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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00363

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00363

Identity

Kingdom:
phage

Quality

90.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-80
PDB
Domain cluster: representative
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fdjA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.73 51.0 4.24e-01 72.4% 99.2%
6cngA03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.70 48.0 4.06e-01 72.4% 99.2%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.69 47.0 3.76e-01 72.4% 36.7%
3sreA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.68 56.0 3.66e-01 90.8% 84.8%
3sc7X01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 50.0 3.24e-01 78.9% 68.2%
2fs2B00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 47.0 3.86e-01 73.7% 89.1%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.66 51.0 4.28e-01 85.5% 47.9%
2aehA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 46.0 4.06e-01 72.4% 50.5%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.65 44.0 3.49e-01 71.1% 92.6%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.65 50.0 3.22e-01 82.9% 75.2%
2xp1A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.65 55.0 5.08e-01 92.1% 87.4%
3n7cA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.65 46.0 4.15e-01 76.3% 81.5%
2giaA00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.64 48.0 3.81e-01 78.9% 74.7%
4gakA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.64 44.0 3.05e-01 72.4% 72.4%
2fwvA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.64 44.0 3.33e-01 72.4% 43.2%
7jvhC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 47.0 3.07e-01 78.9% 45.0%
4tyzA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 42.0 3.71e-01 72.4% 46.8%
6j9eJ00 3.30.160.560 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 45.0 4.84e-01 76.3% 93.9%
2eenA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.63 46.0 3.56e-01 78.9% 52.0%
1vkdA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 50.0 3.34e-01 89.5% 83.4%
2acaA00 2.40.320.10 Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 0.61 45.0 3.49e-01 78.9% 50.6%
3brcA02 3.40.50.10150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit 0.61 51.0 4.40e-01 93.4% 94.2%
4ffgA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.60 47.0 3.09e-01 85.5% 23.0%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 48.0 3.12e-01 88.2% 82.3%
4n4iA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 3.81e-01 71.1% 92.2%
2p12A01 2.40.380.10 Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like 0.58 45.0 3.65e-01 86.8% 77.0%
3tw8A01 3.30.450.200 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Longin module 0.58 42.0 3.42e-01 75.0% 43.5%
3qwmA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.86e-01 85.5% 78.7%
4esqA00 3.40.1000.70 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › PknH-like extracellular domain 0.57 46.0 3.48e-01 89.5% 42.3%
1u17A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 45.0 3.42e-01 85.5% 67.6%
1ujcA00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.57 40.0 3.23e-01 75.0% 96.8%
2glxA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.57 40.0 2.94e-01 73.7% 74.4%
3bdrA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.57 41.0 3.28e-01 76.3% 82.1%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 43.0 3.81e-01 82.9% 97.4%
2ml5A00 3.10.450.410 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 40.0 3.22e-01 75.0% 82.6%
3holA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.56 46.0 3.61e-01 90.8% 90.4%
6muwH00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 47.0 3.60e-01 97.4% 79.1%
4ge6A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 48.0 3.28e-01 100.0% 65.0%
6muwK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.56 48.0 3.61e-01 97.4% 82.1%
5h9kA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 46.0 3.76e-01 97.4% 87.0%
7szeB01 2.102.10.10 Mainly Beta › 3-layer Sandwich › Rieske Iron-sulfur Protein › Rieske [2Fe-2S] iron-sulphur domain 0.55 41.0 3.70e-01 80.3% 100.0%
2h3gX02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 39.0 3.13e-01 76.3% 56.6%
2cm4A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.54 45.0 3.76e-01 97.4% 89.7%
1y9lA00 2.40.128.230 Mainly Beta › Beta Barrel › Lipocalin › Pilot protein MxiM 0.54 40.0 3.65e-01 82.9% 93.6%
3jr7A03 3.30.1180.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › 0.53 42.0 3.66e-01 96.1% 55.3%
4an6B00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.52 44.0 3.51e-01 100.0% 87.1%
4i8oA01 3.30.310.240 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain 0.52 40.0 3.90e-01 88.2% 87.6%
3dpuB03 3.30.310.200 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.52 39.0 3.48e-01 80.3% 61.1%
2m38A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 42.0 3.53e-01 90.8% 81.5%
4k35A02 2.70.98.30 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 0.52 43.0 3.27e-01 97.4% 88.2%
1tolA01 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.51 36.0 3.51e-01 72.4% 73.2%
3lhnA00 2.40.128.640 Mainly Beta › Beta Barrel › Lipocalin › 0.51 40.0 3.66e-01 89.5% 83.2%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 36.0 3.84e-01 77.6% 86.6%
3v8uA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.51 41.0 3.24e-01 93.4% 93.9%
3pquA02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.50 41.0 3.25e-01 94.7% 89.8%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4594780 5.1.4.307 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF29630 0.76 55.0 3.49e-01 76.3% 40.0%
1937091 301.13.1.1 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.74 50.0 4.23e-01 71.1% 100.0%
4259027 9.3.1.3 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Eryth_link_C 0.73 51.0 4.38e-01 73.7% 97.6%
3659855 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 51.0 5.00e-01 72.4% 93.8%
