.0 | 2.90e-01 | 84.4% | 89.4% |
| 4024512 | 11.1.1.864 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Lipin_N, LNS2 | 0.50 | 42.0 | 3.94e-01 | 98.9% | 99.2% |
| 3666818 | 2.1.1.138 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › ATG11 | 0.50 | 30.0 | 3.15e-01 | 84.4% | 65.0% |
D2
medium
residues 121-179