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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00723

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00723

Identity

Kingdom:
phage

Quality

86.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 41-131
PDB
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1w5rA01 3.30.2140.10 Alpha Beta › 2-Layer Sandwich › Arylamine N-acetyltransferase fold › Arylamine N-acetyltransferase 0.73 51.0 4.03e-01 71.4% 85.5%
1vyfA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.73 50.0 4.36e-01 71.4% 89.6%
2rcqA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.69 50.0 4.26e-01 74.7% 70.9%
2plgA01 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.67 47.0 4.09e-01 71.4% 80.3%
2ntkB00 3.60.20.20 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like 0.66 51.0 3.93e-01 82.4% 99.0%
4ftxB01 3.30.450.30 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic 0.64 44.0 3.94e-01 71.4% 94.5%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.62 43.0 3.15e-01 70.3% 59.0%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.62 44.0 3.17e-01 72.5% 91.2%
2xqyA01 3.30.500.50 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.62 46.0 3.74e-01 79.1% 89.9%
4csdB00 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.62 48.0 3.46e-01 83.5% 97.8%
2giaB00 2.30.31.40 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › 0.60 51.0 4.41e-01 94.5% 92.5%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.60 42.0 4.13e-01 74.7% 88.2%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.60 50.0 4.44e-01 89.0% 89.7%
3ei3A02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 46.0 3.13e-01 82.4% 82.4%
4iglB00 2.180.10.10 Mainly Beta › Shell › RHS repeat-associated core › RHS repeat-associated core 0.59 44.0 2.68e-01 80.2% 39.5%
7dpyB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.59 41.0 4.33e-01 72.5% 94.0%
1vr8A00 3.40.1000.20 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › TM1622-like 0.59 42.0 3.67e-01 72.5% 78.5%
1okqA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 44.0 3.55e-01 78.0% 88.6%
1oq1B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 40.0 3.04e-01 71.4% 68.0%
4rs6A01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.58 48.0 4.36e-01 86.8% 86.4%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.58 50.0 4.04e-01 96.7% 96.7%
4fr9A00 3.10.450.360 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 40.0 3.44e-01 70.3% 71.6%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.49e-01 81.3% 88.2%
1e8oD00 3.30.720.10 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 0.57 43.0 4.61e-01 94.5% 97.4%
1pz7A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 3.40e-01 80.2% 87.8%
3sh4A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.57 43.0 3.37e-01 80.2% 87.7%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 3.63e-01 78.0% 94.2%
3qcwA02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 42.0 3.32e-01 81.3% 89.2%
5agvA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.55 40.0 3.58e-01 75.8% 70.2%
5vxzA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 40.0 3.17e-01 79.1% 79.3%
3ip3A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 47.0 3.69e-01 98.9% 95.1%
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 3.18e-01 81.3% 84.8%
8hpoK01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 40.0 2.67e-01 81.3% 86.9%
4qa8A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.52 42.0 3.29e-01 90.1% 63.3%
2qm4A01 2.170.210.10 Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal 0.51 37.0 3.30e-01 78.0% 97.2%
1vpkA02 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 37.0 3.34e-01 76.9% 78.9%
2nykA01 3.30.500.30 Alpha Beta › 2-Layer Sandwich › Murine Class I Major Histocompatibility Complex, H2-DB; Chain A, domain 1 › 0.50 39.0 3.33e-01 96.7% 50.7%
1yqfB00 3.10.280.10 Alpha Beta › Roll › Mitochondrial Matrix Protein; Chain A › Mitochondrial glycoprotein 0.50 43.0 3.54e-01 97.8% 81.9%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 38.0 3.53e-01 82.4% 92.5%
3zxjA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 43.0 2.97e-01 94.5% 80.4%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5015520 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.70 53.0 4.06e-01 80.2% 82.4%
3895500 6129.1.1.11 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › ITI_HC_C 0.69 54.0 3.95e-01 82.4% 82.5%
3474457 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.69 47.0 4.69e-01 70.3% 69.5%
3703598 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.69 47.0 4.12e-01 70.3% 61.5%
3235531 207.1.1.52 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FBA_2 0.68 56.0 4.08e-01 89.0% 62.1%
4260682 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.67 51.0 3.99e-01 79.1% 78.9%
3769483 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.67 46.0 4.16e-01 71.4% 71.2%
3239485 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.67 54.0 4.74e-01 85.7% 95.4%
