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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00169

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00169

Identity

Kingdom:
phage

Quality

80.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 28-93
PDB
CATH (47)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 49.0 5.08e-01 83.3% 79.0%
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 4.93e-01 78.8% 77.4%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.50e-01 86.4% 68.1%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.65 46.0 4.56e-01 84.8% 70.4%
4ld6A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 51.0 4.28e-01 87.9% 69.2%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 48.0 5.03e-01 80.3% 86.9%
3l8kA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 40.0 3.29e-01 74.2% 33.9%
6jy5B00 2.40.50.220 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml 0.64 44.0 4.13e-01 72.7% 95.1%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 4.37e-01 77.3% 94.9%
1rl2A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 43.0 4.62e-01 81.8% 83.9%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.60 42.0 4.18e-01 72.7% 73.9%
1vq8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 43.0 4.14e-01 81.8% 64.1%
2e5wA01 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.60 35.0 3.72e-01 71.2% 66.1%
2hx0A01 3.30.1330.80 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Hypothetical protein, similar to alpha- acetolactate decarboxylase; domain 2 0.60 43.0 3.49e-01 87.9% 38.6%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 45.0 3.82e-01 83.3% 87.1%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 46.0 3.88e-01 86.4% 74.1%
2gl5A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.59 42.0 3.38e-01 75.8% 62.4%
5umsA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 42.0 3.76e-01 81.8% 61.8%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 44.0 3.50e-01 84.8% 75.4%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.56 38.0 3.72e-01 81.8% 64.8%
1z47A03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 37.0 4.12e-01 71.2% 89.8%
3go2A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.56 40.0 3.45e-01 78.8% 65.8%
3er7B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 38.0 3.13e-01 71.2% 63.4%
3c96A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 42.0 3.22e-01 86.4% 91.7%
6aonA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 40.0 3.27e-01 77.3% 58.5%
3c6kA02 2.30.140.10 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain 0.55 35.0 3.69e-01 71.2% 75.0%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 39.0 3.39e-01 77.3% 83.0%
2czoA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.55 39.0 3.25e-01 78.8% 59.2%
4fd7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.54 42.0 3.00e-01 90.9% 68.4%
2wweA01 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.54 38.0 3.35e-01 77.3% 82.7%
3ddmA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 41.0 3.38e-01 83.3% 69.6%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.53 38.0 3.08e-01 77.3% 86.4%
2xglA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.53 36.0 3.34e-01 72.7% 67.0%
4wjsA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 39.0 2.56e-01 84.8% 83.7%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.53 37.0 3.74e-01 81.8% 73.1%
3msyA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.53 39.0 3.34e-01 80.3% 69.4%
4glaC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 42.0 3.81e-01 87.9% 96.6%
2wtzA02 3.40.1190.10 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain 0.53 38.0 2.65e-01 77.3% 78.2%
4e4fA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 37.0 2.93e-01 74.2% 52.5%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.52 41.0 4.17e-01 90.9% 89.4%
6qpwA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 37.0 2.95e-01 84.8% 33.3%
2oqhA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.52 37.0 3.11e-01 74.2% 60.5%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.51 36.0 2.43e-01 75.8% 99.3%
3rcyB01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 35.0 2.83e-01 72.7% 56.7%
5c7qB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.51 39.0 2.95e-01 87.9% 61.1%
3mkcA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 39.0 3.14e-01 87.9% 59.0%
4bwgD00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.50 36.0 3.21e-01 75.8% 56.7%
ECOD (58)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3741680 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 48.0 5.22e-01 80.3% 83.6%
3886492 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.72 55.0 5.32e-01 83.3% 74.7%
5052257 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 46.0 4.82e-01 77.3% 76.7%
3743386 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.68 48.0 3.51e-01 75.8% 45.9%
4968816 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.67 49.0 4.32e-01 77.3% 88.4%
3941152 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 48.0 4.90e-01 87.9% 78.5%
3991065 4.1.1.334 beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.66 55.0 5.21e-01 92.4% 85.0%
