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Ig7659_scaffold_8_prodigal-single.1__X__X__00249
Bact-VirIg7659_scaffold_8_prodigal-single.1__X__X__00249
Identity
- Kingdom:
- phage
Quality
72.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-92
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3e99A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 41.0 | 3.37e-01 | 70.6% | 37.2% |
| 3ia8A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 54.0 | 4.37e-01 | 100.0% | 90.1% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 39.0 | 4.42e-01 | 94.1% | 92.1% |
| 4le5B03 | 3.30.300.10 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.57 | 49.0 | 4.23e-01 | 95.3% | 89.6% |
| 4f7uF00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.17e-01 | 97.6% | 83.6% |
| 3cjeA00 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 41.0 | 3.51e-01 | 81.2% | 69.3% |
| 3n4eA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.55 | 43.0 | 4.03e-01 | 84.7% | 96.2% |
| 2w3sB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.55 | 44.0 | 3.40e-01 | 89.4% | 73.9% |
| 1t3qB04 | 3.30.365.10 | Alpha Beta › 2-Layer Sandwich › Aldehyde Oxidoreductase; domain 4 › Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain | 0.54 | 44.0 | 3.45e-01 | 90.6% | 74.7% |
| 4rnyA02 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 49.0 | 4.08e-01 | 100.0% | 96.6% |
| 2b5lB01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.54 | 44.0 | 2.95e-01 | 94.1% | 51.8% |
| 3cgbA03 | 3.30.390.30 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain | 0.53 | 42.0 | 3.87e-01 | 85.9% | 82.7% |
| 4dj3B02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 42.0 | 3.43e-01 | 85.9% | 51.3% |
| 3hk4A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.27e-01 | 71.8% | 79.7% |
| 4mj3B00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 39.0 | 2.72e-01 | 82.4% | 31.8% |
| 5nslA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 43.0 | 2.83e-01 | 97.6% | 38.1% |
| 1uv4A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.51 | 42.0 | 3.06e-01 | 98.8% | 71.5% |
| 6x05A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 39.0 | 2.62e-01 | 85.9% | 24.1% |
| 4qxaB00 | 2.30.29.230 | Mainly Beta › Roll › PH-domain like › | 0.50 | 44.0 | 3.71e-01 | 98.8% | 75.5% |
| 5bkaE01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 40.0 | 3.54e-01 | 89.4% | 90.2% |
| 4ojdH01 | 2.60.98.60 | Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 | 0.50 | 39.0 | 3.30e-01 | 89.4% | 72.6% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3258657 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.68 | 38.0 | 4.23e-01 | 78.8% | 68.6% |
| 3494688 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.67 | 52.0 | 4.01e-01 | 83.5% | 58.9% |
| 3773175 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.63 | 50.0 | 3.98e-01 | 88.2% | 51.9% |
| 3798012 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.62 | 48.0 | 3.53e-01 | 85.9% | 65.5% |
| 3829563 | 897.1.1.0 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 | 0.62 | 49.0 | 3.93e-01 | 88.2% | 43.6% |
| 3517722 | 883.1.1.28 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › DUF7060 | 0.60 | 48.0 | 3.68e-01 | 87.1% | 40.5% |
| 3274831 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.57 | 46.0 | 3.67e-01 | 90.6% | 82.2% |
| 3767098 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.57 | 50.0 | 3.20e-01 | 100.0% | 36.5% |
| 4944090 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 46.0 | 4.23e-01 | 98.8% | 69.1% |
| 3532301 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 49.0 | 3.77e-01 | 100.0% | 77.1% |
| 4965906 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 47.0 | 4.36e-01 | 92.9% | 85.5% |
| 4114374 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.56 | 49.0 | 3.86e-01 | 100.0% | 83.8% |
| 3961802 | 243.5.1.9 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › UPF0182 | 0.55 | 46.0 | 3.54e-01 | 92.9% | 77.5% |
| 3505666 | 4099.1.1.2 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 | 0.55 | 38.0 | 3.81e-01 | 95.3% | 70.6% |
| 4012048 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 46.0 | 3.08e-01 | 92.9% | 71.5% |
| 4024322 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.21e-01 | 98.8% | 88.0% |
| 4932706 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.55 | 44.0 | 2.64e-01 | 85.9% | 65.0% |
| 3259884 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.55 | 37.0 | 3.04e-01 | 70.6% | 70.0% |
| 3201856 | 2004.1.1.199 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23,SbcC_Walker_B | 0.54 | 43.0 | 2.66e-01 | 88.2% | 56.8% |
| 3867655 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.54 | 46.0 | 3.51e-01 | 100.0% | 70.2% |
| 4517026 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.54 | 47.0 | 3.62e-01 | 100.0% | 79.0% |
| 4947567 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.54 | 42.0 | 2.68e-01 | 85.9% | 52.7% |
| 3390766 | 883.1.1.3 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › JHBP | 0.53 | 42.0 | 3.23e-01 | 88.2% | 60.5% |
| 3846061 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.53 | 47.0 | 3.74e-01 | 100.0% | 82.8% |
| 4441646 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.53 | 46.0 | 3.69e-01 | 100.0% | 85.9% |
| 4529819 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.53 | 40.0 | 3.48e-01 | 80.0% | 77.8% |
| 4616073 | 4099.1.1.11 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Med14 | 0.53 | 45.0 | 4.07e-01 | 95.3% | 76.7% |
| 3995035 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.53 | 43.0 | 3.47e-01 | 85.9% | 51.0% |
| 3920715 | 2004.1.1.674 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21, AAA_23, SbcC_Walker_B | 0.53 | 44.0 | 2.75e-01 | 92.9% | 91.0% |
| 3631198 | 5.1.2.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF5005 | 0.52 | 43.0 | 2.88e-01 | 94.1% | 48.0% |
| 3763426 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.52 | 45.0 | 3.54e-01 | 100.0% | 80.0% |
| 5019252 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.52 | 41.0 | 2.52e-01 | 84.7% | 60.8% |
| 4023469 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 43.0 | 3.77e-01 | 96.5% | 59.3% |
| 3199325 | 241.1.1.11 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Med14 | 0.52 | 44.0 | 3.50e-01 | 96.5% | 50.0% |
| 4345467 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.51 | 41.0 | 2.62e-01 | 88.2% | 53.0% |
| 3444245 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.51 | 39.0 | 4.09e-01 | 85.9% | 94.7% |
| 4154416 | 6129.1.1.1 ↗ | beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD | 0.51 | 43.0 | 3.57e-01 | 100.0% | 85.7% |
| 3441483 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.51 | 42.0 | 2.86e-01 | 94.1% | 28.7% |
| None | — | 0.51 | 35.0 | 2.53e-01 | 100.0% | 23.5% | |
| 5042375 | 2.26.1.1 ↗ | beta barrels › OB-fold › Arcadin-1 › Arcadin-1 › Arcadin_1 | 0.51 | 35.0 | 3.69e-01 | 100.0% | 81.3% |
| 2628859 | 243.1.1.26 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 | 0.51 | 40.0 | 3.56e-01 | 89.4% | 89.6% |
| 3450764 | 9.23.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 | 0.50 | 43.0 | 3.55e-01 | 95.3% | 52.9% |
D2
high
residues 96-155