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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00246
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00246
Identity
- Kingdom:
- phage
Quality
95.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 88-208
Domain cluster:
rep: IMGVR_UViG_3300029847_000221-3300029847-Ga0245281_1010432__D194-300
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00749.28 best | tRNA-synt_1c | 112.2 | 3.40e-32 | 100.0% | 38.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qruA04 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 1.00 | 88.0 | 9.33e-01 | 90.1% | 100.0% |
| 4h3sA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.97 | 95.0 | 6.46e-01 | 100.0% | 34.8% |
| 3aiiA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.93 | 85.0 | 6.11e-01 | 100.0% | 38.1% |
| 1nzjA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.70 | 56.0 | 5.34e-01 | 97.5% | 72.5% |
| 6b1pA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.66 | 46.0 | 5.32e-01 | 92.6% | 96.6% |
| 1g59A03 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.64 | 53.0 | 5.42e-01 | 92.6% | 90.5% |
| 4g6zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.64 | 51.0 | 3.73e-01 | 100.0% | 33.4% |
| 3afhA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.61 | 45.0 | 4.88e-01 | 92.6% | 89.4% |
| 4griA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.58 | 50.0 | 5.03e-01 | 92.6% | 91.1% |
| 2ja2A02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.56 | 48.0 | 4.87e-01 | 92.6% | 90.8% |
| 6b1zA02 | 3.90.800.10 | Alpha Beta › Alpha-Beta Complex › Glutamyl-tRNA Synthetase; domain 3 › Glutamyl-tRNA Synthetase; Domain 3 | 0.56 | 48.0 | 4.70e-01 | 92.6% | 91.5% |
ECOD (69)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3945215 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 1.00 | 98.0 | 8.62e-01 | 99.2% | 75.0% |
| 4161471 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 1.00 | 98.0 | 6.94e-01 | 100.0% | 40.3% |
| 2488186 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 1.00 | 75.0 | 8.66e-01 | 76.9% | 100.0% |
| 4940443 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.98 | 93.0 | 6.11e-01 | 100.0% | 28.9% |
| 4946736 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.98 | 92.0 | 6.92e-01 | 100.0% | 46.4% |
| 2495177 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.98 | 78.0 | 7.29e-01 | 84.3% | 69.0% |
| 5054969 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.98 | 93.0 | 7.46e-01 | 100.0% | 57.1% |
| 3293922 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.98 | 93.0 | 8.02e-01 | 100.0% | 68.8% |
| 4422421 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.97 | 91.0 | 6.34e-01 | 100.0% | 36.3% |
| 3552020 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.97 | 92.0 | 6.88e-01 | 100.0% | 46.8% |
| 3599195 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.97 | 91.0 | 6.95e-01 | 100.0% | 48.8% |
| 3619373 | 2005.1.1.6 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c,tRNA_synt_1c_R2 | 0.96 | 87.0 | 6.39e-01 | 100.0% | 41.5% |
| 4260563 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.96 | 89.0 | 6.25e-01 | 100.0% | 36.5% |
| 4089572 | 239.1.1.17 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c | 0.96 | 92.0 | 6.13e-01 | 100.0% | 30.9% |
| 3516835 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.96 | 80.0 | 8.67e-01 | 89.3% | 99.0% |
| 4947783 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.95 | 90.0 | 6.30e-01 | 100.0% | 36.3% |
| 4626249 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 91.0 | 6.08e-01 | 100.0% | 31.0% |
| 4218545 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.95 | 90.0 | 6.26e-01 | 100.0% | 35.8% |
| 4970422 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.95 | 89.0 | 7.19e-01 | 100.0% | 57.1% |
| 4050304 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.94 | 90.0 | 6.23e-01 | 100.0% | 36.5% |
| 4079544 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 90.0 | 6.23e-01 | 100.0% | 36.4% |
| 5066349 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.82 | 71.0 | 7.42e-01 | 95.0% | 99.1% |
| 3973680 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.72 | 59.0 | 4.29e-01 | 100.0% | 35.2% |
| 3978282 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.72 | 59.0 | 4.40e-01 | 100.0% | 38.1% |
| 4298869 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.69 | 58.0 | 3.83e-01 | 100.0% | 23.2% |
| None | — | 0.68 | 61.0 | 4.04e-01 | 100.0% | 25.1% | |
| 4667949 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 61.0 | 4.53e-01 | 100.0% | 41.1% |
| 4619918 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.67 | 59.0 | 3.88e-01 | 100.0% | 23.8% |
| None | — | 0.67 | 60.0 | 3.94e-01 | 100.0% | 24.6% | |
| None | — | 0.67 | 57.0 | 3.75e-01 | 100.0% | 23.7% | |
| None | — | 0.66 | 62.0 | 3.99e-01 | 100.0% | 25.0% | |
| 4348581 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.66 | 60.0 | 3.96e-01 | 100.0% | 25.1% |
| 3926117 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.65 | 59.0 | 3.89e-01 | 100.0% | 24.6% |
| None | — | 0.65 | 59.0 | 3.91e-01 | 100.0% | 27.0% | |
