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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00616

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00616

Identity

Kingdom:
phage

Quality

76.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-48
PDB
Domain cluster: representative
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 53.0 5.30e-01 82.2% 100.0%
2yvlA01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.71 56.0 5.13e-01 86.7% 94.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.71 59.0 4.66e-01 100.0% 65.7%
2zbvC02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.69 58.0 4.53e-01 97.8% 91.2%
2b25A01 3.10.330.20 Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › 0.67 52.0 4.83e-01 86.7% 96.5%
2uwqA00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.65 53.0 4.43e-01 97.8% 88.4%
1ub4A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.65 50.0 4.01e-01 93.3% 79.6%
5hk0B00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.64 50.0 3.89e-01 88.9% 79.4%
1yq5A00 2.60.120.670 Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. 0.64 52.0 3.83e-01 100.0% 97.2%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.63 49.0 4.51e-01 91.1% 85.7%
2j8bA00 2.10.60.10 Mainly Beta › Ribbon › CD59 › CD59 0.63 45.0 3.89e-01 80.0% 61.5%
2ki8A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.63 51.0 3.88e-01 100.0% 85.6%
2iv2X04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.62 51.0 4.09e-01 97.8% 98.0%
3meuB02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.62 49.0 4.28e-01 91.1% 93.2%
7nz1G01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.62 50.0 4.05e-01 95.6% 100.0%
1ti2A04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.62 52.0 3.70e-01 100.0% 88.4%
2napA04 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.62 50.0 3.88e-01 97.8% 100.0%
2cs4A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 49.0 3.97e-01 93.3% 80.0%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.61 42.0 3.52e-01 77.8% 51.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.61 50.0 3.52e-01 100.0% 64.1%
1txoB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.60 48.0 3.10e-01 93.3% 77.1%
4ga6A01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.60 47.0 4.03e-01 95.6% 98.8%
6m3aA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 4.34e-01 95.6% 77.3%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.59 48.0 4.23e-01 97.8% 93.2%
8e9gG01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.59 46.0 3.77e-01 95.6% 100.0%
1wlfA01 2.40.40.20 Mainly Beta › Beta Barrel › Barwin-like endoglucanases › 0.59 47.0 4.06e-01 100.0% 97.6%
2rftA02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.59 42.0 2.78e-01 84.4% 61.1%
4kx7A03 2.60.40.1910 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 46.0 3.94e-01 95.6% 88.1%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.58 46.0 3.89e-01 100.0% 97.8%
1ileA02 3.90.740.10 Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.58 40.0 2.68e-01 77.8% 16.9%
3zn6A02 2.60.40.3410 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 47.0 3.95e-01 100.0% 89.7%
5tpvB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 3.45e-01 100.0% 35.5%
1sfnA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 48.0 3.06e-01 100.0% 18.8%
4o9gA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 46.0 3.43e-01 100.0% 35.5%
1vj2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 48.0 3.64e-01 100.0% 42.1%
1sefA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 47.0 3.54e-01 100.0% 42.0%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.56 42.0 2.72e-01 84.4% 50.2%
2wfpA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.56 46.0 3.72e-01 100.0% 49.0%
1f97A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 3.56e-01 97.8% 73.5%
5r0dB01 2.60.34.20 Mainly Beta › Sandwich › Substrate Binding Domain Of DNAk; Chain A, domain 1 › 0.54 41.0 3.00e-01 86.7% 29.4%
4ca1B02 2.60.210.10 Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 0.54 42.0 3.09e-01 88.9% 91.7%
2ic2A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 43.0 3.50e-01 100.0% 80.8%
1xhsA00 3.10.490.10 Alpha Beta › Roll › Hypothetical upf0131 protein ytfp › Gamma-glutamyl cyclotransferase-like 0.53 38.0 2.86e-01 75.6% 65.5%
4iajA00 3.30.1490.390 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Protein of unknown function DUF4649 0.53 38.0 3.45e-01 86.7% 69.7%
4mzuF02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 42.0 3.13e-01 100.0% 33.1%
2wr1A02 3.90.209.20 Alpha Beta › Alpha-Beta Complex › Hemagglutinin (Ha1 Chain); Chain: A; domain 1 › Haemagglutinin, alpha/beta domain, HA1 chain 0.52 41.0 2.81e-01 100.0% 62.4%
1yuzA02 2.20.28.10 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.52 36.0 3.79e-01 80.0% 94.7%
4e1pA00 3.30.60.230 Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain 0.51 34.0 3.30e-01 73.3% 61.8%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5057553 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.72 61.0 4.89e-01 97.8% 95.6%
339198 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.71 56.0 5.17e-01 86.7% 96.5%
5011401 1.1.4.1 beta barrels › cradle loop barrel › RIFT-related › Bacterial fluorinating enzyme-C › SAM_HAT_C 0.69 58.0 4.55e-01 100.0% 84.8%
4932427 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.69 58.0 4.67e-01 95.6% 75.6%
3393303 284.1.1.5 a+b two layers › FKBP-like › FKBP-like › FKBP-like › Gcd10p 0.69 53.0 3.63e-01 86.7% 97.6%
3385821 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.68 58.0 4.85e-01 97.8% 92.5%
3698630 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.68 57.0 4.36e-01 95.6% 70.5%
3599398 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.68 56.0 4.40e-01 95.6% 69.0%
4979291 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.67 54.0 4.73e-01 95.6% 85.3%
