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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00130

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00130

Identity

Kingdom:
phage

Quality

79.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-127
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3h41A02 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 37.0 4.83e-01 95.2% 97.1%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 38.0 4.66e-01 96.0% 94.6%
7pzaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 37.0 3.85e-01 100.0% 59.8%
4avaA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 37.0 3.60e-01 99.2% 50.7%
3dv8A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 36.0 3.52e-01 99.2% 53.2%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.60 29.0 4.06e-01 86.5% 100.0%
3dn7A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 36.0 3.48e-01 99.2% 52.4%
1o5lA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 36.0 3.63e-01 99.2% 58.9%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 33.0 3.98e-01 91.3% 84.6%
2pqqA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 37.0 3.50e-01 100.0% 54.4%
3iwzA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.58 36.0 3.57e-01 99.2% 58.2%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.58 33.0 3.67e-01 88.1% 72.0%
2v3sA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.52 28.0 3.14e-01 83.3% 64.6%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3396896 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.73 35.0 4.55e-01 88.1% 78.7%
4019005 10.12.1.30 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 3-HAO 0.67 31.0 3.55e-01 90.5% 56.8%
4118226 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 32.0 4.10e-01 87.3% 81.4%
3557677 4.1.1.1 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_1 0.65 35.0 4.55e-01 95.2% 94.3%
4201125 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.65 37.0 3.49e-01 99.2% 45.8%
4387111 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.60 36.0 4.25e-01 88.1% 91.3%
None — 0.60 29.0 2.45e-01 91.3% 28.5%
3363456 10.12.1.3 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_1 0.59 28.0 2.86e-01 90.5% 43.2%
4799851 4187.2.1.1 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.58 28.0 3.71e-01 87.3% 88.7%
3567641 4187.2.1.1 ↗ a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA 0.57 28.0 3.20e-01 87.3% 61.1%
3649433 11.8.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like 0.56 36.0 4.03e-01 96.8% 84.2%
3741925 10.12.1.1 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.56 34.0 3.25e-01 100.0% 49.0%
5036138 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.52 27.0 3.17e-01 90.5% 70.6%
4862637 10.12.1.29 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › CDO_I 0.51 33.0 3.24e-01 98.4% 59.4%