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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00152
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00152
Identity
- Kingdom:
- phage
Quality
92.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-26_53-107_131-160
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18167.7 best | Sa_NUDIX | 25.8 | 1.30e-05 | 60.4% | 31.0% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x8xX01 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.60 | 39.0 | 4.45e-01 | 83.8% | 94.7% |
| 2qdfA03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 37.0 | 4.29e-01 | 83.8% | 97.4% |
| 6j09A04 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.56 | 38.0 | 4.32e-01 | 81.1% | 100.0% |
| 2pqvB00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.55 | 44.0 | 3.87e-01 | 96.4% | 60.5% |
| 6j09A03 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 38.0 | 4.20e-01 | 80.2% | 100.0% |
| 4k6eA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 38.0 | 3.53e-01 | 86.5% | 59.0% |
| 6u7tA03 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 38.0 | 3.70e-01 | 86.5% | 69.4% |
| 5qoqA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 39.0 | 3.53e-01 | 87.4% | 58.4% |
| 2qjoB02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.52 | 42.0 | 3.87e-01 | 88.3% | 68.3% |
| 2rikA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 31.0 | 3.31e-01 | 83.8% | 68.5% |
| 4ifdI01 | 2.40.50.880 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 29.0 | 3.20e-01 | 84.7% | 67.4% |
| 3uuwB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 32.0 | 2.73e-01 | 77.5% | 37.0% |
| 4c0kA02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 36.0 | 3.08e-01 | 73.9% | 87.9% |
| 3a6sA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 37.0 | 3.57e-01 | 84.7% | 68.0% |
| 2x9zA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.51 | 39.0 | 3.95e-01 | 89.2% | 82.3% |
| 5cfjA00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 41.0 | 3.81e-01 | 86.5% | 69.3% |
| 2fkbC00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.51 | 40.0 | 3.58e-01 | 87.4% | 64.1% |
| 2wn5A01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.50 | 36.0 | 3.08e-01 | 75.7% | 62.4% |
| 4nfwF00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.50 | 39.0 | 3.50e-01 | 88.3% | 59.5% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3393465 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.59 | 48.0 | 4.99e-01 | 87.4% | 95.2% |
| 4499818 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.58 | 41.0 | 4.13e-01 | 85.6% | 71.3% |
| 4185820 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.58 | 42.0 | 4.05e-01 | 88.3% | 67.2% |
| 3963515 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.56 | 41.0 | 4.05e-01 | 86.5% | 72.2% |
| 3977403 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.56 | 40.0 | 3.93e-01 | 88.3% | 67.2% |
| 3471761 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.55 | 45.0 | 3.85e-01 | 91.0% | 61.6% |
| 3165564 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.55 | 37.0 | 3.51e-01 | 85.6% | 57.8% |
| 3895419 | 221.4.1.24 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 | 0.54 | 46.0 | 3.51e-01 | 98.2% | 76.2% |
| 3805402 | 221.4.1.24 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX, DUF4743 | 0.54 | 46.0 | 3.45e-01 | 98.2% | 71.9% |
| 4941147 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.54 | 43.0 | 3.98e-01 | 90.1% | 67.1% |
| 3386938 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.52 | 34.0 | 3.54e-01 | 91.9% | 71.2% |
| 3482809 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.51 | 44.0 | 3.27e-01 | 96.4% | 76.7% |
| 3989066 | 221.4.1.9 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 | 0.51 | 43.0 | 3.90e-01 | 91.0% | 74.7% |
| 168843 | 221.4.1.10 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › DUF4743 | 0.51 | 44.0 | 3.21e-01 | 92.8% | 65.2% |
| 4935762 | 221.4.1.1 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX | 0.50 | 41.0 | 3.73e-01 | 85.6% | 67.1% |
D2
medium
residues 27-52_108-130_161-201
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3j7ye00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.58 | 51.0 | 4.53e-01 | 100.0% | 91.8% |