4268493 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.67 50.0 5.02e-01 80.0% 91.1%
3398570 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.67 49.0 4.81e-01 80.0% 78.0%
3386113 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.67 56.0 4.39e-01 100.0% 92.4%
5054391 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.66 56.0 4.65e-01 100.0% 95.3%
None 0.66 56.0 4.49e-01 100.0% 93.5%
4930010 1.1.7.141 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin 0.66 55.0 4.45e-01 100.0% 78.9%
5017735 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.66 53.0 4.10e-01 95.6% 69.1%
3703056 284.1.1.5 a+b two layers › FKBP-like › FKBP-like › FKBP-like › Gcd10p 0.65 51.0 3.68e-01 86.7% 99.2%
3988217 241.12.1.0 a+b two layers › Type III secretory system chaperone-like › YktB/PF0168-like › YktB/PF0168-like 0.65 54.0 3.62e-01 100.0% 32.5%
4951062 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.65 50.0 4.65e-01 86.7% 98.3%
4410550 379.1.1.1 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_1 0.65 48.0 4.69e-01 80.0% 84.0%
4011221 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.65 55.0 3.78e-01 100.0% 56.3%
4592699 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.65 53.0 3.95e-01 97.8% 99.2%
4954634 11.1.1.237 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 0.64 50.0 4.22e-01 88.9% 66.3%
3790010 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.64 51.0 4.05e-01 91.1% 72.0%
3602941 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.64 54.0 4.51e-01 100.0% 96.5%
4461643 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.64 45.0 4.21e-01 77.8% 70.0%
3218303 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.63 45.0 4.53e-01 77.8% 82.2%
3407580 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.63 46.0 4.07e-01 80.0% 55.7%
3935777 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.63 51.0 4.38e-01 97.8% 91.3%
4952902 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 50.0 3.88e-01 100.0% 80.0%
4933386 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.62 48.0 3.97e-01 86.7% 58.8%
21 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 51.0 3.77e-01 97.8% 72.9%
4508213 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 51.0 3.84e-01 97.8% 92.8%
3968980 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 53.0 3.53e-01 100.0% 61.5%
4952484 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.05e-01 100.0% 86.7%
4954467 11.1.1.237 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MG4 0.62 51.0 4.29e-01 100.0% 81.2%
4005326 109.2.1.42 alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › MGH1-like_GH 0.62 44.0 2.50e-01 77.8% 6.9%
3993834 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.62 52.0 4.07e-01 100.0% 93.3%
4995426 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 51.0 4.00e-01 100.0% 82.7%
4451053 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.62 46.0 4.50e-01 80.0% 76.0%
2968642 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.62 51.0 3.85e-01 100.0% 81.1%
4952566 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 51.0 4.08e-01 100.0% 69.0%
4964066 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.62 50.0 3.80e-01 100.0% 66.4%
4940929 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 51.0 3.96e-01 100.0% 58.2%
3934699 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.61 45.0 3.01e-01 82.2% 26.0%
5013618 1.1.2.4 beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding 0.60 48.0 3.64e-01 97.8% 86.9%
4953824 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 49.0 4.17e-01 100.0% 82.4%
4952274 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 3.93e-01 93.3% 81.1%
5040738 284.1.1.0 a+b two layers › FKBP-like › FKBP-like › FKBP-like 0.60 43.0 4.06e-01 82.2% 98.3%
3520053 7590.1.1.3 a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid 0.60 41.0 2.87e-01 75.6% 96.6%
3326132 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 52.0 4.62e-01 100.0% 81.5%
4122341 1.1.2.25 beta barrels › cradle loop barrel › RIFT-related › double psi › Glyco_hydro_75 0.59 49.0 3.21e-01 100.0% 63.4%
4486406 3430.1.1.1 a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.59 50.0 3.84e-01 97.8% 43.6%
4980383 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 48.0 3.98e-01 100.0% 81.1%
4947000 1056.1.1.1 a+b two layers › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › tRNA pseudouridine synthase TruD insertion domain › TruD 0.58 45.0 2.92e-01 88.9% 18.6%
3828348 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.31e-01 100.0% 84.6%
4072878 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 45.0 3.97e-01 100.0% 90.0%
3721062 4.1.1.225 beta barrels › SH3 › SH3 › SH3 › DUF7025 0.57 46.0 3.88e-01 97.8% 95.3%
5013743 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.57 46.0 4.07e-01 100.0% 81.3%
3929258 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.56 45.0 3.75e-01 97.8% 83.3%
3499855 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 43.0 3.89e-01 100.0% 96.0%
4959469 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 44.0 3.62e-01 95.6% 60.0%
3258358 10.12.1.1 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › cNMP_binding 0.54 44.0 3.35e-01 100.0% 41.6%
5025287 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 41.0 3.64e-01 91.1% 96.0%
2475381 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.53 42.0 2.89e-01 100.0% 71.3%
4949416 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 42.0 3.65e-01 95.6% 65.0%
4934788 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.53 41.0 3.65e-01 95.6% 69.3%
4969686 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.53 41.0 3.58e-01 95.6% 65.0%
5060117 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 39.0 3.49e-01 95.6% 67.5%
3363166 2002.1.1.106 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › GDPD 0.51 38.0 2.38e-01 88.9% 23.4%