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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00013
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00013
Identity
- Kingdom:
- phage
Quality
73.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-80
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fhnA01 | 6.10.280.210 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dsl1p vesicle tethering complex, Tip20p subunit, domain A | 0.70 | 45.0 | 3.15e-01 | 77.0% | 21.7% |
| 3ic9A02 | 1.10.287.990 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain | 0.69 | 61.0 | 5.83e-01 | 100.0% | 91.4% |
| 3l8kA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.68 | 58.0 | 4.02e-01 | 100.0% | 27.6% |
| 4n6cB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.67 | 57.0 | 4.05e-01 | 95.1% | 35.9% |
| 4l8jA04 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 45.0 | 4.66e-01 | 85.2% | 76.3% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.64 | 52.0 | 4.35e-01 | 95.1% | 52.9% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 46.0 | 3.78e-01 | 78.7% | 55.6% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.62 | 55.0 | 3.71e-01 | 96.7% | 62.6% |
| 4ou7A00 | 1.10.8.1180 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 41.0 | 3.99e-01 | 93.4% | 60.6% |
| 1l0oC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.61 | 43.0 | 4.50e-01 | 75.4% | 86.0% |
| 2nr7A00 | 1.20.141.10 | Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 | 0.61 | 54.0 | 3.79e-01 | 100.0% | 60.3% |
| 2dgzA01 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.61 | 50.0 | 4.47e-01 | 93.4% | 94.4% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.60 | 47.0 | 4.78e-01 | 88.5% | 83.3% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 51.0 | 4.43e-01 | 95.1% | 69.1% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.60 | 46.0 | 4.16e-01 | 90.2% | 59.6% |
| 2z3xA00 | 6.10.10.80 | Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like | 0.59 | 47.0 | 4.84e-01 | 88.5% | 94.6% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.58 | 48.0 | 3.35e-01 | 88.5% | 43.7% |
| 4w4kA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.58 | 46.0 | 4.20e-01 | 88.5% | 64.6% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.57 | 36.0 | 3.84e-01 | 91.8% | 75.0% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 44.0 | 4.34e-01 | 83.6% | 87.9% |
| 1is8A01 | 1.10.286.10 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › GTP cyclohydrolase I, N-terminal domain | 0.56 | 45.0 | 4.55e-01 | 96.7% | 96.7% |
| 4mt0A01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.55 | 50.0 | 3.05e-01 | 100.0% | 61.7% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 42.0 | 3.59e-01 | 83.6% | 85.3% |
| 1iv8A03 | 1.10.150.200 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 | 0.53 | 39.0 | 3.55e-01 | 80.3% | 100.0% |
| 3hzsA00 | 1.10.3810.10 | Mainly Alpha › Orthogonal Bundle › Penicillin binding protein transpeptidase fold › Biosynthetic peptidoglycan transglycosylase-like | 0.52 | 38.0 | 2.59e-01 | 77.0% | 78.5% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.50 | 45.0 | 3.89e-01 | 96.7% | 76.7% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045310 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.76 | 48.0 | 4.60e-01 | 82.0% | 57.1% |
| 3492091 | 5063.1.1.16 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Romo1 | 0.74 | 58.0 | 5.75e-01 | 100.0% | 81.5% |
| 3479808 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.72 | 49.0 | 3.63e-01 | 82.0% | 28.9% |
| 3648224 | 142.1.1.0 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors | 0.71 | 57.0 | 4.40e-01 | 91.8% | 38.7% |
| 3988791 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.69 | 50.0 | 4.75e-01 | 90.2% | 65.7% |
| 3888162 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.68 | 49.0 | 3.82e-01 | 77.0% | 38.3% |
| 4027897 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.67 | 48.0 | 4.04e-01 | 82.0% | 46.0% |
| 3246869 | 212.1.1.0 ↗ | a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like | 0.66 | 56.0 | 3.70e-01 | 100.0% | 23.7% |
| 4965739 | 5063.1.1.0 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK | 0.66 | 56.0 | 5.20e-01 | 100.0% | 90.0% |
| 3249654 | 604.5.1.32 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › TMEM120A-B | 0.65 | 47.0 | 4.26e-01 | 88.5% | 57.5% |
| 3957435 | 5058.1.1.2 ↗ | alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st | 0.64 | 54.0 | 4.28e-01 | 96.7% | 46.7% |
| 4977432 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.64 | 52.0 | 3.11e-01 | 100.0% | 12.8% |
