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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00621
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00621
Identity
- Kingdom:
- phage
Quality
87.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 29-81
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1rypL00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.73 | 60.0 | 3.96e-01 | 90.6% | 91.5% |
| 3d6wB02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.66 | 41.0 | 4.54e-01 | 86.8% | 84.6% |
| 3fogA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.65 | 48.0 | 3.94e-01 | 96.2% | 42.2% |
| 2hzgB01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.61 | 45.0 | 3.34e-01 | 81.1% | 68.5% |
| 2nmlA00 | 3.30.2260.10 | Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary | 0.61 | 49.0 | 4.21e-01 | 100.0% | 99.0% |
| 1rvjH02 | 3.90.50.10 | Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 | 0.60 | 46.0 | 3.43e-01 | 84.9% | 33.3% |
| 2jwkA00 | 3.30.420.270 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.58 | 39.0 | 3.52e-01 | 94.3% | 50.0% |
| 1r26A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 42.0 | 3.40e-01 | 83.0% | 69.0% |
| 1n7zA01 | 2.60.340.10 | Mainly Beta › Sandwich › baseplate structural protein gp8, domain 1 › baseplate structural protein gp8, domain 1 | 0.57 | 42.0 | 3.00e-01 | 81.1% | 81.2% |
| 2pkhA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.56 | 39.0 | 3.00e-01 | 75.5% | 36.9% |
| 6g62A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.55 | 42.0 | 3.37e-01 | 86.8% | 68.7% |
| 7x68A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 35.0 | 3.58e-01 | 79.2% | 68.0% |
| 7kfuC01 | 3.100.10.20 | Alpha Beta › Ribosomal Protein L15; Chain: K; domain 2 › Ribosomal Protein L15; Chain: K; domain 2 › CRISPR-associated endonuclease Cas1, N-terminal domain | 0.54 | 43.0 | 3.81e-01 | 86.8% | 69.3% |
| 3ddvB01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.53 | 40.0 | 3.00e-01 | 81.1% | 38.7% |
| 4hasA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.53 | 42.0 | 3.49e-01 | 100.0% | 47.1% |
| 1btkA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 44.0 | 3.20e-01 | 98.1% | 80.6% |
| 2dy1A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 42.0 | 2.58e-01 | 100.0% | 16.4% |
| 3eetA02 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.52 | 40.0 | 2.94e-01 | 90.6% | 72.0% |
| 7tbdB02 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.51 | 39.0 | 2.86e-01 | 86.8% | 63.8% |
| 2fa1A00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.51 | 35.0 | 2.60e-01 | 75.5% | 32.1% |
| 2ikkA00 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.51 | 42.0 | 3.13e-01 | 96.2% | 79.5% |
| 3cnvA01 | 3.40.1410.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chorismate lyase › Chorismate lyase-like | 0.50 | 40.0 | 2.87e-01 | 86.8% | 45.8% |
ECOD (38)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3212137 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.75 | 47.0 | 3.03e-01 | 83.0% | 13.9% |
| 4558116 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.67 | 47.0 | 3.47e-01 | 73.6% | 91.2% |
| 4465692 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.67 | 47.0 | 3.34e-01 | 73.6% | 86.1% |
| 4993067 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.66 | 44.0 | 3.13e-01 | 73.6% | 23.9% |
| 3600494 | 77.2.1.0 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N | 0.65 | 40.0 | 3.36e-01 | 83.0% | 34.7% |
| 4672303 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.65 | 52.0 | 3.73e-01 | 90.6% | 73.6% |
| 4970384 | 243.6.1.9 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 | 0.64 | 39.0 | 3.38e-01 | 73.6% | 38.8% |
| 4534075 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.64 | 47.0 | 3.38e-01 | 79.2% | 82.5% |
| 4175039 | 3604.1.1.1 ↗ | a+b two layers › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Uncharacterized protein MK0293 C-terminal domain › Ni_insertion | 0.64 | 40.0 | 3.97e-01 | 75.5% | 60.0% |
| 4091257 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.64 | 47.0 | 3.39e-01 | 79.2% | 85.2% |
| 4246319 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.62 | 50.0 | 3.63e-01 | 90.6% | 74.4% |
| 4075937 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.62 | 49.0 | 3.49e-01 | 88.7% | 68.2% |
| 4492762 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.61 | 49.0 | 3.54e-01 | 90.6% | 74.4% |
| 3502426 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.59 | 44.0 | 3.86e-01 | 83.0% | 89.4% |
| 4245681 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.58 | 45.0 | 3.31e-01 | 90.6% | 69.7% |
| 3725727 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.58 | 45.0 | 3.95e-01 | 88.7% | 68.2% |
| 3581093 | 4292.2.1.0 ↗ | a+b two layers › FlaG-like › MAGUK binding stalk (MBS) domain › MAGUK binding stalk (MBS) domain | 0.57 | 46.0 | 4.10e-01 | 94.3% | 62.5% |
| 4995647 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.56 | 35.0 | 3.48e-01 | 79.2% | 60.0% |
| 3742309 | 3792.1.1.2 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › APC1_3rd | 0.55 | 43.0 | 3.84e-01 | 88.7% | 71.2% |
| 3262524 | 10.10.1.6 ↗ | beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › DUF4457 | 0.55 | 41.0 | 3.37e-01 | 81.1% | 97.0% |
| 4975521 | 70.1.1.1 ↗ | beta barrels › beta-clip › MoeA C-terminal domain-like › MoeA C-terminal domain-like › MoeA_C | 0.54 | 37.0 | 3.15e-01 | 71.7% | 72.9% |
| 4002571 | 277.1.1.1 ↗ | a+b two layers › PX domain › PX domain › PX domain › PX | 0.53 | 44.0 | 3.54e-01 | 100.0% | 46.7% |
| 4338739 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.53 | 46.0 | 3.30e-01 | 100.0% | 68.8% |
| 4102276 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.53 | 46.0 | 3.31e-01 | 100.0% | 68.8% |
| 4579706 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.53 | 45.0 | 3.23e-01 | 100.0% | 66.1% |
| 3219798 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.53 | 40.0 | 2.95e-01 | 86.8% | 83.7% |
| 3696587 | 109.3.1.175 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › LHD_TRPY1 | 0.52 | 40.0 | 2.96e-01 | 90.6% | 81.8% |
| 5072132 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.52 | 42.0 | 3.75e-01 | 92.5% | 73.8% |
| 4262818 | 1046.1.1.1 ↗ | alpha bundles › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Lipoprotein signal peptidase › Peptidase_A8 | 0.52 | 44.0 | 3.21e-01 | 100.0% | 70.6% |
| 5051102 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 37.0 | 2.84e-01 | 79.2% | 39.3% |
| 3402914 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.52 | 44.0 | 3.81e-01 | 92.5% | 67.1% |
| 4938416 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.51 | 36.0 | 3.06e-01 | 81.1% | 44.4% |
| 3715994 | 10.32.1.105 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › DUF4457 | 0.51 | 38.0 | 2.73e-01 | 88.7% | 87.9% |
| 4080869 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.51 | 37.0 | 3.44e-01 | 81.1% | 81.4% |
| 4540866 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.50 | 34.0 | 3.34e-01 | 79.2% | 63.3% |
| 3468152 | 65.1.1.4 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › HUTI_composite_bact | 0.50 | 36.0 | 2.82e-01 | 79.2% | 34.2% |
| 5079398 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.50 | 35.0 | 3.42e-01 | 79.2% | 66.7% |
| 4299686 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.50 | 36.0 | 2.84e-01 | 79.2% | 45.4% |