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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00585
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00585
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-15_59-184
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00179__D7-149
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18143.7 best | HAD_SAK_2 | 57.5 | 2.90e-15 | 90.6% | 97.1% |
D2
medium
residues 17-55
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q8iA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.66 | 47.0 | 2.98e-01 | 79.5% | 37.3% |
| 7pi0S01 | 1.10.3460.10 | Mainly Alpha › Orthogonal Bundle › Chlorophyll a-b binding protein › Chlorophyll a/b binding protein domain | 0.63 | 47.0 | 3.02e-01 | 82.1% | 19.7% |
| 3cl3A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.62 | 48.0 | 3.96e-01 | 94.9% | 63.1% |
| 2bcqA04 | 3.30.210.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 3 › DNA polymerase, thumb domain | 0.54 | 43.0 | 3.71e-01 | 94.9% | 97.0% |
| 6faiI03 | 1.10.168.20 | Mainly Alpha › Orthogonal Bundle › Phosducin; domain 2 › Ribosomal protein S8e, subdomain | 0.52 | 38.0 | 3.66e-01 | 79.5% | 71.7% |
| 5xxuI03 | 1.10.168.20 | Mainly Alpha › Orthogonal Bundle › Phosducin; domain 2 › Ribosomal protein S8e, subdomain | 0.51 | 36.0 | 3.53e-01 | 79.5% | 69.8% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3943107 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.67 | 50.0 | 4.26e-01 | 82.1% | 50.8% |
| 5009805 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.58 | 42.0 | 3.01e-01 | 79.5% | 35.2% |
| 4869998 | 829.1.1.0 ↗ | a+b duplicates or obligate multimers › NinB › NinB › NinB | 0.56 | 44.0 | 3.82e-01 | 100.0% | 54.3% |
| 4020228 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.56 | 39.0 | 3.65e-01 | 74.4% | 94.0% |
| 3731997 | 3831.1.1.0 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 | 0.56 | 43.0 | 3.15e-01 | 92.3% | 52.8% |
| 4977716 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 39.0 | 2.85e-01 | 100.0% | 97.9% |
| 4589834 | 284.1.1.27 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › PF27392 | 0.51 | 38.0 | 2.95e-01 | 76.9% | 37.6% |