| None | — | 0.65 | 59.0 | 3.86e-01 | 100.0% | 24.6% | |
| 4248349 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.65 | 60.0 | 4.34e-01 | 100.0% | 38.2% |
| None | — | 0.65 | 58.0 | 3.78e-01 | 100.0% | 24.6% | |
| None | — | 0.65 | 58.0 | 3.89e-01 | 100.0% | 26.8% | |
| 4084568 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.64 | 58.0 | 4.14e-01 | 100.0% | 35.2% |
| 4536750 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.64 | 56.0 | 3.72e-01 | 100.0% | 25.6% |
| 4199049 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.64 | 58.0 | 3.88e-01 | 100.0% | 27.0% |
| 4662099 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 60.0 | 3.91e-01 | 100.0% | 25.5% |
| 4446314 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 59.0 | 3.81e-01 | 100.0% | 23.1% |
| 4391812 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 58.0 | 3.81e-01 | 100.0% | 24.0% |
| None | — | 0.64 | 60.0 | 3.90e-01 | 100.0% | 26.7% | |
| 3483507 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.64 | 58.0 | 4.16e-01 | 100.0% | 35.5% |
| None | — | 0.63 | 57.0 | 3.74e-01 | 100.0% | 25.1% | |
| 4056782 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 58.0 | 3.77e-01 | 100.0% | 23.3% |
| 4109031 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 55.0 | 3.68e-01 | 100.0% | 25.5% |
| None | — | 0.63 | 59.0 | 3.83e-01 | 100.0% | 24.7% | |
| None | — | 0.63 | 59.0 | 3.83e-01 | 100.0% | 25.7% | |
| 3431108 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.63 | 58.0 | 3.77e-01 | 100.0% | 23.3% |
| None | — | 0.63 | 58.0 | 3.80e-01 | 100.0% | 24.7% | |
| 4229262 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.63 | 59.0 | 4.51e-01 | 100.0% | 46.5% |
| None | — | 0.63 | 59.0 | 3.85e-01 | 100.0% | 26.6% | |
| None | — | 0.63 | 58.0 | 3.78e-01 | 100.0% | 24.6% | |
| 4437869 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.62 | 57.0 | 3.78e-01 | 100.0% | 25.0% |
| 3648718 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.62 | 58.0 | 4.13e-01 | 100.0% | 37.6% |
| 4629297 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.62 | 58.0 | 4.21e-01 | 100.0% | 38.7% |
| 4632887 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.62 | 58.0 | 4.17e-01 | 100.0% | 37.5% |
| 4088260 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.62 | 55.0 | 3.83e-01 | 100.0% | 32.5% |
| 4025786 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.62 | 56.0 | 3.67e-01 | 100.0% | 23.4% |
| None | — | 0.62 | 58.0 | 3.82e-01 | 100.0% | 28.4% | |
| None | — | 0.61 | 57.0 | 3.74e-01 | 100.0% | 25.7% | |
| None | — | 0.61 | 56.0 | 3.64e-01 | 100.0% | 23.8% | |
| 3507842 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.61 | 56.0 | 3.96e-01 | 100.0% | 34.3% |
| 4088162 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.60 | 57.0 | 3.67e-01 | 100.0% | 24.0% |
| None | — | 0.60 | 56.0 | 3.67e-01 | 100.0% | 25.8% | |
| 3958400 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.60 | 55.0 | 4.68e-01 | 100.0% | 63.8% |
D2
high
residues 332-454_506-525
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03950.24 best | tRNA-synt_1c_C | 89.5 | 1.90e-25 | 67.1% | 95.6% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qtqA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.96 | 71.0 | 8.25e-01 | 81.1% | 100.0% |
| 4h3sA02 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.87 | 71.0 | 7.77e-01 | 84.6% | 100.0% |
| 2hz7A05 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.87 | 69.0 | 7.30e-01 | 81.1% | 100.0% |
| 3aiiA03 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.84 | 52.0 | 6.50e-01 | 79.7% | 100.0% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4168337 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.95 | 73.0 | 7.85e-01 | 78.3% | 97.6% |
| 4084964 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.95 | 72.0 | 7.90e-01 | 77.6% | 94.2% |
| 4192882 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.95 | 67.0 | 7.89e-01 | 72.0% | 99.0% |
| 4352516 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.94 | 71.0 | 7.95e-01 | 76.9% | 97.4% |
| 1513036 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.93 | 65.0 | 7.60e-01 | 79.0% | 96.2% |
| 3592004 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.92 | 66.0 | 7.57e-01 | 75.5% | 94.5% |
| 3195557 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.91 | 88.0 | 6.50e-01 | 100.0% | 70.0% |
| 3551265 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.90 | 67.0 | 7.66e-01 | 76.9% | 98.2% |
| 4507630 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.90 | 88.0 | 6.51e-01 | 100.0% | 71.0% |
| 4085331 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.90 | 54.0 | 6.87e-01 | 76.2% | 96.7% |
| 3741813 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.89 | 67.0 | 7.62e-01 | 78.3% | 99.1% |
| 4942725 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.88 | 55.0 | 6.71e-01 | 77.6% | 93.7% |
| 3191369 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.88 | 66.0 | 7.00e-01 | 76.9% | 97.7% |
| 4946738 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.88 | 50.0 | 6.46e-01 | 73.4% | 95.3% |
