Back to structures

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00201

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00201

Identity

Kingdom:
phage

Quality

84.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-134
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lphC00 6.10.140.630 Special › Helix non-globular › Helix Hairpins › 0.63 21.0 3.14e-01 72.8% 63.8%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.58 23.0 2.79e-01 100.0% 51.7%
1iurA01 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.52 27.0 3.67e-01 95.2% 100.0%
2vd3A03 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 31.0 3.91e-01 87.2% 100.0%
2rbdA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.51 36.0 3.44e-01 72.8% 98.7%
4ushA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 36.0 3.92e-01 90.4% 88.3%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 35.0 3.98e-01 73.6% 100.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5075555 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 30.0 3.11e-01 72.0% 53.9%
4976695 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.55 36.0 4.16e-01 89.6% 92.2%
3587109 304.5.1.7 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.53 35.0 4.05e-01 89.6% 92.2%
4243720 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.52 39.0 4.25e-01 89.6% 98.0%
3348136 304.110.1.4 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like › UPF0176_N 0.52 38.0 3.95e-01 87.2% 81.7%
4414821 304.56.1.2 a+b two layers › Alpha-beta plaits › CRISPR associated protein Cas2-like › CRISPR associated protein Cas2-like › CRISPR_Cas2 0.52 36.0 4.02e-01 89.6% 95.7%
3972361 304.5.1.0 a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.51 36.0 4.13e-01 92.0% 100.0%