Back to structures

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00575

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00575

Identity

Kingdom:
phage

Quality

79.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 39-186
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.66 29.0 4.22e-01 70.3% 92.3%
3n8bA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 24.0 3.33e-01 94.6% 72.0%
2z13A00 2.30.29.170 Mainly Beta › Roll › PH-domain like › 0.57 39.0 4.38e-01 95.9% 89.7%
3pieC09 2.30.30.750 Mainly Beta › Roll › SH3 type barrels. › 0.56 28.0 3.42e-01 89.9% 72.7%
3k6yA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.54 34.0 3.91e-01 97.3% 86.0%
2dtcA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 39.0 4.32e-01 98.6% 96.6%
1y5oA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 39.0 4.36e-01 99.3% 100.0%
1jmxA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.52 37.0 4.19e-01 89.2% 98.2%
3jvgA01 3.30.500.10 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › MHC class I-like antigen recognition-like 0.52 33.0 3.17e-01 100.0% 53.2%
3f7wA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.50 29.0 3.57e-01 84.5% 91.2%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3396324 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.65 26.0 3.83e-01 71.6% 83.1%
3734360 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 48.0 4.44e-01 100.0% 81.1%
3517705 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 38.0 2.61e-01 73.6% 95.2%
3514476 220.1.1.27 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_RBD 0.50 39.0 3.69e-01 100.0% 69.1%