←Back to structures
Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00528
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00528
Identity
- Kingdom:
- phage
Quality
75.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 114-174
Domain cluster:
representative
CATH (55)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yxzA02 | 3.90.650.10 | Alpha Beta › Alpha-Beta Complex › Phosphoribosyl-aminoimidazole Synthetase; Chain A, domain 2 › PurM-like C-terminal domain | 0.72 | 59.0 | 4.41e-01 | 93.4% | 90.7% |
| 3k59A02 | 3.30.70.2250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif | 0.71 | 54.0 | 5.33e-01 | 85.2% | 100.0% |
| 1ayeA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.70 | 59.0 | 5.01e-01 | 91.8% | 73.7% |
| 3d68A01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.70 | 58.0 | 5.02e-01 | 90.2% | 78.3% |
| 1jqgA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.70 | 59.0 | 5.17e-01 | 93.4% | 80.2% |
| 1xtzA02 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.70 | 53.0 | 4.85e-01 | 85.2% | 95.2% |
| 1kwmA01 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.69 | 56.0 | 4.96e-01 | 90.2% | 83.0% |
| 2vd3A03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 53.0 | 5.03e-01 | 86.9% | 85.1% |
| 2yx1A01 | 3.30.70.2580 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.67 | 55.0 | 5.42e-01 | 93.4% | 97.0% |
| 1r6vA02 | 3.30.70.80 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 | 0.67 | 52.0 | 4.89e-01 | 88.5% | 85.9% |
| 2djwA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.67 | 51.0 | 4.85e-01 | 86.9% | 95.9% |
| 2vz8A03 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.66 | 58.0 | 3.65e-01 | 100.0% | 61.0% |
| 2v8pA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.66 | 53.0 | 4.40e-01 | 91.8% | 98.3% |
| 2jsxA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 50.0 | 4.80e-01 | 85.2% | 97.2% |
| 2zbcA01 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.65 | 52.0 | 4.94e-01 | 90.2% | 98.6% |
| 6fijA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.65 | 57.0 | 3.60e-01 | 100.0% | 39.6% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.65 | 53.0 | 5.17e-01 | 91.8% | 95.5% |
| 3tzyA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.65 | 52.0 | 5.02e-01 | 91.8% | 97.1% |
| 2cyyA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.64 | 48.0 | 4.30e-01 | 85.2% | 72.6% |
| 1eayD00 | 3.30.70.400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › CheY-binding domain of CheA | 0.64 | 51.0 | 4.97e-01 | 91.8% | 100.0% |
| 2hg4D03 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.64 | 55.0 | 3.56e-01 | 100.0% | 41.4% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.64 | 48.0 | 4.47e-01 | 83.6% | 89.9% |
| 3jcmH04 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.64 | 50.0 | 4.72e-01 | 90.2% | 97.4% |
| 1yj7B01 | 3.30.70.1530 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hypothetical protein rpa1041 | 0.62 | 47.0 | 4.56e-01 | 83.6% | 84.5% |
| 1qupA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 48.0 | 4.66e-01 | 88.5% | 94.3% |
| 3e8oB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 49.0 | 4.26e-01 | 90.2% | 88.0% |
| 2y1rK00 | 3.30.70.1950 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 4.56e-01 | 100.0% | 83.7% |
| 4mt1A07 | 3.30.70.1440 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain | 0.61 | 46.0 | 4.07e-01 | 88.5% | 88.2% |
| 1ixkA01 | 3.30.70.1170 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sun protein; domain 3 | 0.61 | 49.0 | 4.25e-01 | 95.1% | 62.9% |
| 7veeA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.61 | 52.0 | 3.32e-01 | 100.0% | 38.8% |
| 2kdoA03 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 50.0 | 4.72e-01 | 100.0% | 95.0% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 45.0 | 4.26e-01 | 86.9% | 98.8% |
| 2od4B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 47.0 | 4.22e-01 | 90.2% | 100.0% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 46.0 | 4.11e-01 | 91.8% | 92.7% |
| 1vq8E01 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.59 | 43.0 | 4.04e-01 | 80.3% | 98.7% |
| 7rd0A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.59 | 49.0 | 3.76e-01 | 98.4% | 59.4% |
| 2crlA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 47.0 | 4.59e-01 | 91.8% | 98.6% |