| 4259729 | 3755.3.1.295 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › WWC1 | 0.63 | 47.0 | 3.60e-01 | 78.7% | 35.6% |
| 3628093 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.62 | 48.0 | 3.90e-01 | 82.0% | 46.7% |
| 3964729 | 5038.1.1.2 ↗ | alpha superhelices › Cytochrome c oxidase subunit I-like › Cytochrome c oxidase subunit I-like › Cytochrome c oxidase subunit I-like › NnrS | 0.62 | 56.0 | 3.41e-01 | 100.0% | 76.0% |
| 4016091 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.62 | 55.0 | 4.93e-01 | 100.0% | 72.9% |
| 3512653 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.61 | 50.0 | 5.22e-01 | 93.4% | 98.2% |
| 3262083 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.59 | 47.0 | 3.90e-01 | 95.1% | 49.5% |
| 4408647 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.59 | 49.0 | 3.99e-01 | 88.5% | 51.4% |
| 3769015 | 130.1.1.2 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › LEM | 0.58 | 45.0 | 4.90e-01 | 86.9% | 100.0% |
| 3923614 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.58 | 53.0 | 3.85e-01 | 100.0% | 40.0% |
| 3171253 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.58 | 49.0 | 2.89e-01 | 100.0% | 11.0% |
| 3896730 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.57 | 48.0 | 3.64e-01 | 90.2% | 60.0% |
| 3523336 | 174.1.1.12 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › BCLP | 0.57 | 50.0 | 3.65e-01 | 100.0% | 92.9% |
| 3925160 | 9.26.1.0 ↗ | beta barrels › Lipocalins/Streptavidin | 0.55 | 46.0 | 3.36e-01 | 98.4% | 67.4% |
| 3975557 | 3782.1.1.0 ↗ | a+b duplicates or obligate multimers › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related | 0.54 | 44.0 | 4.42e-01 | 95.1% | 90.8% |
| 4928145 | 547.1.1.1 ↗ | alpha duplicates or obligate multimers › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › Glutamyl tRNA-reductase dimerization domain › GlutR_dimer | 0.54 | 45.0 | 4.22e-01 | 100.0% | 98.8% |
| 4854416 | 5071.1.1.1 ↗ | alpha bundles › cytochrome bc1 complex 11 kDa protein-like › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › Non-heme 11 kDa protein of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) › UCR_hinge | 0.53 | 43.0 | 4.27e-01 | 100.0% | 89.1% |
| 4876530 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 47.0 | 4.21e-01 | 98.4% | 79.8% |
| 3811150 | 3525.1.1.1 ↗ | alpha arrays › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › Bromodomain-containing protein 4 ET domain › BET | 0.51 | 40.0 | 3.77e-01 | 88.5% | 72.0% |
D2
high
residues 94-165
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 56.0 | 5.54e-01 | 79.2% | 83.1% |
| 4xtvB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 45.0 | 5.27e-01 | 70.8% | 100.0% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 49.0 | 4.96e-01 | 76.4% | 94.4% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 57.0 | 5.69e-01 | 100.0% | 97.3% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 50.0 | 5.26e-01 | 100.0% | 96.9% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 48.0 | 4.83e-01 | 81.9% | 98.6% |
| 2diqA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 53.0 | 4.80e-01 | 97.2% | 69.0% |
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.63 | 53.0 | 4.16e-01 | 95.8% | 59.5% |
| 3lhnA00 | 2.40.128.640 | Mainly Beta › Beta Barrel › Lipocalin › | 0.63 | 44.0 | 3.92e-01 | 75.0% | 92.5% |
| 2i2lB02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 46.0 | 4.74e-01 | 79.2% | 85.3% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 44.0 | 4.75e-01 | 75.0% | 98.3% |
| 2gfuA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 50.0 | 4.14e-01 | 90.3% | 58.2% |
| 3tfmA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 42.0 | 3.81e-01 | 73.6% | 84.8% |
| 2dhkA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 41.0 | 3.80e-01 | 73.6% | 80.0% |
| 4b9wA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 42.0 | 4.56e-01 | 75.0% | 94.6% |
| 2w5eA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 39.0 | 3.92e-01 | 75.0% | 64.9% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.59 | 42.0 | 3.09e-01 | 75.0% | 51.0% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 40.0 | 4.26e-01 | 70.8% | 93.5% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.59 | 43.0 | 4.64e-01 | 77.8% | 100.0% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 42.0 | 3.66e-01 | 76.4% | 76.5% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 41.0 | 4.52e-01 | 72.2% | 100.0% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.59 | 50.0 | 4.11e-01 | 94.4% | 76.3% |
| 8ornD01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.58 | 41.0 | 3.10e-01 | 73.6% | 88.6% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 45.0 | 3.79e-01 | 84.7% | 52.4% |