| 3577757 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.87 | 67.0 | 7.16e-01 | 78.3% | 99.2% |
| 4381822 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.87 | 49.0 | 6.46e-01 | 74.1% | 96.5% |
| 5054095 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.87 | 48.0 | 6.30e-01 | 76.2% | 94.1% |
| 4024591 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.87 | 57.0 | 6.79e-01 | 76.2% | 95.0% |
| 5025145 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.86 | 48.0 | 6.44e-01 | 72.7% | 100.0% |
| 4164166 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.85 | 52.0 | 6.47e-01 | 76.9% | 96.7% |
| 3342335 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.85 | 57.0 | 6.77e-01 | 76.9% | 97.0% |
| 4508744 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.85 | 55.0 | 6.57e-01 | 76.2% | 94.0% |
| 4573501 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.84 | 50.0 | 6.12e-01 | 75.5% | 89.5% |
| 4947784 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.83 | 55.0 | 6.59e-01 | 76.2% | 96.0% |
| 4486733 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.83 | 57.0 | 6.76e-01 | 78.3% | 99.0% |
| 5057261 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.83 | 49.0 | 6.37e-01 | 73.4% | 100.0% |
| 3706839 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.83 | 56.0 | 6.67e-01 | 77.6% | 98.0% |
| 4932391 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.83 | 52.0 | 6.49e-01 | 76.9% | 100.0% |
| 5053809 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.83 | 55.0 | 6.60e-01 | 76.2% | 97.0% |
| 3598130 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.82 | 56.0 | 6.47e-01 | 77.6% | 94.3% |
| 5062724 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.82 | 48.0 | 6.15e-01 | 76.2% | 97.6% |
| 4277397 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.81 | 53.0 | 6.49e-01 | 77.6% | 100.0% |
| 4179040 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.81 | 55.0 | 6.54e-01 | 76.2% | 99.0% |
| 4970424 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.79 | 52.0 | 6.36e-01 | 75.5% | 100.0% |
| 4442467 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.79 | 50.0 | 6.06e-01 | 76.9% | 95.8% |
| 5037210 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.77 | 51.0 | 6.04e-01 | 77.6% | 96.0% |
| 5048201 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.77 | 51.0 | 6.09e-01 | 76.9% | 97.0% |
| 3580249 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.76 | 63.0 | 6.74e-01 | 85.3% | 98.4% |
| 3475469 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.76 | 55.0 | 6.23e-01 | 75.5% | 95.5% |
| 5000817 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.74 | 53.0 | 6.14e-01 | 76.2% | 99.0% |
| 3728868 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.74 | 53.0 | 6.06e-01 | 74.8% | 96.4% |
| 3183652 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.71 | 52.0 | 5.91e-01 | 75.5% | 100.0% |
| 4069101 | 239.1.1.3 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal_L25p | 0.58 | 37.0 | 4.36e-01 | 73.4% | 92.0% |
| 3714758 | 237.1.1.0 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation | 0.51 | 38.0 | 3.15e-01 | 76.2% | 91.4% |
D3
medium
residues 1-87_209-239
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00749.28 best | tRNA-synt_1c | 94.1 | 1.10e-26 | 61.9% | 21.7% |
CATH (80)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qrsA05 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.99 | 84.0 | 8.26e-01 | 86.4% | 92.7% |
| 4g6zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.92 | 79.0 | 5.61e-01 | 88.1% | 68.6% |
| 4h3sA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.92 | 89.0 | 6.02e-01 | 100.0% | 72.5% |
| 1j09A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.91 | 77.0 | 7.62e-01 | 87.3% | 90.9% |
| 3aiiA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 81.0 | 5.76e-01 | 100.0% | 73.5% |
| 3a04A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 79.0 | 6.04e-01 | 100.0% | 77.7% |
| 4a91A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 56.0 | 5.10e-01 | 73.7% | 53.3% |
| 3hzrA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 77.0 | 5.81e-01 | 100.0% | 74.9% |
| 1j1uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 74.0 | 6.15e-01 | 95.8% | 92.3% |
| 1n3lA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.82 | 76.0 | 6.20e-01 | 100.0% | 92.8% |
| 2j5bB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 74.0 | 6.18e-01 | 100.0% | 91.4% |
| 1jilA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.80 | 74.0 | 5.93e-01 | 100.0% | 93.2% |
| 2cycA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.79 | 72.0 | 5.78e-01 | 100.0% | 88.9% |
| 1r6uA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.79 | 72.0 | 5.54e-01 | 100.0% | 78.7% |
| 1y42X01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 72.0 | 5.45e-01 | 100.0% | 82.8% |
| 1h3fA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 73.0 | 6.04e-01 | 100.0% | 91.8% |
| 3focA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.78 | 72.0 | 5.31e-01 | 100.0% | 77.0% |
| 2pidA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.76 | 70.0 | 5.59e-01 | 100.0% | 93.9% |
