Back to structures

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00250

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00250

Identity

Kingdom:
phage

Quality

75.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 34-89
PDB
Domain cluster: representative
CATH (88)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1ni9A01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.79 58.0 4.18e-01 78.6% 70.2%
4ikcA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.77 57.0 3.60e-01 78.6% 28.1%
2oc3A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.76 55.0 3.51e-01 78.6% 30.1%
1zc0A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.76 56.0 3.50e-01 78.6% 26.6%
1xteA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.75 58.0 4.53e-01 83.9% 59.5%
3p0cA00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.74 55.0 4.34e-01 78.6% 59.5%
3uoaB02 2.60.40.3360 Mainly Beta › Sandwich › Immunoglobulin-like › 0.74 61.0 4.55e-01 91.1% 69.1%
6krwA01 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.74 54.0 3.37e-01 78.6% 29.6%
1g4wR02 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.73 54.0 3.59e-01 78.6% 38.9%
1gyvA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.73 54.0 4.31e-01 82.1% 67.5%
2i1yA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.73 53.0 3.36e-01 78.6% 29.6%
1rerA01 2.60.98.10 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Tick-borne Encephalitis virus Glycoprotein, domain 1 0.73 55.0 4.24e-01 82.1% 60.3%
3qkgA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.72 54.0 3.91e-01 82.1% 34.1%
2ar5A00 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.72 56.0 4.42e-01 85.7% 65.8%
1n2bB02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.71 52.0 4.27e-01 78.6% 50.0%
7cymA04 2.60.40.60 Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins 0.71 53.0 4.36e-01 78.6% 82.5%
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.71 56.0 4.09e-01 87.5% 51.9%
2q7nA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.71 51.0 4.19e-01 76.8% 71.3%
3tqmA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.70 50.0 4.27e-01 75.0% 48.9%
2kt4B01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.70 56.0 4.14e-01 87.5% 38.0%
3cu3A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.70 51.0 3.75e-01 80.4% 62.3%
3voqA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.70 51.0 4.05e-01 78.6% 53.4%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.70 47.0 3.55e-01 73.2% 28.6%
2ownA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.69 54.0 3.49e-01 85.7% 37.5%
4o8sA01 3.10.450.620 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › JHP933, nucleotidyltransferase-like core domain 0.69 50.0 3.90e-01 78.6% 36.8%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.69 47.0 5.00e-01 73.2% 97.9%
1na8B00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.68 56.0 4.22e-01 94.6% 62.8%
7wffb01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.68 47.0 3.00e-01 76.8% 13.9%
3d85D02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.67 49.0 4.06e-01 80.4% 81.1%
4kz1A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.66 54.0 4.13e-01 92.9% 77.0%
2egjA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.66 52.0 4.09e-01 89.3% 92.9%
2dixA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.66 45.0 4.07e-01 71.4% 60.3%
4o3vA00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.66 54.0 4.15e-01 94.6% 72.5%
4gpvA02 2.60.40.3690 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 53.0 3.73e-01 89.3% 91.4%
3nqzA01 3.10.450.490 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 47.0 4.01e-01 75.0% 53.8%
1w8oA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 51.0 4.22e-01 85.7% 73.5%
2owpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 48.0 3.73e-01 80.4% 71.3%
4k15A00 2.60.40.3860 Mainly Beta › Sandwich › Immunoglobulin-like › 0.65 45.0 3.47e-01 73.2% 31.2%
3bnvD00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 50.0 3.76e-01 85.7% 76.9%
4k00A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.65 51.0 3.90e-01 87.5% 88.3%
1ye9A02 2.40.470.10 Mainly Beta › Beta Barrel › catalase hpii fold › catalase hpii domain 0.65 48.0 3.91e-01 82.1% 64.3%
3tp4B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 49.0 4.21e-01 83.9% 74.2%
3mnmA00 2.60.40.1230 Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain 0.64 49.0 3.98e-01 85.7% 72.3%
