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Ig7659_scaffold_8_prodigal-single.1__X__X__00248
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00248
Identity
- Kingdom:
- phage
Quality
81.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-105
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF16245.11 best | DUF4902 | 35.7 | 1.10e-08 | 98.9% | 60.2% |
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o2hA00 | 3.10.450.610 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.91 | 87.0 | 7.43e-01 | 100.0% | 83.2% |
| 3ovcA01 | 3.30.200.150 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.63 | 35.0 | 3.91e-01 | 86.0% | 70.4% |
| 3fljA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 45.0 | 3.88e-01 | 79.6% | 51.1% |
| 3f8xB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 45.0 | 4.01e-01 | 79.6% | 55.3% |
| 2dx0A00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 36.0 | 3.38e-01 | 83.9% | 49.6% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.58 | 46.0 | 4.24e-01 | 86.0% | 75.6% |
| 2y8tA03 | 2.10.70.70 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.57 | 28.0 | 3.48e-01 | 92.5% | 76.4% |
| 4jglA00 | 2.40.128.530 | Mainly Beta › Beta Barrel › Lipocalin › | 0.56 | 46.0 | 3.91e-01 | 89.2% | 74.3% |
| 1lf6A01 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.56 | 42.0 | 3.08e-01 | 81.7% | 61.9% |
| 2w4yA00 | 2.40.160.220 | Mainly Beta › Beta Barrel › Porin › | 0.56 | 40.0 | 3.63e-01 | 74.2% | 89.3% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 46.0 | 3.80e-01 | 90.3% | 90.9% |
| 7wa9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.54 | 43.0 | 3.83e-01 | 88.2% | 58.9% |
| 5b0hA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.54 | 38.0 | 3.39e-01 | 73.1% | 100.0% |
| 3jv1A00 | 3.10.280.10 | Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein | 0.53 | 44.0 | 3.62e-01 | 93.5% | 60.4% |
| 6ka3A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 44.0 | 3.83e-01 | 91.4% | 95.2% |
| 3w9kA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.53 | 44.0 | 3.88e-01 | 90.3% | 93.3% |
| 4ifdF00 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.53 | 42.0 | 3.34e-01 | 90.3% | 60.1% |
| 4l9cA00 | 3.40.1000.30 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › | 0.52 | 37.0 | 3.29e-01 | 76.3% | 60.0% |
| 1ylxA00 | 3.30.70.1480 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like | 0.52 | 39.0 | 3.89e-01 | 80.6% | 76.8% |
| 4nkbA01 | 3.30.1120.120 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 41.0 | 3.92e-01 | 88.2% | 82.5% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 32.0 | 3.39e-01 | 88.2% | 69.4% |
| 5o7oC01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.51 | 35.0 | 3.19e-01 | 80.6% | 52.0% |
| 6zhhA01 | 3.40.1110.10 | Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N | 0.51 | 40.0 | 3.34e-01 | 88.2% | 86.7% |
| 5cenA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 36.0 | 3.91e-01 | 89.2% | 89.7% |
| 2ppqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 38.0 | 3.84e-01 | 89.2% | 79.8% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 40.0 | 3.63e-01 | 92.5% | 61.8% |
| 4r8oA00 | 2.40.128.720 | Mainly Beta › Beta Barrel › Lipocalin › | 0.50 | 35.0 | 3.52e-01 | 74.2% | 75.5% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1142019 | 4180.2.1.1 ↗ | a+b two layers › SpoVG-like › RsaM homologs › RsaM homologs › DUF4902 | 0.91 | 87.0 | 7.43e-01 | 100.0% | 83.2% |
| 4419139 | 244.4.1.2 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › Ni-Fe binding domain in nickel-iron hydrogenase large subunit › NiFeSe_Hases | 0.68 | 48.0 | 4.09e-01 | 72.0% | 90.3% |
| 184879 | 243.1.1.8 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC | 0.67 | 47.0 | 3.69e-01 | 76.3% | 37.4% |
| 4024769 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.66 | 45.0 | 5.25e-01 | 80.6% | 100.0% |
| 3976580 | 243.1.1.21 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF3828 | 0.65 | 46.0 | 3.84e-01 | 78.5% | 43.8% |
| 4937970 | 3111.1.1.0 ↗ | beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain | 0.61 | 53.0 | 5.07e-01 | 95.7% | 92.7% |
| 3415735 | 216.1.1.20 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like | 0.61 | 45.0 | 4.55e-01 | 86.0% | 77.9% |
| 3186460 | 708.1.2.4 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › NTP_transf_9 | 0.60 | 42.0 | 4.06e-01 | 73.1% | 87.6% |
| 3251513 | 12.3.1.46 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › ComC_SSD | 0.59 | 47.0 | 3.47e-01 | 87.1% | 76.4% |
| 3266335 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.58 | 41.0 | 4.16e-01 | 83.9% | 74.4% |
| 5043802 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 47.0 | 4.42e-01 | 88.2% | 78.3% |
| 4928697 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.57 | 44.0 | 4.04e-01 | 91.4% | 61.2% |
| 3390942 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.57 | 45.0 | 4.28e-01 | 86.0% | 74.5% |
| 3290736 | 331.3.1.9 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 | 0.56 | 43.0 | 3.66e-01 | 87.1% | 49.0% |
| 2022 | 12.3.1.16 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glucodextran_N | 0.56 | 42.0 | 3.06e-01 | 81.7% | 61.0% |
| 5074323 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.55 | 43.0 | 4.04e-01 | 82.8% | 72.2% |
| 4426077 | 241.1.1.2 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Autophagy_act_C | 0.54 | 42.0 | 3.59e-01 | 83.9% | 87.1% |
| 5043413 | 4252.1.1.0 ↗ | beta barrels › AttH-like › AttH-like › AttH-like | 0.54 | 46.0 | 4.40e-01 | 95.7% | 80.0% |
| 3439826 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 45.0 | 3.87e-01 | 92.5% | 82.7% |
| 5062640 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.53 | 42.0 | 2.96e-01 | 90.3% | 27.0% |
| 5004871 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.53 | 42.0 | 4.35e-01 | 87.1% | 98.9% |
| 3282063 | 331.3.1.11 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 | 0.52 | 42.0 | 3.82e-01 | 86.0% | 69.6% |
| 6647 | 241.8.1.1 ↗ | a+b two layers › Type III secretory system chaperone-like › GK1464-like › GK1464-like › DUF5634 | 0.52 | 39.0 | 3.88e-01 | 80.6% | 76.0% |
| 4043249 | 206.1.1.117 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PF27663 | 0.52 | 41.0 | 2.79e-01 | 86.0% | 22.9% |
| 370870 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.51 | 43.0 | 3.76e-01 | 90.3% | 95.6% |
| 3186307 | 206.1.1.28 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Haspin_kinase | 0.51 | 44.0 | 2.91e-01 | 95.7% | 30.3% |
| 5079259 | 2004.1.1.308 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 | 0.50 | 38.0 | 2.65e-01 | 80.6% | 38.5% |
| 5073876 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.50 | 41.0 | 2.64e-01 | 89.2% | 98.9% |
| 4013490 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.50 | 44.0 | 2.88e-01 | 96.8% | 28.4% |