3927411 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.66 44.0 5.02e-01 74.2% 100.0%
3709493 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.65 44.0 3.53e-01 81.8% 35.4%
3790904 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.65 47.0 4.91e-01 84.8% 83.3%
4399169 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.65 44.0 4.64e-01 81.8% 78.3%
4160115 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.64 44.0 3.58e-01 81.8% 37.6%
4504508 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.64 44.0 4.06e-01 81.8% 55.3%
5035086 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.64 43.0 4.52e-01 81.8% 78.3%
3604459 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.63 45.0 3.87e-01 77.3% 80.0%
3939881 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.63 46.0 4.50e-01 87.9% 70.7%
4014812 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.63 47.0 4.90e-01 80.3% 90.0%
3204055 4.8.1.1 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo 0.63 49.0 4.95e-01 84.8% 95.4%
3933293 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.62 46.0 4.92e-01 86.4% 89.7%
3694693 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.62 51.0 5.20e-01 90.9% 92.3%
4602962 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.62 42.0 3.27e-01 81.8% 31.3%
4002892 109.4.1.2561 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › FATC 0.62 42.0 2.44e-01 71.2% 8.5%
3991073 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.61 45.0 4.85e-01 80.3% 94.5%
4973274 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.61 44.0 4.70e-01 81.8% 90.9%
5074506 2.1.1.17 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_aCoA_assoc 0.61 44.0 3.95e-01 77.3% 81.9%
4149372 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 43.0 4.33e-01 77.3% 75.4%
1883336 1104.1.1.1 a+b complex topology › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › Helicase Cch N-terminal domain › DUF927 0.60 44.0 3.41e-01 77.3% 46.2%
2116605 206.1.1.7 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase 0.60 41.0 2.64e-01 71.2% 32.9%
3368743 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 45.0 4.65e-01 81.8% 100.0%
3443078 4.1.1.330 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O 0.59 53.0 3.89e-01 100.0% 60.6%
3286642 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 47.0 4.07e-01 90.9% 76.4%
3935835 2.1.1.68 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C 0.59 44.0 3.55e-01 83.3% 88.6%
162823 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.58 41.0 3.39e-01 72.7% 66.7%
5028066 2.1.1.2 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 0.58 41.0 4.20e-01 75.8% 75.4%
2464247 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.58 51.0 5.10e-01 97.0% 98.5%
5025423 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.58 43.0 3.64e-01 78.8% 70.0%
3834415 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.58 38.0 2.33e-01 71.2% 10.0%
3214162 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 46.0 4.81e-01 90.9% 95.0%
3365937 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.57 44.0 4.56e-01 86.4% 100.0%
4932880 330.3.1.0 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like 0.56 38.0 3.42e-01 71.2% 51.1%
4392321 218.1.1.1 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › MR_MLE_N 0.56 42.0 3.67e-01 83.3% 80.0%
4634274 218.1.1.0 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like 0.55 39.0 3.44e-01 75.8% 77.1%
3423537 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.55 45.0 2.85e-01 98.5% 68.9%
3677493 76.1.1.2 beta duplicates or obligate multimers › beta-Prism I › beta-Prism I › beta-Prism I › Jacalin 0.54 41.0 3.35e-01 81.8% 84.6%
4354219 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 39.0 3.44e-01 78.8% 77.0%
4103142 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.53 39.0 3.70e-01 80.3% 88.7%
3576376 7579.1.1.5 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 0.53 38.0 2.62e-01 77.3% 24.8%
4353121 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.53 40.0 3.53e-01 81.8% 78.0%
4278807 218.1.1.8 a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA 0.52 41.0 3.55e-01 87.9% 71.8%
4940942 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 38.0 3.51e-01 81.8% 64.5%
3884680 292.2.1.6 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › DUF4520 0.52 41.0 3.53e-01 89.4% 88.2%
3373579 5.1.4.304 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR11_2nd 0.52 39.0 2.51e-01 86.4% 48.6%
3952939 220.1.1.82 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_6 0.51 37.0 3.63e-01 81.8% 86.7%
3629697 5.1.3.183 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FG-GAP, FG-GAP_3 0.51 44.0 2.78e-01 100.0% 85.9%
3542914 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.50 40.0 3.33e-01 89.4% 48.3%
3958768 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 40.0 3.77e-01 87.9% 95.0%
4025365 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.50 38.0 3.35e-01 87.9% 60.0%
5002178 802.1.1.0 a+b two layers › Hypothetical protein TM0160 › Hypothetical protein TM0160 › Hypothetical protein TM0160 0.50 34.0 3.71e-01 84.8% 98.0%