4i4kA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 46.0 3.59e-01 80.4% 71.7%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.25e-01 73.2% 89.4%
2hboA01 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 49.0 3.82e-01 87.5% 84.2%
3apuB00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 48.0 3.49e-01 87.5% 27.9%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 47.0 3.51e-01 82.1% 30.5%
1c8uA02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.63 46.0 3.74e-01 78.6% 87.8%
8d7eC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 42.0 3.77e-01 71.4% 81.0%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.63 43.0 4.27e-01 73.2% 70.0%
6rptC00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 48.0 3.86e-01 83.9% 71.4%
2cc3A00 3.10.450.230 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › VirB8 protein 0.62 52.0 4.01e-01 100.0% 38.9%
2hx5A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.62 48.0 3.68e-01 87.5% 89.5%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 43.0 4.09e-01 75.0% 67.6%
3fsdA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 46.0 3.70e-01 82.1% 81.0%
2nugB02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 42.0 3.95e-01 71.4% 69.0%
3d9rB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.62 48.0 3.77e-01 89.3% 46.6%
7jrmA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 47.0 4.30e-01 82.1% 71.6%
6f91A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.62 49.0 3.23e-01 92.9% 70.5%
2g16B00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.62 49.0 3.59e-01 91.1% 35.6%
2k4vA00 3.30.160.370 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 0.61 48.0 3.88e-01 92.9% 88.0%
5w17A01 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.61 49.0 3.69e-01 92.9% 64.0%
7pkwA01 3.10.450.540 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 46.0 3.92e-01 87.5% 62.1%
3h4zB03 3.15.10.50 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › 0.60 51.0 3.62e-01 100.0% 79.1%
8jx6A02 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 3.63e-01 78.6% 61.2%
3b7cA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 46.0 3.71e-01 87.5% 79.2%
4fqpA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 3.89e-01 83.9% 73.9%
3hzpA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 48.0 3.81e-01 94.6% 47.2%
1f21A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 44.0 3.29e-01 80.4% 100.0%
1hnfA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 45.0 4.10e-01 83.9% 75.9%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.59 45.0 2.95e-01 85.7% 63.8%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 45.0 2.69e-01 89.3% 14.8%
4cbpA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 46.0 3.79e-01 91.1% 69.1%
1njkA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 47.0 3.72e-01 98.2% 82.0%
1b4rA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 43.0 3.92e-01 83.9% 77.5%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.57 40.0 3.17e-01 76.8% 52.3%
2oz4A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 42.0 3.61e-01 83.9% 100.0%
4d9uA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 38.0 3.41e-01 78.6% 46.6%
8gsxA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 39.0 2.99e-01 76.8% 76.8%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.56 38.0 3.77e-01 75.0% 71.4%
2if7B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 40.0 3.53e-01 78.6% 73.6%
3s95A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 36.0 3.26e-01 78.6% 44.3%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.55 40.0 3.42e-01 80.4% 83.5%
3abiA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 39.0 2.94e-01 82.1% 95.5%
1bqsA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.33e-01 89.3% 78.2%
8begA01 2.60.40.740 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 37.0 2.82e-01 76.8% 83.9%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.50 39.0 3.20e-01 87.5% 64.2%
ECOD (97)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3386770 243.1.1.8 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC 0.82 63.0 4.41e-01 82.1% 69.1%
3483990 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.80 58.0 3.58e-01 76.8% 26.3%
3709549 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.80 60.0 4.23e-01 80.4% 41.8%
3244242 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.79 58.0 3.54e-01 78.6% 14.5%
3583473 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.79 58.0 3.56e-01 78.6% 17.1%
3627099 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.78 57.0 3.57e-01 78.6% 18.0%
