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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00542
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00542
Identity
- Kingdom:
- phage
Quality
87.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 36-132
Domain cluster:
representative
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3sf6A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.63 | 52.0 | 4.78e-01 | 93.8% | 68.2% |
| 1nktA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 48.0 | 3.50e-01 | 84.5% | 56.4% |
| 1x9fC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 49.0 | 4.27e-01 | 86.6% | 73.2% |
| 2kd1A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.61 | 43.0 | 4.09e-01 | 74.2% | 63.6% |
| 1gcvA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.61 | 49.0 | 4.39e-01 | 88.7% | 80.0% |
| 2xpzA04 | 1.25.40.320 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain | 0.60 | 52.0 | 4.40e-01 | 100.0% | 57.0% |
| 2yqzA02 | 1.10.8.900 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 39.0 | 4.47e-01 | 95.9% | 94.1% |
| 3q5dA02 | 1.20.58.420 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP | 0.59 | 42.0 | 4.27e-01 | 75.3% | 80.4% |
| 3owaA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.58 | 49.0 | 4.43e-01 | 94.8% | 74.6% |
| 4xaiB02 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.58 | 43.0 | 3.43e-01 | 77.3% | 96.9% |
| 4f5cA04 | 1.25.50.20 | Mainly Alpha › Alpha Horseshoe › Zincin-like fold › | 0.58 | 42.0 | 2.98e-01 | 99.0% | 22.9% |
| 3k3uA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 50.0 | 4.47e-01 | 97.9% | 82.5% |
| 1mhyG02 | 1.20.1280.30 | Mainly Alpha › Up-down Bundle › Monooxygenase › Methane monooxygenase, gamma chain, domain 2 | 0.56 | 37.0 | 4.12e-01 | 86.6% | 87.7% |
| 1x9fA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.55 | 44.0 | 3.93e-01 | 89.7% | 77.6% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.54 | 46.0 | 4.39e-01 | 97.9% | 81.4% |
| 3cuqA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 40.0 | 4.26e-01 | 78.4% | 95.1% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.54 | 39.0 | 4.08e-01 | 77.3% | 95.4% |
| 2vm6A00 | 1.10.437.10 | Mainly Alpha › Orthogonal Bundle › Apoptosis Regulator Bcl-x › Blc2-like | 0.52 | 46.0 | 4.10e-01 | 100.0% | 68.1% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.51 | 42.0 | 3.86e-01 | 90.7% | 69.6% |
| 5wp3B00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.50 | 40.0 | 3.96e-01 | 85.6% | 91.2% |
| 2x1lA03 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.50 | 39.0 | 3.26e-01 | 84.5% | 73.3% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989330 | 608.1.1.1 ↗ | alpha arrays › AhpD-like › AhpD-like › AhpD-like › CMD | 0.74 | 50.0 | 4.74e-01 | 86.6% | 58.3% |
| 3722146 | 109.3.1.175 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › LHD_TRPY1 | 0.70 | 63.0 | 5.26e-01 | 100.0% | 69.4% |
| 3428932 | 185.1.1.3 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Hydrophob_seed | 0.66 | 49.0 | 5.29e-01 | 100.0% | 94.9% |
| 3928815 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.65 | 54.0 | 4.55e-01 | 100.0% | 52.9% |
| 3714170 | 5.1.4.74 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N | 0.65 | 50.0 | 3.12e-01 | 100.0% | 15.3% |
| 4888951 | 109.54.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 | 0.64 | 47.0 | 4.66e-01 | 100.0% | 75.0% |
| 4347902 | 109.4.1.19 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vitellogenin_N | 0.64 | 56.0 | 3.70e-01 | 100.0% | 23.5% |
| 4304666 | 532.1.1.0 ↗ | alpha arrays › Type III secretion system domain-like › Antibiotic binding domain of TipA-like multidrug resistance regulators › Antibiotic binding domain of TipA-like multidrug resistance regulators | 0.62 | 49.0 | 4.93e-01 | 86.6% | 88.0% |
| 4927302 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.61 | 52.0 | 4.64e-01 | 93.8% | 77.9% |
| 50204 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.61 | 50.0 | 4.40e-01 | 87.6% | 78.0% |
| 51216 | 106.1.1.0 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like | 0.61 | 48.0 | 4.22e-01 | 86.6% | 73.2% |
| 4059355 | 185.1.1.1 ↗ | alpha superhelices › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin-like › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin/Protein HNS-dependent expression A HdeA › Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin › Tryp_alpha_amyl | 0.60 | 53.0 | 5.15e-01 | 100.0% | 90.0% |
| 3282 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.60 | 49.0 | 4.33e-01 | 89.7% | 78.0% |
| 3959617 | 4033.1.1.0 ↗ | alpha arrays › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like › Acyl-CoA dehydrogenase N-terminal domain-like | 0.59 | 49.0 | 4.78e-01 | 93.8% | 88.2% |
| 4660186 | 2008.1.1.159 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Csa1 | 0.58 | 41.0 | 3.04e-01 | 75.3% | 26.7% |
| 4298231 | 2004.1.1.149 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SecA_DEAD | 0.58 | 43.0 | 2.99e-01 | 78.4% | 41.2% |
| 3625186 | 627.1.1.2 ↗ | alpha complex topology › VPS9 domain › VPS9 domain › VPS9 domain › DUF5601 | 0.58 | 43.0 | 4.33e-01 | 79.4% | 85.0% |
| 4396411 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.55 | 44.0 | 3.95e-01 | 88.7% | 60.7% |
| 1294149 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.55 | 44.0 | 3.91e-01 | 89.7% | 76.5% |
| 3882748 | 109.4.1.1645 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_8, TPR_17, TPR_16 | 0.55 | 34.0 | 2.50e-01 | 100.0% | 21.5% |
| 3346499 | 109.4.1.46 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › IBN_N | 0.54 | 43.0 | 3.96e-01 | 97.9% | 64.4% |
| 3515268 | 186.2.1.0 ↗ | alpha arrays › lambda integrase-N-like › VEFS domain › VEFS domain | 0.53 | 38.0 | 3.72e-01 | 76.3% | 68.6% |
| 3942099 | 605.1.1.209 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › AI-2E_transport | 0.53 | 39.0 | 3.89e-01 | 87.6% | 75.0% |
| 3617691 | 109.4.1.198 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 | 0.53 | 41.0 | 2.54e-01 | 83.5% | 78.5% |
| 4991095 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.52 | 38.0 | 3.35e-01 | 78.4% | 60.0% |
| 4945946 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.52 | 45.0 | 3.66e-01 | 100.0% | 48.7% |
| 3924078 | 1075.1.1.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain | 0.50 | 38.0 | 2.88e-01 | 80.4% | 81.6% |