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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00493
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00493
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-59
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF17653.7 best | DUF5522 | 39.8 | 5.70e-10 | 96.0% | 89.6% |
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3h5xA04 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.62 | 50.0 | 4.16e-01 | 94.0% | 90.5% |
| 4o2zA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 47.0 | 3.50e-01 | 96.0% | 73.2% |
| 4igbB02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 49.0 | 3.57e-01 | 98.0% | 46.9% |
| 7bkea01 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 38.0 | 3.43e-01 | 70.0% | 63.5% |
| 3mdmA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 44.0 | 2.64e-01 | 90.0% | 84.4% |
| 3w6kC00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 39.0 | 3.41e-01 | 74.0% | 44.8% |
| 3sooA01 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.57 | 34.0 | 3.13e-01 | 98.0% | 42.0% |
| 1ub4C00 | 2.10.260.10 | Mainly Beta › Ribbon › Pemi-like Protein 1; Chain: D › | 0.57 | 36.0 | 3.28e-01 | 70.0% | 42.7% |
| 2edgA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 43.0 | 3.31e-01 | 90.0% | 68.5% |
| 4gu4A01 | 2.10.25.20 | Mainly Beta › Ribbon › Laminin › reovirus attachment protein sigma1; domain 1 | 0.55 | 37.0 | 3.98e-01 | 80.0% | 81.4% |
| 2r8rA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 45.0 | 3.04e-01 | 96.0% | 44.0% |
| 4iduB01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.55 | 44.0 | 3.37e-01 | 92.0% | 36.2% |
| 3zlaD01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.55 | 42.0 | 3.24e-01 | 90.0% | 34.9% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.55 | 39.0 | 2.40e-01 | 84.0% | 83.4% |
| 6n59A02 | 3.30.70.20 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 36.0 | 3.16e-01 | 70.0% | 64.3% |
| 1s3lA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 41.0 | 3.00e-01 | 90.0% | 49.7% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.54 | 40.0 | 2.99e-01 | 94.0% | 30.6% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.53 | 34.0 | 2.75e-01 | 92.0% | 30.2% |
| 1sbxA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.53 | 38.0 | 3.19e-01 | 84.0% | 66.0% |
| 1knvB00 | 3.40.91.10 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.53 | 42.0 | 2.65e-01 | 90.0% | 25.4% |
| 3ossC00 | 2.30.30.830 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 35.0 | 3.24e-01 | 80.0% | 52.3% |
| 7nmqA01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.53 | 44.0 | 2.69e-01 | 98.0% | 16.9% |
| 4i98C01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 34.0 | 3.01e-01 | 84.0% | 42.7% |
| 4bgpA01 | 1.20.142.20 | Mainly Alpha › Up-down Bundle › Poly(ADP-ribose) Polymerase; domain 1 › | 0.53 | 41.0 | 3.21e-01 | 92.0% | 36.2% |
| 3nffH00 | 6.20.250.70 | Special › Other non-globular › Double Stranded RNA Binding Domain › | 0.52 | 36.0 | 2.81e-01 | 74.0% | 51.4% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 30.0 | 2.78e-01 | 76.0% | 35.3% |
| 3k1hA00 | 3.30.1120.180 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Flagellar FLiS export co-chaperone, HP1076 | 0.52 | 41.0 | 3.24e-01 | 92.0% | 93.9% |
| 1tedA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.52 | 43.0 | 3.22e-01 | 100.0% | 61.1% |
| 4w1vA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 42.0 | 3.03e-01 | 94.0% | 79.1% |
| 2z1cB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 36.0 | 3.23e-01 | 76.0% | 52.7% |
| 2fclA00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.51 | 42.0 | 3.10e-01 | 100.0% | 51.3% |
| 8gsxA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 36.0 | 2.73e-01 | 82.0% | 96.7% |
| 4jpbW02 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.51 | 41.0 | 3.56e-01 | 92.0% | 69.6% |
| 4wh5A00 | 3.30.460.40 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.50 | 42.0 | 3.06e-01 | 100.0% | 34.2% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.50 | 38.0 | 2.87e-01 | 84.0% | 46.1% |
| 1u6gC00 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.50 | 41.0 | 2.25e-01 | 100.0% | 11.0% |
| 2qdlA02 | 2.40.50.180 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 | 0.50 | 40.0 | 3.48e-01 | 92.0% | 67.5% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028075 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.67 | 43.0 | 4.30e-01 | 76.0% | 64.0% |
| 3604643 | 2004.1.1.46 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MCM | 0.66 | 45.0 | 2.86e-01 | 100.0% | 13.6% |
| 3430270 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.66 | 36.0 | 3.13e-01 | 82.0% | 34.7% |