3243901 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.78 57.0 3.52e-01 78.6% 14.5%
4586017 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.77 54.0 4.29e-01 75.0% 46.1%
3234839 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.76 55.0 3.44e-01 76.8% 27.7%
3925961 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.76 56.0 3.45e-01 78.6% 14.0%
4418351 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.76 56.0 4.49e-01 76.8% 58.1%
None 0.76 56.0 3.47e-01 78.6% 14.2%
3517413 2007.2.3.21 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase, PTP-SAK 0.76 56.0 3.49e-01 78.6% 27.5%
4932637 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.75 53.0 4.54e-01 75.0% 53.3%
3580028 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.75 54.0 3.77e-01 78.6% 44.7%
4025190 3256.1.1.0 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain 0.75 58.0 5.84e-01 85.7% 85.5%
3282696 243.1.1.80 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 0.75 56.0 4.65e-01 82.1% 75.0%
4976921 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.74 59.0 3.57e-01 85.7% 19.7%
3288884 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.73 51.0 4.13e-01 80.4% 39.0%
4228218 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.73 51.0 3.91e-01 75.0% 36.1%
3718216 4051.1.1.0 a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz 0.73 51.0 3.99e-01 75.0% 64.0%
3655368 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.73 51.0 4.69e-01 75.0% 62.7%
3286982 330.6.1.0 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.73 51.0 4.21e-01 75.0% 42.3%
3531262 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.73 53.0 3.34e-01 78.6% 27.9%
3251342 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.73 56.0 4.31e-01 82.1% 60.0%
3288112 243.1.1.69 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF6459 0.73 55.0 4.43e-01 82.1% 77.1%
4648747 243.3.1.8 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3889 0.73 54.0 4.92e-01 80.4% 80.0%
3581353 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.73 53.0 3.32e-01 78.6% 26.6%
4930408 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.72 54.0 4.53e-01 82.1% 82.0%
3479746 2007.2.3.0 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II 0.72 52.0 3.29e-01 78.6% 31.1%
3246533 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.72 52.0 3.23e-01 78.6% 14.2%
5079413 5.1.3.272 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SBBP 0.71 49.0 3.16e-01 73.2% 23.4%
3500787 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.71 51.0 3.25e-01 76.8% 16.1%
3171541 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.71 53.0 4.09e-01 82.1% 43.4%
3213198 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.71 51.0 3.24e-01 78.6% 27.7%
3420092 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.71 49.0 4.45e-01 75.0% 57.5%
4558873 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.70 51.0 3.75e-01 78.6% 64.5%
3863194 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.70 55.0 4.21e-01 85.7% 57.7%
4883232 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.70 48.0 3.07e-01 73.2% 27.8%
3233978 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.70 50.0 3.17e-01 76.8% 15.7%
3542147 277.1.1.1 a+b two layers › PX domain › PX domain › PX domain › PX 0.69 54.0 3.99e-01 83.9% 50.7%
5024241 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.69 48.0 4.10e-01 75.0% 55.8%
4422887 283.1.1.3 a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase › Pantoate_ligase 0.69 49.0 4.09e-01 76.8% 51.0%
3333973 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.69 50.0 3.89e-01 80.4% 83.1%
3222596 264.2.1.1 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain › Topoisom_bac 0.68 49.0 3.72e-01 76.8% 56.3%
3472865 264.2.1.0 beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.68 47.0 3.65e-01 71.4% 34.1%
3587070 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 49.0 3.64e-01 76.8% 60.7%
4955051 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 52.0 4.30e-01 83.9% 49.0%
5036065 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 49.0 4.51e-01 78.6% 61.3%
3258675 4026.1.1.0 a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.67 49.0 3.66e-01 78.6% 35.0%
4268461 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.67 46.0 4.06e-01 73.2% 69.4%
3220419 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.67 52.0 4.23e-01 87.5% 70.0%
4959998 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 50.0 4.09e-01 82.1% 58.1%
