←Back to structures

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00132

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00132

Identity

Kingdom:
phage

Quality

88.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-72
PDB
Domain cluster: rep: S2_018_000_R2_scaffold_9_prodigal-single.1__X__X__00147__D4-72
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3a07B00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 52.0 4.46e-01 98.6% 95.8%
2fdbN00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.61 52.0 4.19e-01 100.0% 85.1%
2dx0A00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.59 34.0 2.90e-01 88.6% 32.5%
5g56A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 50.0 4.27e-01 100.0% 99.2%
3c12A01 2.30.30.910 Mainly Beta › Roll › SH3 type barrels. › 0.59 34.0 3.80e-01 97.1% 76.5%
1upsA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.59 49.0 4.13e-01 100.0% 95.5%
4izxA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.57 49.0 4.02e-01 100.0% 94.2%
6lciA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.55 46.0 3.82e-01 100.0% 100.0%
3jscA00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.55 38.0 3.50e-01 72.9% 96.9%
1f32A02 3.30.1120.50 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Pepsin inhibitor-3 0.54 31.0 3.27e-01 71.4% 61.7%
7qqfA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.54 37.0 2.44e-01 71.4% 93.6%
3kz5E00 6.10.140.1550 Special › Helix non-globular › Helix Hairpins › 0.52 27.0 3.29e-01 70.0% 77.1%
2kt9A01 3.30.390.140 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › 0.52 38.0 3.47e-01 100.0% 57.6%
3pgvA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.51 38.0 3.39e-01 80.0% 83.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589021 11.1.4.36 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › SpaA 0.66 47.0 3.98e-01 100.0% 44.2%
3669435 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 35.0 3.36e-01 100.0% 46.3%
3908634 6.1.1.29 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › CysR_MRC2_N 0.62 54.0 4.53e-01 100.0% 88.8%
3249251 6.1.1.0 ↗ beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.59 51.0 4.17e-01 100.0% 85.5%
4588401 101.1.2.582 ↗ alpha arrays › HTH › HTH › winged helix domain › PF30253 0.55 33.0 3.95e-01 90.0% 93.3%
3929937 389.1.1.9 ↗ few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › EGF_2 0.55 23.0 2.88e-01 78.6% 60.0%
3935178 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.50 37.0 3.11e-01 81.4% 91.9%
5070342 4043.1.1.2 ↗ a+b complex topology › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › C-terminal domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_7 0.50 34.0 3.14e-01 70.0% 61.1%