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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00671

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00671

Identity

Kingdom:
phage

Quality

92.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-46
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 58.0 4.19e-01 94.7% 66.4%
3fhwA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.66 53.0 4.04e-01 92.1% 84.8%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.66 50.0 4.34e-01 97.4% 51.5%
1mo9A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 50.0 3.54e-01 97.4% 26.7%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.63 48.0 4.15e-01 92.1% 50.7%
1cjaA01 3.30.1010.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 0.63 50.0 3.45e-01 94.7% 66.0%
2ltsA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.61 50.0 4.00e-01 100.0% 61.6%
2y24A01 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.61 50.0 3.67e-01 97.4% 98.1%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.59 43.0 3.91e-01 97.4% 54.1%
3my2A00 2.60.450.10 Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain 0.59 45.0 3.16e-01 86.8% 43.7%
2hd9A00 3.10.590.10 Alpha Beta › Roll › ph1033 like fold › ph1033 like domains 0.58 41.0 2.92e-01 81.6% 72.4%
4at0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 44.0 2.66e-01 97.4% 50.8%
2n3gA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 45.0 3.89e-01 100.0% 84.7%
2fgtA02 3.10.450.310 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.57 48.0 3.85e-01 100.0% 90.2%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.57 44.0 4.02e-01 92.1% 73.7%
1uh9A02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.56 43.0 2.98e-01 92.1% 75.2%
4iupB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.56 45.0 3.98e-01 100.0% 80.6%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.55 41.0 3.52e-01 100.0% 67.9%
4pavB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 40.0 3.02e-01 97.4% 79.4%
3eo6A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.54 40.0 3.16e-01 97.4% 91.5%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.53 42.0 3.28e-01 100.0% 47.1%
4cc2A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.53 40.0 3.62e-01 97.4% 77.8%
1rjtA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 36.0 3.32e-01 92.1% 53.4%
1g6zA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 37.0 3.25e-01 84.2% 54.3%
4pbdA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 40.0 3.16e-01 100.0% 53.9%
4zzfA02 2.60.40.4070 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 3.08e-01 94.7% 82.3%
2gu1A01 3.10.450.350 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 42.0 3.37e-01 100.0% 50.0%
6guuA01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 40.0 3.74e-01 94.7% 70.4%
1b44D00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 35.0 2.92e-01 94.7% 73.6%
1nh2C00 2.30.18.10 Mainly Beta › Roll › TATA box binding Protein, subunit D; domain 2 › Transcription factor IIA (TFIIA), beta-barrel domain 0.51 36.0 3.32e-01 76.3% 74.0%
ECOD (38)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3883586 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.73 56.0 4.55e-01 97.4% 44.0%
3505711 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.69 62.0 4.70e-01 100.0% 57.6%
3888605 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.65 49.0 4.08e-01 92.1% 44.6%
4388256 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 57.0 3.95e-01 100.0% 76.0%
3694693 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.63 48.0 4.20e-01 97.4% 52.3%
9277 2003.1.2.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox 0.63 50.0 3.64e-01 97.4% 50.4%
3917584 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.63 47.0 3.97e-01 94.7% 47.1%
5035835 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.62 52.0 4.58e-01 100.0% 73.3%
4162406 244.1.1.11 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.61 48.0 2.75e-01 94.7% 39.2%
4306185 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.60 49.0 3.33e-01 97.4% 45.2%
4965107 2003.1.2.7 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2 0.60 47.0 2.81e-01 97.4% 28.0%
3943894 77.1.1.7 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.60 43.0 3.08e-01 81.6% 24.0%
4995089 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.60 47.0 3.24e-01 97.4% 66.7%
None 0.60 48.0 2.84e-01 97.4% 59.2%
3898211 1170.1.1.1 beta barrels › IL8-related › IL8-related › IL8 › IL8 0.60 45.0 3.84e-01 97.4% 47.3%
3174528 244.1.1.11 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › SE 0.59 46.0 2.72e-01 94.7% 48.1%
5010554 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.59 49.0 4.21e-01 100.0% 70.8%
4330184 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 46.0 3.41e-01 97.4% 47.2%
4008120 5.1.5.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.58 41.0 3.00e-01 81.6% 25.0%