| 1mwyA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 47.0 | 4.50e-01 | 91.8% | 95.9% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 46.0 | 4.07e-01 | 90.2% | 93.6% |
| 3n89A02 | 3.30.310.210 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 45.0 | 3.60e-01 | 90.2% | 86.1% |
| 3hzeA00 | 3.30.70.1860 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Uncharacterised protein family Ycf54 | 0.57 | 46.0 | 4.06e-01 | 100.0% | 96.3% |
| 1cc8A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 42.0 | 4.14e-01 | 90.2% | 98.6% |
| 2aj0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 43.0 | 4.19e-01 | 90.2% | 97.2% |
| 1fvqA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.55 | 43.0 | 4.21e-01 | 93.4% | 100.0% |
| 3ciaA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.55 | 42.0 | 3.13e-01 | 88.5% | 53.8% |
| 1httA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.55 | 38.0 | 2.53e-01 | 72.1% | 74.5% |
| 1arbA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 39.0 | 3.18e-01 | 82.0% | 97.8% |
| 3i8bA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 42.0 | 3.02e-01 | 95.1% | 76.0% |
| 2mklC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.44e-01 | 83.6% | 76.2% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 39.0 | 3.26e-01 | 83.6% | 66.9% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.52 | 40.0 | 3.28e-01 | 88.5% | 92.0% |
| 2dm2A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 38.0 | 3.28e-01 | 83.6% | 67.3% |
| 5iaiA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 37.0 | 2.80e-01 | 83.6% | 78.6% |
| 1hcfX00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.36e-01 | 85.2% | 78.2% |
| 7y6oA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.48e-01 | 86.9% | 82.0% |
ECOD (80)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4202472 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.72 | 60.0 | 5.77e-01 | 91.8% | 95.7% |
| 3404332 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.72 | 60.0 | 5.28e-01 | 91.8% | 76.7% |
| 3389383 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.72 | 60.0 | 5.48e-01 | 91.8% | 90.0% |
| 5078772 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.72 | 58.0 | 5.75e-01 | 91.8% | 100.0% |
| 4227831 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.72 | 59.0 | 5.68e-01 | 91.8% | 91.4% |
| 3403404 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.71 | 59.0 | 5.43e-01 | 91.8% | 88.7% |
| 4037378 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.71 | 59.0 | 5.78e-01 | 91.8% | 98.5% |
| 3286151 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.70 | 58.0 | 5.73e-01 | 91.8% | 93.8% |
| 4227906 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.70 | 58.0 | 5.58e-01 | 91.8% | 95.7% |
| 3794588 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.70 | 59.0 | 5.05e-01 | 91.8% | 76.8% |
| 3624999 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.70 | 58.0 | 5.07e-01 | 91.8% | 81.1% |
| 3897392 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.70 | 58.0 | 5.10e-01 | 91.8% | 82.2% |
| 3390198 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.69 | 58.0 | 5.22e-01 | 93.4% | 85.9% |
| 4682714 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.69 | 55.0 | 5.37e-01 | 91.8% | 98.6% |
| 3959690 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.69 | 56.0 | 5.08e-01 | 91.8% | 78.8% |
| 3394715 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.69 | 58.0 | 5.19e-01 | 93.4% | 84.7% |
| 3287267 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.68 | 56.0 | 5.38e-01 | 91.8% | 92.9% |
| 4288649 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.68 | 56.0 | 5.38e-01 | 91.8% | 97.1% |
| 3248903 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.68 | 56.0 | 5.50e-01 | 91.8% | 98.5% |
| 5075438 | 304.4.1.29 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg_3 | 0.68 | 52.0 | 4.77e-01 | 86.9% | 82.4% |
| 5006888 | 304.22.1.2 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › PF26257 | 0.68 | 54.0 | 5.21e-01 | 88.5% | 92.9% |
| 4310314 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.67 | 53.0 | 5.59e-01 | 86.9% | 100.0% |
| 3287755 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.67 | 55.0 | 5.59e-01 | 91.8% | 98.3% |
| 4202608 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.67 | 55.0 | 5.29e-01 | 91.8% | 95.7% |
| 4554827 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.67 | 54.0 | 5.25e-01 | 91.8% | 92.9% |