| 4971049 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.64 | 43.0 | 3.80e-01 | 72.0% | 91.3% |
| 1147677 | 4967.1.1.2 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › RdRP_1 | 0.63 | 51.0 | 4.36e-01 | 94.0% | 85.1% |
| 4558880 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.63 | 50.0 | 2.98e-01 | 90.0% | 47.4% |
| 4418033 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.62 | 51.0 | 3.03e-01 | 94.0% | 47.8% |
| 3464207 | 377.2.1.4 ↗ | few secondary structure elements › Glucocorticoid receptor-like › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › C-terminal, Zn-finger domain of MutM-like DNA repair proteins › Fpg-like_C | 0.61 | 34.0 | 3.78e-01 | 86.0% | 67.5% |
| 3968615 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.61 | 42.0 | 2.96e-01 | 72.0% | 60.6% |
| 3270036 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.60 | 32.0 | 3.16e-01 | 82.0% | 38.2% |
| 4945879 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.60 | 47.0 | 2.80e-01 | 92.0% | 48.0% |
| 4949051 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.59 | 42.0 | 3.16e-01 | 78.0% | 73.7% |
| 3488042 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.59 | 41.0 | 2.48e-01 | 76.0% | 48.9% |
| 4269335 | 7542.1.1.1 ↗ | a/b three-layered sandwiches › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase iron-sulfur domain › Aconitase | 0.58 | 44.0 | 2.88e-01 | 88.0% | 85.9% |
| 3990730 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.58 | 47.0 | 2.77e-01 | 96.0% | 91.1% |
| 3967460 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.57 | 42.0 | 3.03e-01 | 78.0% | 70.5% |
| 4661427 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.57 | 40.0 | 2.97e-01 | 78.0% | 71.0% |
| 3813779 | 7015.1.1.1 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › DHHC | 0.57 | 46.0 | 2.87e-01 | 90.0% | 20.7% |
| 3908644 | 300.1.1.11 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › PLDc_3 | 0.55 | 42.0 | 2.87e-01 | 92.0% | 80.4% |
| 4142311 | 109.4.1.1297 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TIMELESS, PF27570 | 0.55 | 37.0 | 2.11e-01 | 70.0% | 14.4% |
| 4012079 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.55 | 42.0 | 2.48e-01 | 90.0% | 88.7% |
| 3224333 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.55 | 37.0 | 2.30e-01 | 72.0% | 50.1% |
| 3816855 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 44.0 | 3.40e-01 | 96.0% | 74.4% |
| 3965555 | 10.12.1.40 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › JmjC_2 | 0.54 | 46.0 | 2.91e-01 | 100.0% | 40.0% |
| 4057956 | 2004.1.1.35 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Bac_DnaA | 0.54 | 42.0 | 2.86e-01 | 96.0% | 61.3% |
| 5078709 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.53 | 36.0 | 2.99e-01 | 74.0% | 69.1% |
| 3992357 | 2.1.1.11 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a | 0.53 | 39.0 | 2.95e-01 | 78.0% | 45.2% |
| 4000205 | 384.1.1.0 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like | 0.53 | 34.0 | 3.45e-01 | 92.0% | 66.0% |
| 5050499 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.52 | 36.0 | 3.13e-01 | 84.0% | 43.5% |
| 5033726 | 101.1.2.55 ↗ | alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB | 0.52 | 35.0 | 3.04e-01 | 76.0% | 71.0% |
| 5005237 | 4967.1.1.11 ↗ | alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › GIIM | 0.52 | 40.0 | 2.86e-01 | 86.0% | 46.3% |
| 1275822 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.52 | 40.0 | 3.64e-01 | 86.0% | 77.1% |
| 3281192 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.52 | 44.0 | 3.08e-01 | 100.0% | 61.6% |
| 3385336 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.51 | 41.0 | 2.56e-01 | 90.0% | 19.0% |
| 3927365 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 41.0 | 2.74e-01 | 96.0% | 69.8% |
| 3967712 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.51 | 41.0 | 3.03e-01 | 92.0% | 71.0% |
| 4886291 | 2.1.1.14 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RuvA_N | 0.51 | 36.0 | 3.35e-01 | 76.0% | 83.1% |
| 4928713 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.51 | 41.0 | 3.01e-01 | 92.0% | 66.2% |
| 4964711 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.51 | 41.0 | 3.06e-01 | 92.0% | 71.1% |
| 5016331 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.51 | 41.0 | 3.01e-01 | 92.0% | 70.7% |
| 3971152 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.51 | 40.0 | 2.97e-01 | 90.0% | 38.6% |
| 5068785 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.50 | 32.0 | 3.44e-01 | 98.0% | 77.5% |
| 4132943 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.50 | 37.0 | 3.58e-01 | 78.0% | 81.8% |
| 3793758 | 394.1.1.1 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 | 0.50 | 32.0 | 3.22e-01 | 76.0% | 65.3% |