| 3p0hB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.76 | 70.0 | 5.11e-01 | 100.0% | 46.4% |
| 2x0kA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.73 | 56.0 | 4.79e-01 | 80.5% | 69.4% |
| 4wnyA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.72 | 58.0 | 5.62e-01 | 84.7% | 94.7% |
| 6hcdD00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 56.0 | 5.34e-01 | 82.2% | 88.9% |
| 2z3vA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 56.0 | 5.33e-01 | 83.1% | 94.9% |
| 3mt0A00 | 3.40.50.12370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.71 | 63.0 | 4.69e-01 | 94.9% | 90.0% |
| 3hgmA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.71 | 56.0 | 5.20e-01 | 83.9% | 95.9% |
| 3s3tA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 55.0 | 5.18e-01 | 85.6% | 95.2% |
| 1jhdA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.68 | 55.0 | 4.59e-01 | 86.4% | 64.5% |
| 1rh9A00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.68 | 59.0 | 4.15e-01 | 95.8% | 83.5% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.66 | 53.0 | 5.18e-01 | 85.6% | 90.7% |
| 1kk1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 50.0 | 4.17e-01 | 78.8% | 52.0% |
| 1z5gA00 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.66 | 57.0 | 4.71e-01 | 94.9% | 75.0% |
| 2x6qA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.65 | 52.0 | 4.40e-01 | 85.6% | 86.3% |
| 3lm3A01 | 3.20.20.510 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Uncharacterised protein PF12979, DUF3863 | 0.64 | 54.0 | 3.99e-01 | 91.5% | 79.4% |
| 4qhrA02 | 3.20.20.10 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase | 0.63 | 45.0 | 3.73e-01 | 72.9% | 42.3% |
| 1wy5A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.63 | 54.0 | 4.48e-01 | 95.8% | 71.9% |
| 2efjA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 56.0 | 4.64e-01 | 100.0% | 67.3% |
| 5mn7A01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.62 | 41.0 | 3.72e-01 | 73.7% | 47.9% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 46.0 | 4.13e-01 | 77.1% | 58.0% |
| 4rshA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.62 | 44.0 | 3.85e-01 | 72.9% | 50.3% |
| 5djsA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 48.0 | 4.12e-01 | 84.7% | 66.0% |
| 4x7rA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 49.0 | 4.34e-01 | 86.4% | 95.3% |
| 3rkrA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 45.0 | 3.66e-01 | 78.0% | 60.2% |
| 4pqgA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 47.0 | 4.19e-01 | 84.7% | 94.3% |
| 2gs3A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 43.0 | 3.84e-01 | 74.6% | 73.1% |
| 2cjwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 44.0 | 3.89e-01 | 78.0% | 52.2% |
| 1bsvA02 | 3.90.25.10 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › UDP-galactose 4-epimerase, domain 1 | 0.60 | 33.0 | 3.66e-01 | 72.9% | 67.0% |
| 3a2kA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.60 | 52.0 | 4.99e-01 | 95.8% | 95.6% |
| 7zs9401 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.60 | 43.0 | 3.53e-01 | 76.3% | 43.0% |
| 3lloA00 | 3.30.750.24 | Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › STAS domain | 0.59 | 40.0 | 3.89e-01 | 76.3% | 61.4% |
| 2b3yA02 | 3.40.1060.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aconitase; Domain 2 › Aconitase, Domain 2 | 0.59 | 41.0 | 4.01e-01 | 71.2% | 95.3% |
| 1fcdA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.59 | 46.0 | 4.42e-01 | 84.7% | 87.1% |
| 3u61C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 36.0 | 3.26e-01 | 72.9% | 43.2% |
| 2vsnA02 | 3.40.50.11380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 45.0 | 3.70e-01 | 83.1% | 54.6% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.58 | 41.0 | 3.59e-01 | 75.4% | 47.5% |
| 1vkhA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 42.0 | 3.33e-01 | 78.0% | 51.7% |
| 1a9xA01 | 3.40.50.20 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 49.0 | 5.00e-01 | 95.8% | 96.6% |
| 1gv4A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.57 | 44.0 | 3.98e-01 | 83.1% | 92.2% |
| 3k1tA02 | 3.40.50.11280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutamate-cysteine ligase, N-terminal domain | 0.57 | 49.0 | 4.73e-01 | 100.0% | 82.7% |
| 2kg4A00 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.57 | 40.0 | 3.57e-01 | 72.9% | 71.5% |
| 6zxbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 37.0 | 3.65e-01 | 76.3% | 60.0% |
| 3oy2A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 44.0 | 3.59e-01 | 83.9% | 49.6% |
| 4l6wB01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.56 | 41.0 | 3.60e-01 | 75.4% | 82.2% |
| 2q9uA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 42.0 | 3.92e-01 | 78.0% | 71.7% |
| 4c6rA00 | 3.40.50.10140 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain | 0.56 | 42.0 | 3.83e-01 | 79.7% | 72.2% |
| 2aamC00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 48.0 | 3.70e-01 | 98.3% | 83.2% |
| 4ccsA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 45.0 | 4.46e-01 | 100.0% | 85.2% |
| 3eccA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 38.0 | 3.50e-01 | 73.7% | 52.5% |