| 2507455 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.67 | 54.0 | 5.22e-01 | 91.8% | 98.6% |
| 4141737 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.67 | 54.0 | 5.02e-01 | 91.8% | 92.5% |
| 5011762 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 50.0 | 5.12e-01 | 85.2% | 96.7% |
| 2870852 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.66 | 54.0 | 4.90e-01 | 91.8% | 85.7% |
| 3709912 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.66 | 52.0 | 4.79e-01 | 86.9% | 85.0% |
| 4633599 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.66 | 53.0 | 5.13e-01 | 91.8% | 97.1% |
| 3395435 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.66 | 54.0 | 5.30e-01 | 91.8% | 93.8% |
| 3165154 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.66 | 51.0 | 4.77e-01 | 88.5% | 81.2% |
| 1920459 | 2007.1.19.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › FabD/lysophospholipase-like › Acyl_transf_1 | 0.66 | 57.0 | 3.54e-01 | 100.0% | 37.9% |
| 5039893 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.65 | 53.0 | 5.00e-01 | 90.2% | 85.3% |
| 3257902 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.65 | 52.0 | 4.66e-01 | 91.8% | 97.8% |
| 4023453 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.64 | 52.0 | 5.00e-01 | 90.2% | 100.0% |
| 3958402 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.64 | 57.0 | 4.27e-01 | 100.0% | 80.7% |
| 3286231 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.64 | 51.0 | 4.86e-01 | 91.8% | 84.0% |
| 1082801 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.64 | 52.0 | 5.10e-01 | 91.8% | 95.4% |
| 5148 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.63 | 51.0 | 4.86e-01 | 91.8% | 97.2% |
| 4965210 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.63 | 51.0 | 5.13e-01 | 90.2% | 91.7% |
| 5014609 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.63 | 51.0 | 5.01e-01 | 90.2% | 93.8% |
| 5025450 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.63 | 49.0 | 4.83e-01 | 88.5% | 100.0% |
| 4018509 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.63 | 53.0 | 5.00e-01 | 96.7% | 93.3% |
| 4403870 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.62 | 45.0 | 3.88e-01 | 77.0% | 60.0% |
| 3657793 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.62 | 48.0 | 4.75e-01 | 88.5% | 100.0% |
| 5010612 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 55.0 | 4.40e-01 | 100.0% | 55.8% |
| 4576277 | 304.22.1.1 ↗ | a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C | 0.62 | 53.0 | 5.14e-01 | 100.0% | 94.3% |
| 3310843 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.62 | 49.0 | 4.60e-01 | 91.8% | 86.3% |
| 3447217 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.62 | 49.0 | 4.62e-01 | 90.2% | 89.3% |
| 3457319 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.61 | 50.0 | 4.77e-01 | 95.1% | 92.0% |
| 3807180 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.61 | 48.0 | 4.55e-01 | 90.2% | 89.3% |
| 3265392 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.61 | 48.0 | 4.60e-01 | 93.4% | 97.3% |
| 4950570 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.61 | 49.0 | 4.85e-01 | 93.4% | 98.5% |
| 3343188 | 304.5.1.0 ↗ | a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like | 0.60 | 48.0 | 3.83e-01 | 93.4% | 51.4% |
| 4943247 | 4955.1.1.12 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › RNA_pol_Rpb1_5 | 0.60 | 41.0 | 3.72e-01 | 73.8% | 62.2% |
| 3644246 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.60 | 46.0 | 4.32e-01 | 88.5% | 98.8% |
| 4265078 | 304.14.1.0 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) | 0.60 | 47.0 | 4.46e-01 | 90.2% | 94.7% |
| 3674421 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.60 | 48.0 | 4.63e-01 | 91.8% | 95.7% |
| 3293450 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.60 | 47.0 | 4.57e-01 | 91.8% | 97.1% |
| 3322344 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.59 | 46.0 | 4.79e-01 | 91.8% | 94.5% |
| 3309725 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.59 | 47.0 | 4.57e-01 | 91.8% | 98.6% |
| 5011939 | 304.6.1.0 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain | 0.58 | 48.0 | 3.94e-01 | 100.0% | 76.9% |
| 4947796 | 309.1.2.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 | 0.58 | 47.0 | 3.50e-01 | 93.4% | 56.0% |
