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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00335

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00335

Identity

Kingdom:
phage

Quality

81.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-68
PDB
Domain cluster: representative
CATH (54)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.85 62.0 6.71e-01 82.0% 90.4%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.84 61.0 5.87e-01 83.6% 68.1%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.82 55.0 6.14e-01 73.8% 91.3%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.82 58.0 6.37e-01 80.3% 93.8%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.81 60.0 5.67e-01 83.6% 65.8%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.80 58.0 6.31e-01 80.3% 92.0%
3h8zA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 53.0 5.90e-01 73.8% 89.6%
4ii1A02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 57.0 5.97e-01 80.3% 83.9%
2ckkA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.78 60.0 6.20e-01 82.0% 93.0%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 64.0 5.63e-01 93.4% 61.1%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 59.0 5.81e-01 85.2% 76.6%
2vb6A01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.76 58.0 6.17e-01 83.6% 92.6%
1y71A00 2.30.30.430 Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain 0.76 59.0 4.83e-01 83.6% 55.0%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 57.0 5.57e-01 82.0% 92.4%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 57.0 5.53e-01 83.6% 73.5%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.74 55.0 5.59e-01 80.3% 81.4%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 56.0 5.36e-01 83.6% 87.5%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.73 57.0 5.24e-01 83.6% 66.2%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 5.47e-01 82.0% 95.3%
2eqmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 55.0 5.83e-01 82.0% 98.1%
1x6bA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 55.0 5.42e-01 82.0% 89.1%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 4.17e-01 82.0% 43.1%
3fb9B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 54.0 4.87e-01 82.0% 70.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 57.0 5.69e-01 96.7% 85.7%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 50.0 5.10e-01 80.3% 76.7%
3ceyB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 4.50e-01 93.4% 42.6%
2l5qA01 2.30.30.730 Mainly Beta › Roll › SH3 type barrels. › 0.70 50.0 5.42e-01 83.6% 94.0%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.68 50.0 3.63e-01 80.3% 29.9%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 58.0 5.02e-01 96.7% 88.5%
5zr6A02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 50.0 4.72e-01 82.0% 86.8%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 50.0 4.86e-01 82.0% 82.1%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.66 50.0 5.03e-01 82.0% 85.0%
3e8lC00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.66 49.0 3.59e-01 82.0% 89.8%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 45.0 3.95e-01 73.8% 65.6%
5ejlA02 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.65 45.0 3.63e-01 73.8% 72.6%
3feoB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 56.0 5.11e-01 98.4% 89.2%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.64 49.0 3.35e-01 82.0% 34.6%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.64 44.0 4.78e-01 80.3% 91.8%
2qmiA02 2.40.128.210 Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain 0.62 43.0 3.72e-01 73.8% 50.0%
2rm4A01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 45.0 4.49e-01 82.0% 87.9%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.61 45.0 3.62e-01 82.0% 39.7%
1u1sA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.61 46.0 4.52e-01 83.6% 78.8%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.60 44.0 3.20e-01 82.0% 83.1%
4ry2A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 44.0 3.48e-01 82.0% 35.5%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 41.0 3.97e-01 73.8% 76.1%
2grgA01 3.40.1840.10 Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like 0.57 38.0 3.50e-01 70.5% 98.8%
2dl5A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.57 45.0 4.21e-01 90.2% 79.5%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.56 40.0 2.56e-01 90.2% 14.4%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.54 46.0 4.54e-01 96.7% 100.0%
5yjwA00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.54 45.0 2.78e-01 100.0% 58.1%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 36.0 3.75e-01 72.1% 77.6%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.52 42.0 3.25e-01 100.0% 79.1%
4kh8A01 2.40.128.540 Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 0.51 42.0 3.21e-01 100.0% 61.4%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.50 41.0 3.50e-01 95.1% 72.9%
ECOD (90)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4321173 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.89 63.0 6.48e-01 82.0% 77.6%
4191690 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.89 60.0 6.22e-01 78.7% 74.1%
4084190 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.87 59.0 6.07e-01 78.7% 72.9%
3299797 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.86 62.0 6.30e-01 82.0% 76.7%
3404936 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.85 60.0 6.57e-01 80.3% 90.0%
3938589 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.85 60.0 6.59e-01 80.3% 90.0%
4844109 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.85 59.0 5.57e-01 78.7% 62.0%
4422251 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.85 56.0 6.12e-01 77.0% 84.0%
3218198 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 60.0 6.28e-01 78.7% 81.8%
3238405 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 63.0 6.63e-01 82.0% 87.3%
4278184 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.84 65.0 5.91e-01 82.0% 73.8%
3878271 101.1.2.284 alpha arrays › HTH › HTH › winged helix domain › WAC_Acf1_DNA_bd 0.84 66.0 4.77e-01 83.6% 32.9%
3622846 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.84 61.0 6.67e-01 82.0% 94.0%
4078260 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.83 66.0 5.69e-01 83.6% 68.9%
3795121 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.83 62.0 6.11e-01 83.6% 73.8%
4196537 4.1.1.52 beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.83 61.0 5.67e-01 77.0% 76.0%
3420348 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.83 60.0 6.28e-01 82.0% 83.6%
