←Back to structures
Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00044
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00044
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-179
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_0-10091_curated_closed_complete_start-adj_prodigal-single.1__X__X__00351__D1-160
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6aefA01 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.61 | 31.0 | 2.76e-01 | 86.1% | 32.1% |
| 4akrA02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.58 | 41.0 | 4.35e-01 | 89.6% | 83.0% |
| 2bjoA02 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.55 | 23.0 | 2.98e-01 | 74.0% | 64.9% |
| 2ha9B00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.53 | 37.0 | 2.84e-01 | 72.3% | 71.6% |
| 3ubgB01 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.53 | 27.0 | 3.48e-01 | 92.5% | 86.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4827615 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.62 | 31.0 | 3.54e-01 | 86.1% | 61.2% |
| 3288774 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.57 | 33.0 | 2.88e-01 | 92.5% | 36.2% |
| 3737218 | 859.1.1.3 ↗ | a+b two layers › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › The spindle assembly checkpoint protein mad2 › ATG101 | 0.50 | 35.0 | 3.52e-01 | 72.8% | 69.7% |
D2
high
residues 186-358
Domain cluster:
rep: RifSed_csp1_19ft_3_scaffold_4_curated_prodigal-single.1__X__X__00124__D148-337
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.61 | 37.0 | 4.62e-01 | 92.5% | 100.0% |
| 2cmrA00 | 1.20.58.1860 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.61 | 46.0 | 4.49e-01 | 100.0% | 70.3% |
| 1udyA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.59 | 29.0 | 3.36e-01 | 94.2% | 63.3% |
| 3gw4A00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.58 | 30.0 | 2.94e-01 | 95.4% | 42.7% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.58 | 33.0 | 4.23e-01 | 81.5% | 99.0% |
| 2jifA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.57 | 28.0 | 3.27e-01 | 79.2% | 63.6% |
| 2jqqA00 | 1.20.58.1240 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 36.0 | 3.81e-01 | 98.3% | 70.1% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.56 | 36.0 | 4.06e-01 | 91.9% | 81.5% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 39.0 | 4.38e-01 | 92.5% | 93.8% |
| 6vvoE02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.56 | 33.0 | 4.15e-01 | 83.2% | 100.0% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.56 | 33.0 | 4.11e-01 | 90.8% | 97.1% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 34.0 | 4.17e-01 | 86.7% | 100.0% |
| 4ib4A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 43.0 | 3.67e-01 | 81.5% | 93.0% |
| 3pfdA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.55 | 26.0 | 3.12e-01 | 78.0% | 63.4% |
| 2lyiA01 | 1.10.274.60 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain | 0.55 | 37.0 | 3.95e-01 | 80.9% | 78.4% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.54 | 43.0 | 3.26e-01 | 82.7% | 55.7% |
| 2c12A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.54 | 28.0 | 3.26e-01 | 90.2% | 64.6% |
| 3uonA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 41.0 | 3.52e-01 | 79.8% | 92.5% |
| 2mx8A01 | 1.10.274.70 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain | 0.54 | 34.0 | 3.99e-01 | 83.8% | 94.7% |
| 4jkvB02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.52 | 40.0 | 3.21e-01 | 79.2% | 82.8% |
| 6wbvA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 41.0 | 3.13e-01 | 85.5% | 90.4% |
| 2vk9A04 | 1.10.274.80 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › | 0.51 | 24.0 | 2.97e-01 | 93.1% | 70.2% |
| 4l6rA02 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.51 | 40.0 | 3.41e-01 | 83.8% | 87.0% |
| 5domA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.50 | 25.0 | 3.30e-01 | 78.0% | 87.8% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4994389 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.60 | 34.0 | 2.99e-01 | 83.2% | 37.2% |
| 3484828 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.57 | 45.0 | 4.70e-01 | 96.5% | 91.0% |
| 4927302 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.57 | 36.0 | 3.95e-01 | 76.3% | 77.9% |
| 5018995 | 1079.1.1.5 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 | 0.56 | 44.0 | 4.07e-01 | 81.5% | 83.6% |
| 3298600 | 174.1.1.45 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › MENTAL | 0.55 | 42.0 | 4.49e-01 | 98.3% | 91.3% |
| 3820970 | 611.9.1.4 ↗ | alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N | 0.55 | 28.0 | 3.23e-01 | 85.0% | 65.2% |
| 3251944 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.54 | 41.0 | 3.51e-01 | 78.6% | 87.7% |
| 3177312 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.54 | 39.0 | 4.28e-01 | 98.3% | 91.4% |
| 3368220 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.54 | 38.0 | 3.21e-01 | 77.5% | 42.5% |
| 3609431 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.54 | 38.0 | 3.79e-01 | 77.5% | 68.3% |
| 3687402 | 192.15.1.81 ↗ | alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains › EMP70 | 0.54 | 38.0 | 3.92e-01 | 77.5% | 73.5% |
| 3660383 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.54 | 38.0 | 3.72e-01 | 77.5% | 65.9% |
| 3719306 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.54 | 38.0 | 3.47e-01 | 77.5% | 53.5% |
| 3204638 | 3567.1.1.104 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer › EMP70 | 0.54 | 38.0 | 3.92e-01 | 77.5% | 75.2% |
| 3950431 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.54 | 41.0 | 4.51e-01 | 86.7% | 97.1% |
| 3728252 | 633.23.1.22 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › MARVEL | 0.54 | 41.0 | 4.29e-01 | 100.0% | 88.4% |
| 3711300 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.53 | 34.0 | 3.57e-01 | 86.7% | 69.0% |
| 3739720 | 192.29.1.52 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Anthrone_oxy | 0.53 | 35.0 | 3.75e-01 | 92.5% | 76.0% |
| 3894738 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.53 | 43.0 | 3.21e-01 | 87.9% | 88.0% |
| 3417891 | 633.21.1.18 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CASP_dom | 0.52 | 39.0 | 4.06e-01 | 98.3% | 87.0% |
| 3936095 | 1075.1.2.12 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › EMP70 | 0.52 | 36.0 | 3.08e-01 | 77.5% | 43.2% |