3222321 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.66 53.0 3.78e-01 84.6% 57.6%
3402152 216.1.1.0 a+b two layers › UBC-like › UBC-like › UBC-like 0.66 46.0 4.18e-01 71.4% 86.7%
3704328 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.66 45.0 4.70e-01 70.3% 96.4%
3227816 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.65 44.0 3.25e-01 70.3% 32.7%
3167601 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.65 45.0 4.44e-01 71.4% 90.5%
3225057 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 51.0 3.99e-01 84.6% 78.4%
3235669 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.64 48.0 4.33e-01 80.2% 98.4%
3211176 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.64 51.0 3.63e-01 84.6% 56.9%
4259150 295.1.1.46 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › WapI 0.63 52.0 4.54e-01 89.0% 97.0%
3265841 216.1.1.20 a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.63 43.0 4.24e-01 70.3% 86.0%
5011042 3692.1.1.0 a+b two layers › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain › Ornithine cyclodeaminase-like enzymes dimerization domain 0.63 48.0 4.28e-01 81.3% 69.2%
3228574 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.63 50.0 3.58e-01 84.6% 56.7%
3227136 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 49.0 3.72e-01 83.5% 74.8%
3229102 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.62 48.0 3.48e-01 82.4% 66.4%
3838919 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.62 54.0 4.66e-01 94.5% 90.0%
3611079 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.61 46.0 3.42e-01 78.0% 90.4%
3212555 2484.1.1.200 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › FTH 0.61 48.0 4.21e-01 82.4% 95.4%
3212404 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.61 50.0 3.59e-01 87.9% 56.5%
5078256 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.61 53.0 4.19e-01 97.8% 93.3%
4997629 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.61 54.0 4.27e-01 98.9% 96.2%
3242542 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 48.0 3.42e-01 83.5% 52.5%
3247669 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 49.0 3.56e-01 89.0% 56.8%
3992641 331.4.1.9 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C 0.60 38.0 4.30e-01 70.3% 82.9%
4927792 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.60 53.0 3.61e-01 97.8% 54.7%
3604518 3111.1.1.0 beta barrels › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain › STT3/PglB/AglB beta-barrel domain 0.60 46.0 4.48e-01 80.2% 88.0%
4958164 298.1.1.42 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA 0.60 52.0 3.63e-01 96.7% 59.0%
3218627 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.60 46.0 3.55e-01 83.5% 65.6%
3389900 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.60 46.0 3.56e-01 80.2% 86.3%
3584527 216.1.1.9 a+b two layers › UBC-like › UBC-like › UBC-like › FANCL_d2 0.60 41.0 3.84e-01 71.4% 59.1%
4934604 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.59 52.0 3.59e-01 97.8% 57.5%
4956654 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.59 52.0 4.09e-01 97.8% 95.4%
4986395 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.59 50.0 4.01e-01 96.7% 92.3%
3586315 719.1.1.0 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain 0.59 44.0 3.91e-01 80.2% 99.3%
3511755 10.1.1.1 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.59 45.0 3.59e-01 81.3% 90.6%
3485291 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.59 45.0 3.46e-01 82.4% 89.8%
3507127 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 44.0 3.43e-01 79.1% 85.1%
3737540 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 48.0 4.02e-01 89.0% 81.3%
4256135 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.58 46.0 3.66e-01 85.7% 86.3%
3212409 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 40.0 3.40e-01 71.4% 77.9%
4945847 298.1.1.0 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 0.58 51.0 4.20e-01 97.8% 95.2%
3231485 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.58 47.0 3.90e-01 87.9% 79.4%
2557239 223.2.1.17 a+b three layers › Profilin-like › profilin-like › profilin-like › SLM4 0.58 39.0 3.43e-01 71.4% 74.0%
3405634 10.1.1.1 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_1 0.56 44.0 3.55e-01 84.6% 90.0%
3239249 207.1.1.81 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH 0.56 42.0 3.13e-01 82.4% 67.8%
3510230 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.55 42.0 3.34e-01 81.3% 84.9%
5063899 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.54 41.0 3.14e-01 83.5% 53.2%
4890983 6110.1.1.0 alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain 0.53 43.0 2.77e-01 89.0% 30.5%
3926363 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 46.0 4.28e-01 97.8% 87.0%
3640668 719.1.1.2 beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF 0.51 37.0 3.37e-01 75.8% 61.6%
4998264 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.51 36.0 3.78e-01 73.6% 83.5%
4069893 227.1.1.7 a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 0.51 38.0 3.40e-01 76.9% 81.6%