3953875 211.1.1.1 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase 0.57 43.0 3.04e-01 94.7% 72.7%
3888035 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 42.0 3.31e-01 94.7% 75.0%
3477781 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.56 38.0 2.53e-01 81.6% 18.1%
3505589 4.1.1.287 beta barrels › SH3 › SH3 › SH3 › DUF5641 0.55 46.0 3.36e-01 100.0% 38.3%
3632189 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.54 41.0 3.63e-01 92.1% 56.9%
4981612 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.54 40.0 3.40e-01 100.0% 91.8%
3955267 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.53 44.0 3.12e-01 100.0% 36.6%
3286632 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 39.0 3.38e-01 97.4% 47.1%
3936287 11.12.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like 0.53 41.0 2.71e-01 94.7% 52.6%
3576847 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.53 41.0 2.61e-01 94.7% 30.4%
4952713 284.1.2.0 a+b two layers › FKBP-like › FKBP-like › Conserved carboxy-terminal domain of oxidative-stress-responsive kinase 1-like kinases 0.52 36.0 2.83e-01 84.2% 27.6%
3914258 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.52 39.0 2.90e-01 97.4% 60.8%
5054896 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.52 40.0 3.17e-01 97.4% 59.0%
5051933 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.52 41.0 2.79e-01 97.4% 35.9%
4316044 101.1.2.388 alpha arrays › HTH › HTH › winged helix domain › YjhX_toxin 0.52 39.0 3.23e-01 100.0% 48.9%
3957864 881.1.1.17 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › DUF3710 0.51 39.0 2.74e-01 100.0% 61.8%
4960808 11.1.4.23 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › CarboxypepD_reg 0.51 34.0 2.90e-01 78.9% 35.3%
3411216 79.1.1.18 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Sarcoglycan_1 0.50 35.0 2.72e-01 76.3% 28.0%
4375009 11.12.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › Nicotinic receptor ligand binding domain-like › Nicotinic receptor ligand binding domain-like › Neur_chan_LBD 0.50 38.0 2.51e-01 97.4% 72.0%
D2 high residues 66-164
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01588.27 best tRNA_bind 53.0 4.10e-14 89.9% 78.1%
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1eujA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.92 81.0 6.60e-01 100.0% 54.9%
6ipaA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.92 81.0 6.57e-01 100.0% 54.5%
1gd7A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.90 80.0 7.75e-01 100.0% 84.4%
2e8gA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.88 69.0 6.54e-01 100.0% 69.8%
1pxfA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.86 75.0 7.22e-01 100.0% 82.9%
1pybA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.85 73.0 7.14e-01 100.0% 84.1%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.71 51.0 5.53e-01 80.8% 89.0%
4da2A01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.70 50.0 5.56e-01 97.0% 93.7%
1jb7A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 50.0 4.76e-01 76.8% 65.5%
1wfqA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 48.0 5.56e-01 76.8% 100.0%
1x6oA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 47.0 5.19e-01 75.8% 93.7%
1jb3A00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.65 50.0 4.61e-01 81.8% 80.3%
4jbmB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.79e-01 75.8% 81.2%
4l5tB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 47.0 4.88e-01 94.9% 82.4%
3f2bA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 50.0 5.16e-01 94.9% 86.5%
3rn5A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.64 46.0 4.81e-01 94.9% 81.5%
1wydA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 47.0 4.73e-01 94.9% 76.5%
3k59A01 2.40.50.590 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › DNA polymerase B, N domain, beta-barrel 0.63 46.0 4.96e-01 76.8% 89.4%
5zg8A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 49.0 4.86e-01 94.9% 79.4%
3u4zA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 48.0 4.72e-01 94.9% 74.3%
1uapA00 2.40.50.120 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 48.0 4.37e-01 81.8% 69.5%
5aj3Q00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.61e-01 79.8% 74.3%
3nemA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 47.0 4.65e-01 94.9% 77.1%
4l5rC02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.61 44.0 4.59e-01 94.9% 83.1%
1ebdA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 32.0 2.97e-01 100.0% 41.3%
1bbuA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 46.0 4.09e-01 94.9% 57.9%
5gqoA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 49.0 4.99e-01 89.9% 99.0%
4joiC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 45.0 4.22e-01 79.8% 77.1%
2gpiA00 3.30.160.140 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Shew3726-like 0.59 42.0 4.33e-01 73.7% 96.7%
3amuA02 2.40.50.1010 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 52.0 4.64e-01 98.0% 97.8%