| 1e5dA01 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 40.0 | 3.84e-01 | 78.0% | 69.2% |
| 1wekF01 | 3.40.50.450 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.54 | 44.0 | 3.78e-01 | 88.1% | 62.0% |
| 1rqeA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.54 | 48.0 | 3.63e-01 | 97.5% | 66.5% |
| 5nusA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.54 | 43.0 | 3.58e-01 | 86.4% | 90.5% |
| 3fokA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.53 | 47.0 | 3.58e-01 | 100.0% | 90.5% |
| 3kp1A04 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.53 | 42.0 | 3.86e-01 | 93.2% | 66.0% |
| 4l6wA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 38.0 | 3.18e-01 | 74.6% | 76.3% |
| 3g0tA03 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.53 | 42.0 | 3.52e-01 | 100.0% | 48.8% |
| 3iq0A00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 3.52e-01 | 100.0% | 59.9% |
| 2qcvA01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.53 | 47.0 | 3.62e-01 | 99.2% | 66.7% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.51 | 39.0 | 3.97e-01 | 83.1% | 94.2% |
| 3zeuB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 41.0 | 3.65e-01 | 86.4% | 74.4% |
| 3lhxA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 45.0 | 3.37e-01 | 99.2% | 63.3% |
ECOD (99)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4945212 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.98 | 81.0 | 6.19e-01 | 84.7% | 96.6% |
| 4161471 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.98 | 94.0 | 6.62e-01 | 98.3% | 80.3% |
| None | — | 0.95 | 82.0 | 5.22e-01 | 88.1% | 51.2% | |
| 4674396 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.95 | 82.0 | 5.65e-01 | 88.1% | 71.7% |
| 4165889 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.95 | 82.0 | 5.22e-01 | 88.1% | 51.2% |
| 4054700 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.95 | 81.0 | 5.91e-01 | 88.1% | 71.6% |
| 4536750 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.95 | 79.0 | 5.14e-01 | 86.4% | 49.2% |
| 4233833 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.94 | 80.0 | 5.12e-01 | 87.3% | 46.8% |
| None | — | 0.94 | 78.0 | 5.00e-01 | 85.6% | 46.6% | |
| None | — | 0.94 | 78.0 | 4.99e-01 | 85.6% | 46.6% | |
| 4199049 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.94 | 78.0 | 5.07e-01 | 85.6% | 50.6% |
| None | — | 0.94 | 79.0 | 5.05e-01 | 86.4% | 46.8% | |
| None | — | 0.94 | 80.0 | 5.11e-01 | 88.1% | 47.4% | |
| None | — | 0.94 | 78.0 | 4.92e-01 | 85.6% | 48.4% | |
| 4109031 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.94 | 78.0 | 5.03e-01 | 85.6% | 48.4% |
| 4338062 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.94 | 79.0 | 4.96e-01 | 86.4% | 48.2% |
| None | — | 0.94 | 78.0 | 5.05e-01 | 85.6% | 50.5% | |
| None | — | 0.94 | 82.0 | 5.22e-01 | 89.8% | 48.3% | |
| None | — | 0.94 | 78.0 | 5.04e-01 | 85.6% | 50.1% | |
| None | — | 0.94 | 80.0 | 5.08e-01 | 88.1% | 48.7% | |
| 4632887 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.94 | 79.0 | 5.52e-01 | 87.3% | 72.5% |
| None | — | 0.93 | 83.0 | 5.21e-01 | 91.5% | 48.1% | |
| 4391812 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 80.0 | 5.03e-01 | 88.1% | 46.9% |
| 4192177 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 80.0 | 5.23e-01 | 88.1% | 44.3% |
| 4417998 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 81.0 | 5.79e-01 | 89.8% | 75.9% |
| 4217211 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 77.0 | 5.05e-01 | 85.6% | 43.1% |
| 4229262 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 78.0 | 5.78e-01 | 86.4% | 89.6% |
| 4247133 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 81.0 | 5.49e-01 | 89.8% | 68.5% |
| 4088260 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 77.0 | 5.28e-01 | 85.6% | 61.7% |
| 4248349 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 81.0 | 5.62e-01 | 89.8% | 74.8% |
| None | — | 0.93 | 79.0 | 5.06e-01 | 88.1% | 48.0% | |
| 4609913 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 81.0 | 5.81e-01 | 90.7% | 71.9% |
| 4446314 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 81.0 | 5.04e-01 | 89.8% | 45.2% |
| 4480232 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 81.0 | 5.74e-01 | 89.8% | 70.8% |
| 4348581 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.93 | 81.0 | 5.12e-01 | 89.8% | 47.5% |
| 4645734 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 77.0 | 5.39e-01 | 85.6% | 73.0% |
| 4300539 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 79.0 | 5.70e-01 | 88.1% | 69.1% |
| 4667949 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 79.0 | 5.72e-01 | 88.1% | 78.6% |
| 4529252 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 77.0 | 5.44e-01 | 85.6% | 78.6% |
| 4050304 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 89.0 | 6.10e-01 | 100.0% | 75.4% |
| None | — | 0.92 | 80.0 | 5.08e-01 | 89.8% | 48.2% | |
| None | — | 0.92 | 80.0 | 5.06e-01 | 89.8% | 48.0% | |
| 4084568 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 81.0 | 5.61e-01 | 90.7% | 67.6% |
| None | — | 0.92 | 79.0 | 5.00e-01 | 89.0% | 47.6% | |
