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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00668
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00668
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-151
Domain cluster:
rep: LacPavin_0818_WC55_scaffold_0-10091_curated_closed_complete_start-adj_prodigal-single.1__X__X__00310__D105-236
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8axjA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.72 | 55.0 | 5.83e-01 | 92.1% | 87.6% |
| 2wfhA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.71 | 52.0 | 4.88e-01 | 95.4% | 63.0% |
| 3bz5A01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.70 | 59.0 | 4.33e-01 | 98.7% | 35.9% |
| 2ifgA01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.66 | 53.0 | 5.29e-01 | 96.0% | 82.1% |
| 4ecnA03 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.65 | 60.0 | 3.94e-01 | 100.0% | 48.5% |
| 1o6vB01 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.63 | 57.0 | 4.15e-01 | 95.4% | 38.0% |
| 4v2dA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.62 | 57.0 | 4.35e-01 | 98.0% | 49.8% |
| 2xwtC00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.62 | 56.0 | 4.79e-01 | 97.4% | 70.5% |
| 3wpcA00 | 3.80.10.10 | Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor | 0.62 | 56.0 | 3.53e-01 | 97.4% | 25.7% |
| 3i2tA03 | 3.80.20.20 | Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain | 0.61 | 55.0 | 5.33e-01 | 98.0% | 96.4% |
| 1igrA01 | 3.80.20.20 | Alpha Beta › Alpha-Beta Horseshoe › 24 nucleotide stem-loop, u2 snrnp hairpin iv. U2 a'; Chain A › Receptor L-domain | 0.60 | 54.0 | 5.01e-01 | 98.0% | 78.8% |
| 4pmhA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.58 | 53.0 | 3.97e-01 | 100.0% | 86.6% |
| 6gn6A01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 40.0 | 3.12e-01 | 80.1% | 65.4% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3806888 | 207.1.1.50 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_4,LRR_6 | 0.68 | 58.0 | 4.88e-01 | 96.0% | 57.0% |
| 4864777 | 2004.1.1.733 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › LRR_1, LRR_5, LRR_8 | 0.65 | 56.0 | 4.02e-01 | 95.4% | 34.4% |
| 1031127 | 207.1.1.30 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_10 | 0.65 | 60.0 | 3.94e-01 | 100.0% | 48.5% |
| 4057229 | 207.1.1.130 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_5, LRR_8 | 0.63 | 57.0 | 4.05e-01 | 96.7% | 35.3% |
| 3675566 | 207.1.1.151 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRRNT_2, LRR_4, LRR_8 | 0.63 | 58.0 | 5.09e-01 | 99.3% | 95.3% |
| 3500054 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.62 | 57.0 | 4.26e-01 | 97.4% | 58.6% |
| 3213047 | 207.1.1.132 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1, LRR_6, LRR_8 | 0.62 | 57.0 | 3.77e-01 | 98.0% | 28.6% |
| 3485165 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.61 | 50.0 | 4.54e-01 | 87.4% | 68.3% |
| 3885740 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 47.0 | 4.86e-01 | 96.7% | 87.1% |
| 3229575 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.60 | 52.0 | 5.16e-01 | 95.4% | 86.9% |
| 3235505 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.60 | 52.0 | 5.24e-01 | 96.0% | 91.6% |
| 3693518 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 55.0 | 4.22e-01 | 98.7% | 53.3% |
| 3568348 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.60 | 46.0 | 4.66e-01 | 94.7% | 81.3% |
| 3217042 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.60 | 52.0 | 5.33e-01 | 98.0% | 97.9% |
| 3861250 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.59 | 47.0 | 4.66e-01 | 96.7% | 80.6% |
| 3409179 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.59 | 46.0 | 4.37e-01 | 82.8% | 71.1% |
| 3622175 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.58 | 52.0 | 4.57e-01 | 96.7% | 78.9% |
| 3215066 | 207.1.1.5 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Recep_L_domain | 0.58 | 49.0 | 5.09e-01 | 93.4% | 98.6% |
| 3932278 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 53.0 | 4.09e-01 | 98.7% | 49.5% |
| 3495805 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.55 | 49.0 | 4.54e-01 | 98.0% | 86.7% |
| 3537180 | 207.1.1.83 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › Pannexin_like | 0.52 | 47.0 | 3.99e-01 | 99.3% | 72.9% |
| 3779743 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.52 | 48.0 | 4.24e-01 | 100.0% | 89.3% |
D2
medium
residues 152-227
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2m7lA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.51 | 38.0 | 3.72e-01 | 80.3% | 80.2% |
| 4acoA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.51 | 38.0 | 3.46e-01 | 82.9% | 80.9% |
| 1vq2A00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.51 | 37.0 | 2.99e-01 | 80.3% | 91.3% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3703210 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.60 | 44.0 | 4.11e-01 | 80.3% | 81.0% |
| 4933325 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.58 | 52.0 | 3.84e-01 | 98.7% | 81.0% |
| 5046321 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.56 | 49.0 | 3.62e-01 | 100.0% | 60.9% |
| 4097565 | 101.1.2.29 ↗ | alpha arrays › HTH › HTH › winged helix domain › PTS_2-RNA | 0.54 | 43.0 | 4.28e-01 | 96.1% | 85.0% |
| 4052320 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.52 | 42.0 | 3.31e-01 | 92.1% | 77.1% |
| 3776382 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.51 | 42.0 | 3.90e-01 | 94.7% | 75.0% |