6l4qB01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 51.0 4.59e-01 97.0% 77.8%
2l0cA00 2.40.50.660 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 44.0 4.50e-01 82.8% 90.7%
2k75A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 48.0 4.83e-01 98.0% 89.3%
4up7A01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.57 50.0 4.31e-01 96.0% 67.8%
2kbnA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 48.0 4.64e-01 97.0% 83.5%
3hkzG00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 50.0 4.85e-01 99.0% 100.0%
6nrzA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 46.0 4.01e-01 94.9% 58.1%
3i7fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.55 49.0 4.50e-01 97.0% 79.7%
6gmhH01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 44.0 3.94e-01 91.9% 98.6%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.53 46.0 3.30e-01 100.0% 90.6%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 39.0 2.56e-01 78.8% 47.3%
4gl6A01 3.10.450.570 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Domain of unknown function (DUF5037), N-terminal subdomain 0.52 33.0 3.62e-01 70.7% 76.8%
ECOD (95)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5047281 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.96 86.0 8.31e-01 100.0% 84.4%
4275510 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.96 82.0 7.73e-01 100.0% 77.0%
159340 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.96 84.0 8.13e-01 100.0% 82.6%
4593898 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.95 79.0 6.59e-01 99.0% 54.8%
4462732 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.95 84.0 4.91e-01 100.0% 14.5%
4946098 140.1.1.37 alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › tRNA_bind 0.95 83.0 5.35e-01 100.0% 24.7%
4589285 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.94 80.0 4.76e-01 100.0% 14.6%
4948216 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.94 83.0 8.13e-01 100.0% 85.7%
3589242 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.94 85.0 7.71e-01 100.0% 74.2%
4272485 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.94 81.0 5.24e-01 100.0% 23.9%
3595882 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.94 79.0 6.16e-01 98.0% 45.8%
5033827 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.93 83.0 6.89e-01 100.0% 58.7%
4400456 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.93 84.0 7.85e-01 100.0% 80.0%
4935476 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.93 80.0 6.71e-01 100.0% 57.4%
5058033 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.93 81.0 7.97e-01 98.0% 86.4%
4644967 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.92 81.0 5.24e-01 100.0% 24.7%
3574444 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.92 80.0 4.91e-01 99.0% 18.6%
3834488 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.92 80.0 4.64e-01 97.0% 13.0%
3714992 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.92 79.0 6.49e-01 100.0% 53.9%
5083534 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.92 81.0 6.56e-01 100.0% 53.5%
2475141 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.92 80.0 6.56e-01 100.0% 54.5%
4977142 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.92 82.0 7.75e-01 100.0% 80.7%
3641837 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.92 79.0 4.98e-01 97.0% 20.7%
2086916 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.92 80.0 7.62e-01 100.0% 80.4%
5037694 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.92 78.0 7.78e-01 99.0% 87.0%
3506697 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.91 80.0 5.10e-01 100.0% 22.8%
3174096 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.91 81.0 6.08e-01 100.0% 43.3%
3501005 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.91 80.0 7.87e-01 100.0% 86.7%
5069936 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.91 80.0 6.25e-01 100.0% 47.9%
None 0.91 81.0 4.75e-01 100.0% 14.8%
4192589 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.91 80.0 4.75e-01 100.0% 14.8%
None 0.91 80.0 4.71e-01 99.0% 15.0%
4447651 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.90 84.0 6.71e-01 100.0% 54.9%
4969316 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.90 79.0 6.96e-01 100.0% 66.7%
5047985 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.90 67.0 6.48e-01 82.8% 69.1%
None 0.90 80.0 4.73e-01 100.0% 14.9%
None 0.90 80.0 5.26e-01 100.0% 26.8%
None 0.90 80.0 4.70e-01 100.0% 14.1%
4209483 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.90 80.0 6.49e-01 100.0% 54.1%
5054257 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.90 65.0 6.99e-01 81.8% 85.9%
4533730 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.90 80.0 4.70e-01 100.0% 14.0%
3301670 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.90 82.0 6.48e-01 100.0% 52.5%
4989464 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.89 73.0 7.39e-01 100.0% 85.7%