3998022 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.83 61.0 6.44e-01 83.6% 85.5%
3037102 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 64.0 6.42e-01 88.5% 80.6%
3326980 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.83 60.0 6.05e-01 82.0% 76.7%
3817476 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 59.0 6.48e-01 82.0% 92.0%
3546607 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 58.0 6.30e-01 80.3% 90.0%
4890270 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 59.0 6.22e-01 80.3% 85.2%
3964733 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 57.0 6.03e-01 82.0% 81.8%
3270324 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 61.0 6.69e-01 80.3% 96.0%
1145920 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.82 60.0 5.34e-01 83.6% 56.6%
4949848 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.81 57.0 5.99e-01 82.0% 81.8%
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 62.0 6.51e-01 80.3% 89.1%
3924377 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 61.0 6.43e-01 80.3% 90.9%
3354387 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.81 63.0 5.53e-01 82.0% 83.5%
171891 4.1.1.110 beta barrels › SH3 › SH3 › SH3 › Tudor_FRX1 0.81 61.0 6.39e-01 83.6% 89.1%
3649741 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.81 58.0 5.38e-01 82.0% 61.3%
3398496 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.80 59.0 6.24e-01 82.0% 87.3%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.80 62.0 5.33e-01 83.6% 78.9%
3795384 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 63.0 4.20e-01 83.6% 23.7%
3217772 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 63.0 5.63e-01 88.5% 61.2%
3625264 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 63.0 5.32e-01 83.6% 53.7%
3451171 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 62.0 6.10e-01 83.6% 80.0%
3932484 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 60.0 5.93e-01 80.3% 89.1%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 65.0 4.31e-01 88.5% 30.2%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 55.0 5.60e-01 75.4% 75.0%
3503291 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.78 64.0 5.22e-01 88.5% 49.1%
3833030 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.78 59.0 4.49e-01 85.2% 36.3%
3550644 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 60.0 6.32e-01 83.6% 90.9%
3619619 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 63.0 6.04e-01 86.9% 80.0%
4242302 4.1.1.249 beta barrels › SH3 › SH3 › SH3 › KOW2_Spt5 0.78 59.0 5.61e-01 80.3% 70.0%
3852545 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 58.0 5.92e-01 83.6% 81.7%
3484822 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.77 60.0 5.48e-01 83.6% 65.0%
3231154 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 63.0 5.70e-01 88.5% 68.8%
4268386 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 59.0 5.66e-01 83.6% 75.7%
3673317 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 55.0 5.77e-01 80.3% 85.5%
3928711 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 62.0 5.52e-01 88.5% 64.7%
4874733 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 58.0 6.08e-01 83.6% 92.6%
3577864 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.76 57.0 5.09e-01 83.6% 57.6%
3922426 4.1.1.363 beta barrels › SH3 › SH3 › SH3 › Agenet, Tudor_FRX1 0.75 64.0 5.03e-01 91.8% 96.7%
5032454 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.75 58.0 4.52e-01 83.6% 42.3%
3996279 4.1.1.34 beta barrels › SH3 › SH3 › SH3 › MBT 0.75 61.0 5.55e-01 88.5% 72.5%
3611989 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 60.0 4.44e-01 86.9% 65.3%
5033600 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 48.0 5.19e-01 72.1% 81.6%
3630782 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.74 67.0 5.01e-01 100.0% 87.6%
3574613 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 64.0 5.37e-01 93.4% 67.0%
3968432 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.74 51.0 4.22e-01 72.1% 77.1%
4027422 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.74 54.0 5.61e-01 82.0% 85.5%
4121981 4.1.1.325 beta barrels › SH3 › SH3 › SH3 › KOW, KOW2_Spt5 0.74 61.0 4.77e-01 90.2% 61.6%
3428486 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.73 63.0 5.74e-01 93.4% 82.5%
None 0.73 65.0 3.48e-01 96.7% 51.1%
3387378 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.72 55.0 4.92e-01 82.0% 71.8%
3620554 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 56.0 4.80e-01 83.6% 61.1%
3775592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.72 63.0 3.35e-01 96.7% 42.8%
4932493 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 54.0 5.34e-01 82.0% 76.9%
4418620 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 62.0 3.35e-01 96.7% 64.3%
3903213 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.71 60.0 4.29e-01 93.4% 38.3%
4147366 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.71 51.0 5.50e-01 82.0% 97.9%
4018596 4.1.1.320 beta barrels › SH3 › SH3 › SH3 › SH3_CYT4 0.71 51.0 4.33e-01 82.0% 47.0%
4555816 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 4.78e-01 82.0% 68.2%
3969959 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 53.0 4.67e-01 82.0% 75.6%
3404643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 51.0 4.92e-01 78.7% 71.4%
4927654 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 52.0 5.15e-01 82.0% 83.1%
4929472 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 52.0 4.80e-01 82.0% 73.8%
4368811 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.69 50.0 5.20e-01 82.0% 85.5%
4293453 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 50.0 4.66e-01 82.0% 67.5%
5025364 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.67 50.0 4.73e-01 82.0% 68.0%
4147290 4.1.1.364 beta barrels › SH3 › SH3 › SH3 › GatD_N 0.66 45.0 4.44e-01 82.0% 67.7%
4044896 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 49.0 4.64e-01 82.0% 66.7%
5080336 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 48.0 4.82e-01 82.0% 82.8%
5018157 4.1.1.485 beta barrels › SH3 › SH3 › SH3 › DUF6897 0.64 46.0 4.70e-01 78.7% 80.0%
3963455 219.1.1.18 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39 0.64 50.0 3.83e-01 91.8% 36.6%
3363360 4.1.1.141 beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor 0.64 47.0 4.32e-01 83.6% 58.8%
3702416 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 45.0 3.87e-01 82.0% 67.0%
3782826 4.1.1.39 beta barrels › SH3 › SH3 › SH3 › SHD1 0.54 45.0 4.30e-01 100.0% 98.7%