| 4643895 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 46.0 | 4.49e-01 | 93.4% | 97.1% |
| 3421728 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 45.0 | 3.92e-01 | 86.9% | 89.5% |
| 3807078 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.57 | 44.0 | 4.20e-01 | 91.8% | 94.7% |
| 3661782 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.57 | 46.0 | 4.12e-01 | 93.4% | 76.7% |
| 5022659 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 41.0 | 3.89e-01 | 80.3% | 88.0% |
| 3621043 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.56 | 40.0 | 3.56e-01 | 80.3% | 71.7% |
| 4963958 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.56 | 43.0 | 2.94e-01 | 88.5% | 29.6% |
| 4949196 | 304.117.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in YebC › Ferredoxin-like domain in YebC | 0.56 | 43.0 | 4.38e-01 | 88.5% | 95.0% |
| 4958990 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.56 | 41.0 | 4.13e-01 | 86.9% | 100.0% |
| 3671162 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.55 | 44.0 | 4.48e-01 | 91.8% | 95.0% |
| 3282317 | 304.3.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA | 0.54 | 40.0 | 4.03e-01 | 85.2% | 100.0% |
| 3400735 | 379.1.1.3 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 | 0.53 | 36.0 | 3.73e-01 | 96.7% | 80.0% |
| 3314191 | 314.1.1.9 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_His | 0.52 | 35.0 | 2.30e-01 | 73.8% | 80.0% |
| 3790599 | 389.1.1.0 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin | 0.51 | 37.0 | 3.46e-01 | 82.0% | 85.9% |
| 2033701 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.50 | 38.0 | 2.69e-01 | 88.5% | 57.3% |
D2
medium
residues 53-102
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gpeD01 | 1.10.1220.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like | 0.85 | 57.0 | 6.25e-01 | 70.0% | 89.7% |
| 1eyvB00 | 1.10.940.10 | Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like | 0.72 | 47.0 | 3.46e-01 | 70.0% | 25.6% |
| 2vl7A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 55.0 | 3.77e-01 | 92.0% | 41.0% |
| 4hjhA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.62 | 44.0 | 3.41e-01 | 76.0% | 88.7% |
| 7ymiD01 | 1.20.85.10 | Mainly Alpha › Up-down Bundle › Photosynthetic Reaction Center, subunit M; domain 1 › Photosystem II protein D1-like | 0.60 | 41.0 | 2.77e-01 | 70.0% | 58.3% |
| 3f1yA00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.57 | 47.0 | 3.00e-01 | 100.0% | 71.1% |
| 2w7nA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.51 | 42.0 | 3.57e-01 | 100.0% | 90.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2771700 | 101.1.11.11 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1778 | 0.89 | 62.0 | 5.00e-01 | 72.0% | 41.4% |
| 5011906 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.82 | 55.0 | 5.37e-01 | 76.0% | 63.6% |
| 2455631 | 101.1.11.11 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › DUF1778 | 0.82 | 56.0 | 4.70e-01 | 72.0% | 43.4% |
| 3955892 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.80 | 54.0 | 5.42e-01 | 70.0% | 70.0% |
| 5021371 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.80 | 54.0 | 3.69e-01 | 72.0% | 20.6% |
| 3941449 | 101.1.11.42 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › ParD_like | 0.79 | 54.0 | 4.84e-01 | 72.0% | 51.4% |
| 3286839 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.78 | 54.0 | 4.90e-01 | 74.0% | 52.9% |
| 5022880 | 101.1.11.2 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › RHH_1 | 0.78 | 53.0 | 4.78e-01 | 72.0% | 54.3% |
| 3284512 | 101.1.11.30 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › FitA-like_RHH | 0.77 | 52.0 | 4.65e-01 | 70.0% | 50.0% |
| 2625223 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.76 | 53.0 | 5.22e-01 | 76.0% | 67.3% |
| 3980356 | 101.1.11.43 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix › TraY | 0.74 | 53.0 | 5.21e-01 | 78.0% | 70.9% |
| 3586991 | 101.1.11.0 ↗ | alpha arrays › HTH › HTH › Ribbon-helix-helix | 0.70 | 56.0 | 4.92e-01 | 92.0% | 60.0% |
| 3710719 | 103.4.1.0 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein | 0.62 | 43.0 | 3.97e-01 | 76.0% | 56.9% |
| 4031758 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 41.0 | 3.34e-01 | 72.0% | 45.3% |
| 5058284 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.55 | 43.0 | 3.01e-01 | 98.0% | 45.7% |