3489935 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.89 84.0 6.50e-01 100.0% 50.3%
3573804 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.89 81.0 6.48e-01 100.0% 54.3%
3272487 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.88 77.0 6.32e-01 94.9% 55.6%
4276421 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.88 80.0 6.98e-01 100.0% 67.4%
197701 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.88 69.0 6.59e-01 100.0% 71.1%
317158 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.86 77.0 7.41e-01 100.0% 83.8%
3594168 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.86 82.0 6.36e-01 100.0% 57.9%
3275994 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.85 82.0 7.37e-01 100.0% 79.7%
5000491 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 64.0 6.16e-01 98.0% 70.0%
4025155 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.85 66.0 5.75e-01 94.9% 57.1%
167481 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.85 76.0 7.11e-01 100.0% 79.7%
3722380 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.84 81.0 6.02e-01 100.0% 53.5%
5039475 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.84 74.0 6.99e-01 100.0% 80.0%
4073317 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.76 70.0 6.64e-01 97.0% 87.0%
4045594 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.75 52.0 5.89e-01 74.7% 93.3%
4265822 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.74 67.0 6.43e-01 97.0% 85.5%
4208913 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.74 52.0 5.81e-01 76.8% 91.3%
4959053 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.73 50.0 5.79e-01 78.8% 100.0%
4038271 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.73 65.0 6.17e-01 97.0% 81.7%
4223430 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.72 68.0 6.34e-01 100.0% 85.0%
4524732 2.1.1.16 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_bind 0.72 66.0 6.15e-01 97.0% 84.2%
381 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.71 51.0 5.68e-01 99.0% 94.9%
4936449 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 49.0 5.61e-01 98.0% 100.0%
4032927 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.70 51.0 4.87e-01 94.9% 66.1%
4096168 2.1.1.57 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N 0.69 49.0 5.45e-01 76.8% 91.3%
4032678 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.68 50.0 5.03e-01 94.9% 77.0%
4349584 2.1.1.127 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti_2 0.68 50.0 4.63e-01 96.0% 61.6%
4045587 2.1.1.79 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecG_wedge 0.66 50.0 5.09e-01 78.8% 95.8%
5013366 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.66 50.0 4.70e-01 79.8% 75.8%
4278743 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.65 49.0 4.76e-01 94.9% 71.8%
3230022 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 43.0 4.87e-01 93.9% 95.7%
4065889 2007.1.12.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Type II 3-dehydroquinate dehydratase 0.64 47.0 3.38e-01 76.8% 26.7%
4250120 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 47.0 4.52e-01 94.9% 67.0%
4936924 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 49.0 4.82e-01 80.8% 82.9%
3286192 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.64 47.0 4.77e-01 78.8% 78.0%
4099166 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 47.0 4.60e-01 78.8% 86.4%
4259684 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.63 46.0 4.52e-01 94.9% 70.0%
4927910 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.62 47.0 5.09e-01 93.9% 97.6%
4032340 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.59 47.0 4.69e-01 94.9% 81.0%
4945259 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 5.06e-01 98.0% 95.8%
3989249 2.1.1.85 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB 0.58 51.0 4.92e-01 98.0% 95.7%
4950974 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.58 49.0 4.84e-01 97.0% 86.7%
3658019 2.1.1.285 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3, CDC24_OB2 0.57 51.0 3.65e-01 100.0% 47.3%
3972959 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 51.0 4.97e-01 98.0% 98.2%
4107771 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.56 47.0 4.41e-01 96.0% 75.8%
4962106 2.4.1.2 beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 0.56 48.0 4.42e-01 91.9% 100.0%
3969368 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 47.0 4.55e-01 96.0% 82.7%
3964220 2.2.1.0 beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins 0.56 45.0 4.67e-01 91.9% 97.8%
3959920 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.55 48.0 4.60e-01 97.0% 82.6%
4064637 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 49.0 4.34e-01 99.0% 71.7%
3511262 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.55 40.0 4.25e-01 75.8% 96.5%
4182108 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.54 48.0 4.61e-01 100.0% 84.3%