| 4662099 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 85.0 | 5.43e-01 | 95.8% | 51.1% |
| 3742058 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 80.0 | 5.08e-01 | 89.8% | 47.6% |
| 3978282 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 77.0 | 5.66e-01 | 86.4% | 76.3% |
| 4659912 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 80.0 | 5.16e-01 | 89.8% | 44.5% |
| 3552020 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 89.0 | 6.65e-01 | 100.0% | 93.2% |
| 4062902 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 81.0 | 5.14e-01 | 90.7% | 48.0% |
| 4437869 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 80.0 | 5.06e-01 | 89.8% | 48.5% |
| 4281438 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 80.0 | 5.78e-01 | 89.8% | 70.4% |
| None | — | 0.92 | 80.0 | 5.09e-01 | 89.8% | 48.4% | |
| 4940443 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 89.0 | 5.82e-01 | 100.0% | 57.0% |
| 3431108 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.92 | 82.0 | 5.16e-01 | 93.2% | 46.4% |
| 4602688 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.91 | 79.0 | 5.69e-01 | 89.8% | 74.6% |
| 4056782 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 79.0 | 4.97e-01 | 89.8% | 45.6% |
| None | — | 0.91 | 79.0 | 5.03e-01 | 89.8% | 48.2% | |
| 4422421 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.91 | 88.0 | 6.15e-01 | 100.0% | 71.9% |
| 4477990 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.91 | 80.0 | 5.55e-01 | 90.7% | 74.8% |
| 4340548 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.91 | 79.0 | 5.63e-01 | 89.8% | 78.2% |
| 4200628 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.91 | 83.0 | 5.76e-01 | 94.1% | 74.7% |
| 3483507 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 80.0 | 5.54e-01 | 91.5% | 70.1% |
| 3973680 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 79.0 | 5.69e-01 | 90.7% | 71.7% |
| 3621280 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.91 | 84.0 | 5.27e-01 | 95.8% | 48.0% |
| 3619373 | 2005.1.1.6 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c,tRNA_synt_1c_R2 | 0.90 | 87.0 | 6.40e-01 | 100.0% | 93.0% |
| 4260563 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.90 | 84.0 | 5.91e-01 | 96.6% | 71.4% |
| 3599195 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.90 | 87.0 | 6.63e-01 | 100.0% | 96.2% |
| None | — | 0.90 | 82.0 | 5.16e-01 | 94.1% | 47.9% | |
| 4076539 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.90 | 78.0 | 5.55e-01 | 89.8% | 69.4% |
| 4946736 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.90 | 87.0 | 6.52e-01 | 100.0% | 91.6% |
| 4619918 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.90 | 83.0 | 5.28e-01 | 95.8% | 47.8% |
| 4089572 | 239.1.1.17 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c | 0.90 | 83.0 | 5.56e-01 | 96.6% | 60.0% |
| 4088162 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.89 | 82.0 | 5.17e-01 | 95.8% | 48.5% |
| 4025786 | 101.8.1.5 ↗ | alpha arrays › HTH › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › An anticodon-binding domain of class I aminoacyl-tRNA synthetases › tRNA-synt_1c | 0.89 | 83.0 | 5.21e-01 | 96.6% | 47.4% |
| None | — | 0.89 | 82.0 | 5.22e-01 | 95.8% | 49.6% | |
| 4365844 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.86 | 69.0 | 5.77e-01 | 82.2% | 82.2% |
| 3009275 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.80 | 63.0 | 6.96e-01 | 96.6% | 97.0% |
| 4961918 | 2005.1.1.2 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b | 0.80 | 75.0 | 5.06e-01 | 100.0% | 49.1% |
| 2488503 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.75 | 57.0 | 6.38e-01 | 88.1% | 97.9% |
| 2528129 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.72 | 58.0 | 6.15e-01 | 87.3% | 91.6% |
| 2494136 | 2005.1.1.6 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c,tRNA_synt_1c_R2 | 0.70 | 66.0 | 6.40e-01 | 98.3% | 93.7% |
| 4453324 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.68 | 61.0 | 4.85e-01 | 100.0% | 66.9% |
| 4924741 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.68 | 56.0 | 4.91e-01 | 86.4% | 99.4% |
| 5083154 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.68 | 55.0 | 5.31e-01 | 87.3% | 92.6% |
| 4328387 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.67 | 58.0 | 4.65e-01 | 94.9% | 67.7% |
| 3702335 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.67 | 64.0 | 5.62e-01 | 98.3% | 75.0% |
| 4611545 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 60.0 | 4.81e-01 | 100.0% | 65.7% |
| 5036944 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 59.0 | 4.50e-01 | 98.3% | 92.4% |
| 4051591 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 59.0 | 4.75e-01 | 100.0% | 64.3% |
| 4635446 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.66 | 57.0 | 4.59e-01 | 95.8% | 67.4% |
| 5056384 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.65 | 52.0 | 4.39e-01 | 85.6% | 83.5% |
| 3174284 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.65 | 58.0 | 4.26e-01 | 99.2% | 80.9% |
| 4383441 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.65 | 58.0 | 4.33e-01 | 100.0% | 56.7% |