| 3ec6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 43.0 | 3.65e-01 | 81.9% | 50.0% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 44.0 | 3.83e-01 | 83.3% | 94.6% |
| 4ybnB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 44.0 | 3.20e-01 | 83.3% | 38.5% |
| 3gasB02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 43.0 | 3.32e-01 | 81.9% | 43.5% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.57 | 39.0 | 3.89e-01 | 72.2% | 75.0% |
| 2i51B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 41.0 | 3.12e-01 | 79.2% | 41.9% |
| 1rfeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 3.51e-01 | 81.9% | 50.7% |
| 2ol5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 3.25e-01 | 83.3% | 45.4% |
| 2ig6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 3.48e-01 | 83.3% | 46.2% |
| 2aq6A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 43.0 | 3.47e-01 | 83.3% | 48.3% |
| 2eixA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.56 | 44.0 | 3.93e-01 | 87.5% | 93.4% |
| 4qv2A02 | 2.40.30.120 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Positive stranded ssRNA viruses | 0.56 | 42.0 | 3.62e-01 | 81.9% | 93.2% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 42.0 | 3.53e-01 | 83.3% | 54.5% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.55 | 39.0 | 3.27e-01 | 76.4% | 70.2% |
| 2asfA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 3.55e-01 | 83.3% | 53.6% |
| 2gpjA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.55 | 42.0 | 3.87e-01 | 86.1% | 99.0% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 42.0 | 3.47e-01 | 83.3% | 92.7% |
| 4innA00 | 2.40.128.520 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 40.0 | 3.25e-01 | 79.2% | 86.3% |
| 3stjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 36.0 | 3.49e-01 | 72.2% | 58.8% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 39.0 | 3.08e-01 | 77.8% | 49.4% |
| 1a8pA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 42.0 | 3.87e-01 | 86.1% | 100.0% |
| 3ef2A02 | 3.30.460.70 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.54 | 39.0 | 3.28e-01 | 80.6% | 84.8% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 43.0 | 3.52e-01 | 87.5% | 55.6% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.54 | 42.0 | 3.40e-01 | 86.1% | 95.1% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 41.0 | 3.37e-01 | 84.7% | 48.6% |
| 4ksnA00 | 6.20.250.80 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.53 | 37.0 | 3.88e-01 | 73.6% | 95.4% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.53 | 42.0 | 3.08e-01 | 93.1% | 81.2% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.53 | 42.0 | 3.58e-01 | 90.3% | 55.6% |
| 4chmB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 37.0 | 3.22e-01 | 77.8% | 79.8% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 41.0 | 3.45e-01 | 88.9% | 57.5% |
| 1t3qC02 | 3.30.465.10 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › | 0.51 | 43.0 | 3.73e-01 | 97.2% | 94.1% |
| 6heiA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.51 | 40.0 | 2.69e-01 | 91.7% | 27.6% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 39.0 | 3.36e-01 | 95.8% | 51.7% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1405101 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.70 | 47.0 | 5.43e-01 | 77.8% | 100.0% |
| 145704 | 4.1.1.28 ↗ | beta barrels › SH3 › SH3 › SH3 › BPL_C | 0.70 | 47.0 | 5.21e-01 | 76.4% | 87.9% |
| 5029031 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 51.0 | 5.49e-01 | 80.6% | 98.3% |
| 3622055 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 54.0 | 5.15e-01 | 97.2% | 75.3% |
| 3508441 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.67 | 58.0 | 5.29e-01 | 97.2% | 75.8% |
| 4029057 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.66 | 46.0 | 4.05e-01 | 72.2% | 86.7% |
| 3503815 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.66 | 55.0 | 5.25e-01 | 97.2% | 78.8% |
| 3924149 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 42.0 | 4.75e-01 | 72.2% | 100.0% |
| 3279607 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.63 | 45.0 | 4.06e-01 | 76.4% | 100.0% |
| 3658643 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.62 | 55.0 | 4.39e-01 | 100.0% | 88.3% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.61 | 50.0 | 4.56e-01 | 90.3% | 90.5% |
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.61 | 49.0 | 5.00e-01 | 88.9% | 100.0% |
| 3910727 | 4.1.1.353 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_TNRC18 | 0.61 | 45.0 | 4.71e-01 | 81.9% | 100.0% |