3223862 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.66 49.0 3.35e-01 80.4% 38.5%
147044 3256.1.1.1 a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain › BACOVA_N 0.66 46.0 4.77e-01 76.8% 79.2%
4984691 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.66 50.0 3.93e-01 82.1% 44.2%
5075859 330.2.1.5 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) › PF29181 0.66 46.0 3.81e-01 75.0% 48.2%
3960733 330.8.1.1 a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like 0.66 46.0 4.09e-01 82.1% 49.4%
3559952 71.2.1.4 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N 0.66 45.0 3.02e-01 76.8% 16.7%
5063417 11.1.1.236 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Mannosidase_ig 0.66 48.0 4.06e-01 78.6% 80.0%
5058021 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.65 45.0 3.80e-01 75.0% 51.4%
5041018 11.1.1.284 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKD_4 0.65 51.0 4.46e-01 85.7% 75.3%
3790399 5.1.5.10 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › ANAPC4_WD40 0.65 47.0 2.76e-01 78.6% 14.1%
3435911 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.65 45.0 3.71e-01 75.0% 41.8%
5010851 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.65 49.0 4.05e-01 82.1% 75.0%
3965263 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.65 43.0 3.97e-01 71.4% 80.0%
3165037 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.65 50.0 3.78e-01 89.3% 34.0%
5025341 330.2.1.0 a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) 0.64 45.0 3.81e-01 75.0% 53.0%
3513352 241.15.1.3 a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 0.64 49.0 4.03e-01 89.3% 59.1%
4040973 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.63 47.0 4.44e-01 80.4% 64.3%
4336488 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.63 46.0 4.36e-01 80.4% 64.3%
5032125 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.63 48.0 3.13e-01 85.7% 18.5%
4981911 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.62 50.0 3.36e-01 92.9% 91.7%
3864513 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 45.0 3.58e-01 80.4% 52.8%
4878713 331.3.1.42 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Mtb12_C 0.62 45.0 3.81e-01 80.4% 83.2%
3718300 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.62 42.0 3.92e-01 73.2% 54.7%
4926997 243.1.1.18 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 0.61 45.0 3.74e-01 80.4% 77.1%
3766736 11.1.1.794 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LIFR_D4 0.61 46.0 3.93e-01 80.4% 74.4%
4945189 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 47.0 4.11e-01 83.9% 77.6%
4827588 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.61 49.0 3.60e-01 92.9% 44.3%
3994956 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 42.0 2.66e-01 71.4% 13.9%
3460917 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.61 49.0 4.21e-01 100.0% 84.8%
4076295 375.1.1.88 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Ogr_Delta 0.61 50.0 5.03e-01 96.4% 96.4%
4926797 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.59 45.0 3.53e-01 85.7% 71.5%
3232360 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 4.09e-01 91.1% 72.6%
1229008 206.1.1.9 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 0.59 41.0 3.62e-01 78.6% 48.8%
3965735 274.1.1.5 a+b two layers › Pili subunits › Pili subunits › Pili subunits › YadA_anchor 0.59 42.0 3.80e-01 78.6% 52.9%
3171938 896.1.1.2 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.59 44.0 3.59e-01 82.1% 76.3%
6391 243.1.1.28 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4440 0.58 48.0 3.80e-01 94.6% 44.6%
3217379 896.1.1.2 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 0.58 43.0 3.68e-01 80.4% 66.3%
3929186 11.1.1.108 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_2 0.58 43.0 3.62e-01 83.9% 76.2%
3606814 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.57 39.0 3.62e-01 73.2% 62.8%
3782417 883.1.1.18 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 0.57 48.0 3.47e-01 100.0% 43.8%
4361190 883.1.1.18 a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › PF26545 0.57 46.0 3.45e-01 100.0% 84.0%
3570615 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 43.0 3.73e-01 92.9% 80.0%
5018204 7520.1.1.0 a/b three-layered sandwiches › CinA-like › CinA-like › CinA-like 0.53 39.0 2.93e-01 82.1% 81.8%
4311344 4252.1.1.13 beta barrels › AttH-like › AttH-like › AttH-like › PF27123 0.51 39.0 3.24e-01 91.1% 71.3%