| 5035964 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.65 | 58.0 | 4.37e-01 | 100.0% | 90.7% |
| 4994415 | 2005.1.1.11 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ATP_bind_3 | 0.63 | 56.0 | 4.52e-01 | 100.0% | 68.3% |
| 3724057 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.63 | 54.0 | 3.42e-01 | 93.2% | 41.7% |
| 3192142 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.63 | 46.0 | 4.44e-01 | 77.1% | 69.6% |
| 3252327 | 2006.1.6.5 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › Tfb4 | 0.56 | 42.0 | 3.38e-01 | 78.0% | 39.1% |
D4
medium
residues 240-331
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00749.28 best | tRNA-synt_1c | 67.2 | 1.80e-18 | 94.6% | 24.2% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qtqA03 | 1.10.1160.10 | Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 | 0.99 | 83.0 | 9.02e-01 | 85.9% | 100.0% |
| 4h3sA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.88 | 82.0 | 5.34e-01 | 100.0% | 92.6% |
| 3aiiA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.84 | 70.0 | 4.77e-01 | 97.8% | 27.2% |
| 4g6zA01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.69 | 62.0 | 4.24e-01 | 96.7% | 32.1% |
| 6b1pA03 | 1.10.1160.10 | Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 | 0.64 | 50.0 | 5.28e-01 | 82.6% | 100.0% |
| 1j09A02 | 1.10.1160.10 | Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 | 0.62 | 49.0 | 5.07e-01 | 82.6% | 100.0% |
| 1e94E03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.52 | 40.0 | 3.88e-01 | 91.3% | 73.6% |
| 7o1rA01 | 1.10.489.10 | Mainly Alpha › Orthogonal Bundle › Chloroperoxidase › Chloroperoxidase-like | 0.51 | 39.0 | 3.10e-01 | 82.6% | 63.8% |
| 2a35A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 41.0 | 3.25e-01 | 90.2% | 71.6% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4161471 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 1.00 | 64.0 | 4.20e-01 | 92.4% | 20.0% |
| 4507630 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.99 | 86.0 | 5.62e-01 | 89.1% | 26.5% |
| 2489516 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.98 | 96.0 | 9.03e-01 | 100.0% | 87.6% |
| 4945214 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.97 | 86.0 | 6.49e-01 | 90.2% | 83.2% |
| 3410654 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.97 | 82.0 | 6.20e-01 | 87.0% | 42.6% |
| 3195557 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.97 | 83.0 | 5.40e-01 | 88.0% | 25.3% |
| 4078446 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.97 | 86.0 | 6.41e-01 | 91.3% | 76.4% |
| 3586242 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.96 | 82.0 | 6.58e-01 | 88.0% | 86.3% |
| 4001267 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.96 | 79.0 | 5.72e-01 | 84.8% | 36.3% |
| 3548643 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.96 | 80.0 | 7.63e-01 | 87.0% | 76.2% |
| 3194672 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.95 | 81.0 | 6.13e-01 | 88.0% | 79.3% |
| 4030356 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.95 | 80.0 | 5.79e-01 | 87.0% | 66.1% |
| 4015131 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.95 | 81.0 | 6.21e-01 | 88.0% | 81.7% |
| 4050304 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.95 | 89.0 | 5.70e-01 | 96.7% | 94.2% |
| 3610029 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.95 | 81.0 | 6.16e-01 | 89.1% | 80.0% |
| 3208388 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.94 | 80.0 | 5.80e-01 | 88.0% | 87.7% |
| 4940443 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.94 | 90.0 | 5.65e-01 | 100.0% | 22.7% |
| 5000816 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.93 | 77.0 | 8.21e-01 | 85.9% | 100.0% |
| 4079544 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 81.0 | 5.31e-01 | 97.8% | 25.5% |
| 4872437 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.93 | 67.0 | 6.36e-01 | 75.0% | 64.5% |
| 4422421 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.92 | 81.0 | 5.37e-01 | 92.4% | 26.6% |
| 4289144 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.92 | 80.0 | 8.31e-01 | 91.3% | 100.0% |
| 4201479 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.91 | 77.0 | 6.02e-01 | 88.0% | 85.1% |
| 3598131 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.91 | 77.0 | 5.96e-01 | 88.0% | 78.3% |
| 4437631 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.90 | 75.0 | 7.63e-01 | 89.1% | 88.9% |
| 4365844 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.90 | 85.0 | 6.50e-01 | 96.7% | 86.7% |
| 3513458 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.90 | 78.0 | 5.96e-01 | 90.2% | 80.5% |
| 4947783 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.89 | 81.0 | 5.33e-01 | 95.7% | 27.1% |
| 4964326 | 8002.1.1.0 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase | 0.88 | 76.0 | 7.89e-01 | 91.3% | 100.0% |
| 4932390 | 8002.1.1.0 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase | 0.86 | 70.0 | 7.49e-01 | 85.9% | 98.8% |
| 4218545 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.86 | 75.0 | 5.01e-01 | 93.5% | 26.7% |