| 3932851 | 220.1.1.46 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 | 0.61 | 42.0 | 3.62e-01 | 73.6% | 80.0% |
| 5030093 | 4.1.1.301 ↗ | beta barrels › SH3 › SH3 › SH3 › MJ1316 | 0.60 | 46.0 | 4.61e-01 | 86.1% | 92.0% |
| 3593636 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 42.0 | 3.69e-01 | 73.6% | 84.5% |
| 3290558 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.60 | 47.0 | 3.71e-01 | 86.1% | 45.8% |
| 3592541 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 47.0 | 4.57e-01 | 86.1% | 80.0% |
| 3927663 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 42.0 | 4.38e-01 | 75.0% | 84.6% |
| 3390005 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.59 | 42.0 | 3.48e-01 | 75.0% | 76.3% |
| 3961371 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.59 | 42.0 | 4.13e-01 | 76.4% | 87.5% |
| 3925408 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 4.51e-01 | 70.8% | 100.0% |
| 3465976 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 47.0 | 4.90e-01 | 90.3% | 96.9% |
| 182106 | 220.1.1.46 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 | 0.58 | 41.0 | 3.35e-01 | 73.6% | 76.3% |
| 3900957 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 41.0 | 3.42e-01 | 75.0% | 63.1% |
| 3933782 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.58 | 46.0 | 4.42e-01 | 88.9% | 100.0% |
| 4028811 | 10.13.1.0 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A | 0.58 | 41.0 | 3.57e-01 | 75.0% | 76.5% |
| 3279818 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.57 | 44.0 | 3.54e-01 | 84.7% | 45.8% |
| 4027872 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 39.0 | 3.63e-01 | 72.2% | 82.1% |
| 4658432 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.56 | 43.0 | 3.58e-01 | 84.7% | 60.0% |
| 4999024 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.56 | 43.0 | 3.23e-01 | 84.7% | 37.8% |
| 3388199 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.56 | 43.0 | 3.32e-01 | 83.3% | 44.1% |
| 4129418 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 42.0 | 3.49e-01 | 81.9% | 52.6% |
| 3928361 | 220.1.1.46 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 | 0.56 | 40.0 | 3.28e-01 | 75.0% | 78.6% |
| 3960580 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.56 | 43.0 | 3.42e-01 | 83.3% | 46.7% |
| 3292855 | 220.1.1.36 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 | 0.56 | 40.0 | 3.43e-01 | 77.8% | 72.8% |
| 3931993 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 42.0 | 4.40e-01 | 84.7% | 100.0% |
| 3950388 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 43.0 | 3.50e-01 | 86.1% | 46.6% |
| 4928754 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 42.0 | 3.38e-01 | 83.3% | 48.7% |
| 4400460 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 42.0 | 3.48e-01 | 84.7% | 50.7% |
| 5004573 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.55 | 42.0 | 3.39e-01 | 84.7% | 48.3% |
| 4015499 | 1.1.5.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx,PNP_phzG_C | 0.54 | 42.0 | 3.00e-01 | 84.7% | 79.4% |
| 4977763 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.54 | 41.0 | 3.28e-01 | 83.3% | 45.2% |
| 3646521 | 4.2.1.4 ↗ | beta barrels › SH3 › SAND › SAND › TDBD | 0.54 | 38.0 | 3.84e-01 | 75.0% | 89.3% |
| 3057477 | 220.1.1.146 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_NDK7_N | 0.54 | 39.0 | 3.63e-01 | 76.4% | 87.9% |
| 3473704 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 39.0 | 3.70e-01 | 76.4% | 98.8% |
| 4956437 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.54 | 38.0 | 3.11e-01 | 77.8% | 39.3% |
| 4008655 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 41.0 | 3.33e-01 | 83.3% | 46.9% |
| 3828657 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 41.0 | 3.82e-01 | 87.5% | 99.0% |
| 4947401 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 43.0 | 3.41e-01 | 88.9% | 54.2% |
| 3953421 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 40.0 | 3.34e-01 | 84.7% | 50.7% |
| 4997723 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 42.0 | 3.35e-01 | 88.9% | 53.5% |
| 4981706 | 1.1.5.31 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pyridox_ox_2 | 0.53 | 42.0 | 3.36e-01 | 88.9% | 54.5% |
| 4944685 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.52 | 41.0 | 3.35e-01 | 88.9% | 53.3% |
| 4514555 | 1.1.5.18 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › FMN_bind_2 | 0.52 | 41.0 | 3.08e-01 | 88.9% | 47.2% |
| 3211769 | 376.1.6.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain | 0.51 | 36.0 | 3.94e-01 | 75.0% | 93.3% |
| 3920985 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.51 | 40.0 | 2.66e-01 | 93.1% | 34.5% |