3617341 5.1.4.320 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 0.72 51.0 3.15e-01 73.7% 31.5%
3179577 220.1.1.16 beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF1681 0.70 49.0 3.89e-01 73.7% 75.5%
3216382 220.1.1.61 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 0.70 48.0 4.21e-01 72.4% 48.7%
3785687 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.69 49.0 4.32e-01 75.0% 51.3%
3767813 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.69 48.0 3.17e-01 72.4% 94.3%
3620049 5.1.4.220 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR35_2nd 0.69 57.0 3.80e-01 90.8% 67.2%
3744781 109.4.1.69 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IKI3 0.69 50.0 3.34e-01 77.6% 71.7%
3212968 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.68 47.0 3.87e-01 75.0% 40.0%
3412142 252.1.1.1 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD › MBD 0.68 54.0 4.54e-01 82.9% 71.7%
3929881 220.1.1.61 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C_FAK1 0.68 47.0 4.11e-01 72.4% 48.7%
3591463 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.68 47.0 4.13e-01 73.7% 48.7%
3514476 220.1.1.27 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.67 47.0 3.57e-01 72.4% 32.0%
3912274 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.66 41.0 4.31e-01 93.4% 68.6%
3225189 5.1.4.369 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N 0.66 54.0 3.06e-01 89.5% 19.3%
3570527 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 46.0 3.82e-01 73.7% 42.3%
4982498 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 55.0 3.25e-01 92.1% 88.5%
3282412 4312.1.1.4 a+b two layers › RelE-like › RelE-like › RelE-like › Gp49 0.65 49.0 4.19e-01 80.3% 56.1%
3266531 234.3.1.0 a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain 0.65 45.0 3.54e-01 76.3% 33.3%
4018977 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 47.0 3.99e-01 76.3% 65.6%
3589473 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.65 43.0 4.26e-01 71.1% 65.0%
5794 295.1.1.7 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › MRP 0.64 48.0 3.81e-01 78.9% 74.7%
3806012 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.64 53.0 3.47e-01 90.8% 26.4%
4528984 222.1.1.38 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase › PS-DH, PKS_DH_N 0.64 52.0 3.43e-01 86.8% 64.3%
3422528 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 43.0 4.74e-01 72.4% 88.3%
3617987 4099.1.1.28 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › PF29108 0.64 54.0 5.23e-01 96.1% 94.1%
3463561 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 51.0 3.25e-01 88.2% 94.9%
3836701 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.63 43.0 3.50e-01 71.1% 37.8%
3882163 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.63 39.0 2.67e-01 73.7% 18.4%
3811166 5.1.3.118 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 48.0 3.25e-01 82.9% 48.2%
3928054 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 48.0 3.30e-01 82.9% 54.0%
3812869 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.62 48.0 4.49e-01 86.8% 81.0%
3570692 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.62 44.0 3.83e-01 75.0% 48.7%
3483205 220.1.1.58 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH-GRAM_MTMR6-like 0.61 43.0 3.70e-01 75.0% 44.8%
3540014 243.1.1.40 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NXF_NTF2 0.61 50.0 4.19e-01 89.5% 96.9%
3831169 5.1.5.66 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.61 48.0 3.31e-01 86.8% 59.3%
3258838 220.1.1.66 beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.60 41.0 3.29e-01 75.0% 36.0%
4021124 5.1.5.88 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Nucleoporin_N 0.60 50.0 3.03e-01 93.4% 42.3%
3564821 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.59 44.0 3.55e-01 80.3% 67.7%
5009633 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 42.0 4.00e-01 75.0% 80.0%
3215377 5.1.4.62 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PROPPIN 0.58 50.0 3.30e-01 100.0% 40.0%
3439990 220.1.1.76 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_2 0.58 38.0 3.66e-01 76.3% 56.7%
4001894 207.1.1.24 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_8 0.57 50.0 2.89e-01 100.0% 31.5%
4946835 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.57 46.0 3.05e-01 92.1% 20.3%
4028484 7.1.1.7 beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ_3 0.57 46.0 3.78e-01 89.5% 83.4%
3868838 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 45.0 3.60e-01 88.2% 68.1%
3270393 2003.1.5.28 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase 0.56 48.0 3.31e-01 97.4% 29.8%
3397074 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.56 45.0 3.85e-01 92.1% 72.6%
3427945 284.1.3.0 a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain 0.56 45.0 4.19e-01 90.8% 84.0%
3508714 295.1.1.29 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.56 38.0 3.12e-01 73.7% 68.1%
3225336 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.55 46.0 3.73e-01 90.8% 85.5%
3589392 301.13.1.1 a+b three layers › Bacillus chorismate mutase-like › DAK1/DegV C-terminal domain › DAK1/DegV C-terminal domain › DegV 0.55 45.0 3.81e-01 96.1% 53.1%
4995784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 37.0 3.81e-01 73.7% 70.7%
3737837 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 4.52e-01 92.1% 100.0%
5007818 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.54 47.0 3.35e-01 100.0% 72.2%
3823026 304.8.1.89 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › GUB_WAK_bind 0.54 41.0 3.14e-01 82.9% 92.8%
3706310 331.19.1.0 a+b two layers › TBP-like › Toxin RnlA N-terminal domains › Toxin RnlA N-terminal domains 0.53 42.0 3.78e-01 85.5% 86.7%
3615163 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 40.0 3.59e-01 82.9% 74.8%
3276895 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 43.0 2.73e-01 92.1% 23.5%
3509036 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 33.0 2.87e-01 89.5% 40.8%