| 5053808 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.86 | 71.0 | 7.55e-01 | 88.0% | 100.0% |
| 4946737 | 8002.1.1.4 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c_C | 0.86 | 67.0 | 7.37e-01 | 82.6% | 100.0% |
| 4367040 | 8002.1.1.0 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase | 0.86 | 73.0 | 7.58e-01 | 91.3% | 98.8% |
| 4260563 | 2005.1.1.5 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c | 0.85 | 77.0 | 5.21e-01 | 100.0% | 28.9% |
| 4089572 | 239.1.1.17 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c | 0.83 | 77.0 | 4.96e-01 | 100.0% | 34.5% |
| 4626249 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.83 | 77.0 | 4.96e-01 | 100.0% | 33.1% |
| 4940116 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.73 | 49.0 | 4.19e-01 | 87.0% | 44.1% |
| 5001838 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.71 | 49.0 | 4.14e-01 | 88.0% | 44.0% |
| 3593145 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.70 | 49.0 | 3.90e-01 | 90.2% | 36.2% |
| 4947187 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.69 | 46.0 | 3.73e-01 | 85.9% | 35.6% |
| 5037236 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.68 | 47.0 | 3.75e-01 | 87.0% | 36.1% |
| 4974076 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.68 | 47.0 | 3.76e-01 | 88.0% | 36.2% |
| 4579385 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.67 | 48.0 | 3.69e-01 | 88.0% | 34.0% |
| 4559002 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.66 | 45.0 | 3.86e-01 | 87.0% | 43.3% |
| 4619381 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.65 | 47.0 | 3.87e-01 | 90.2% | 43.1% |
| 4967877 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.64 | 52.0 | 3.86e-01 | 87.0% | 95.1% |
| 4992820 | 2005.1.1.125 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Anticodon_1 | 0.64 | 48.0 | 3.06e-01 | 96.7% | 15.0% |
| 4123327 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.61 | 50.0 | 3.62e-01 | 89.1% | 87.5% |
| 4327198 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.60 | 49.0 | 3.64e-01 | 89.1% | 98.7% |
| 5056085 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.59 | 50.0 | 3.84e-01 | 92.4% | 94.1% |
| 4420336 | 192.11.1.0 ↗ | alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB | 0.58 | 47.0 | 3.61e-01 | 87.0% | 95.2% |
| 4328528 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.58 | 47.0 | 4.02e-01 | 88.0% | 100.0% |
| 4530876 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.58 | 47.0 | 3.45e-01 | 87.0% | 88.3% |
| 5073605 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.58 | 46.0 | 3.73e-01 | 87.0% | 83.9% |
| 4313724 | 140.1.1.14 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e | 0.58 | 47.0 | 3.54e-01 | 88.0% | 68.6% |
| 4028305 | 140.1.1.8 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1g,Anticodon_3 | 0.58 | 47.0 | 3.56e-01 | 88.0% | 100.0% |
| 4134380 | 140.1.1.4 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA-synt_1e,DALR_2 | 0.57 | 47.0 | 4.16e-01 | 89.1% | 98.5% |
| 4989664 | 140.1.1.5 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_1 | 0.56 | 44.0 | 3.59e-01 | 85.9% | 84.4% |
| 4180021 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.55 | 42.0 | 4.15e-01 | 93.5% | 75.0% |
D5
medium
residues 455-505
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF20974.3 best | tRNA-synt_1c_C2 | 29.4 | 1.60e-06 | 100.0% | 57.1% |
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1qtqA02 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.91 | 86.0 | 6.86e-01 | 100.0% | 56.7% |
| 4h3sA03 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.87 | 80.0 | 6.05e-01 | 100.0% | 69.6% |
| 2hz7A04 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.82 | 75.0 | 6.08e-01 | 100.0% | 56.0% |
| 4p2bA04 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.82 | 72.0 | 6.10e-01 | 100.0% | 60.5% |
| 5cr4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.50 | 40.0 | 2.76e-01 | 98.0% | 88.4% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.92 | 87.0 | 6.04e-01 | 100.0% | 36.4% | |
| 4267250 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.92 | 86.0 | 6.04e-01 | 100.0% | 36.4% |
| 4078446 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.92 | 86.0 | 5.54e-01 | 100.0% | 27.7% |
| 4030356 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.90 | 85.0 | 5.34e-01 | 100.0% | 23.9% |
| 3195557 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.90 | 83.0 | 4.93e-01 | 100.0% | 24.4% |
| 4945214 | 239.1.1.5 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C | 0.90 | 83.0 | 5.46e-01 | 100.0% | 29.2% |
| 3208388 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.88 | 80.0 | 5.14e-01 | 100.0% | 42.7% |
| 4080304 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.85 | 76.0 | 6.22e-01 | 100.0% | 55.6% |
| 3599783 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.85 | 78.0 | 6.11e-01 | 100.0% | 51.0% |
| None | — | 0.80 | 73.0 | 5.67e-01 | 100.0% | 49.5% | |
| 4201479 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.72 | 58.0 | 4.08e-01 | 100.0% | 27.4% |
| 4012761 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 35.0 | 2.31e-01 | 72.5% | 73.7% |