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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00733

Bact-Vir

Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00733

Identity

Kingdom:
phage

Quality

86.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-76
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03860.22 best Csp 20.6 5.50e-04 73.7% 47.2%
CATH (75)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7c1iA01 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.90 72.0 6.49e-01 100.0% 64.0%
3ro3A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.90 66.0 5.00e-01 94.7% 36.5%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.89 63.0 5.19e-01 72.4% 46.8%
4i1aA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.89 66.0 4.36e-01 97.4% 21.5%
8fbnB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.89 81.0 5.67e-01 98.7% 43.7%
1elrA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.88 63.0 5.16e-01 90.8% 43.8%
1x8zB00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.88 81.0 6.41e-01 100.0% 53.1%
1sr2A00 1.20.120.160 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain 0.87 70.0 5.94e-01 100.0% 55.2%
4yvoA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.87 64.0 5.40e-01 93.4% 48.7%
4lctB00 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.87 68.0 4.25e-01 100.0% 17.8%
3gw4A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.87 66.0 4.75e-01 98.7% 31.2%
1h6gA02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.87 80.0 6.73e-01 100.0% 71.0%
1rj1A00 1.20.140.40 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Invertase/pectin methylesterase inhibitor family protein 0.87 81.0 6.35e-01 100.0% 51.4%
2oo2A00 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.87 56.0 5.62e-01 75.0% 65.8%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.87 79.0 5.78e-01 100.0% 40.4%
2crbA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.86 73.0 6.70e-01 97.4% 72.2%
2rpaA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.85 72.0 7.19e-01 98.7% 89.6%
2y4tB01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.85 65.0 4.12e-01 100.0% 18.3%
3iqcA00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.85 77.0 6.51e-01 97.4% 65.5%
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.85 75.0 6.73e-01 98.7% 69.9%
3hiuD00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.84 78.0 6.05e-01 100.0% 88.8%
2fo7A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.84 53.0 4.28e-01 90.8% 36.0%
6fdpA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.83 54.0 4.61e-01 93.4% 42.5%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.83 73.0 7.41e-01 100.0% 97.3%
3u8vA00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.83 65.0 6.31e-01 98.7% 75.9%
1lkoA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.83 76.0 6.04e-01 100.0% 91.7%
2qqyA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.83 76.0 6.14e-01 100.0% 96.4%
4gywA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.83 52.0 4.65e-01 90.8% 46.7%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.83 75.0 6.18e-01 100.0% 62.4%
1yxrA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.82 70.0 7.12e-01 93.4% 94.6%
1a17A00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 56.0 4.36e-01 97.4% 34.0%
1ihgA02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 66.0 5.25e-01 90.8% 44.8%
5djsA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.82 55.0 4.36e-01 93.4% 36.4%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.82 76.0 5.85e-01 100.0% 92.4%
2c41C01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.82 74.0 5.89e-01 100.0% 94.0%
1jgcA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.82 74.0 5.75e-01 100.0% 83.1%
4j8dD00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 56.0 4.30e-01 97.4% 33.3%
1tjoB00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.81 73.0 5.57e-01 100.0% 81.7%
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.81 74.0 5.86e-01 100.0% 95.3%
4xi0F00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 55.0 4.15e-01 100.0% 30.3%
2fbnA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 65.0 5.08e-01 90.8% 42.5%
3vtxB00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.81 57.0 4.23e-01 100.0% 30.6%
4qndA00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.80 54.0 4.97e-01 71.1% 54.6%
1zs3A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.80 73.0 5.55e-01 100.0% 88.3%
3kwoA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.80 73.0 5.77e-01 100.0% 93.3%
2yfaA02 1.20.1440.210 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.80 72.0 6.22e-01 100.0% 66.4%
3iq1B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.80 72.0 5.63e-01 100.0% 88.7%
6xssA01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 51.0 5.33e-01 90.8% 71.0%
4xpwA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.80 71.0 5.96e-01 100.0% 65.6%
2vyiA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.80 55.0 4.54e-01 100.0% 42.2%
5fzsA00 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.79 50.0 4.44e-01 90.8% 45.8%
1j5wA02 1.20.58.180 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Class II aaRS and biotin synthetases; domain 2 0.78 65.0 6.54e-01 97.4% 89.6%
3as5A01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.78 50.0 3.78e-01 93.4% 28.1%
1wfdA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.78 66.0 6.15e-01 94.7% 75.3%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.77 57.0 5.40e-01 85.5% 66.7%
3zsuA00 1.20.120.290 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle 0.76 68.0 5.87e-01 100.0% 67.8%
1a7eA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.76 68.0 5.88e-01 100.0% 64.4%
1j30A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.75 64.0 5.07e-01 89.5% 83.7%
2l3lA01 1.20.58.1250 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Tubulin Binding Cofactor C, N-terminal domain 0.75 63.0 5.70e-01 100.0% 67.9%
3uo2B02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.74 60.0 5.80e-01 85.5% 84.5%
1fewA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.73 64.0 4.99e-01 100.0% 71.7%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.73 65.0 5.52e-01 100.0% 65.6%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.72 50.0 4.12e-01 71.1% 41.4%
2a9uA01 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.72 65.0 5.45e-01 98.7% 61.9%
2fzfA01 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.72 62.0 5.09e-01 100.0% 92.7%
1rqgA04 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.71 63.0 5.05e-01 100.0% 55.6%
3zheD01 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.70 60.0 4.40e-01 96.1% 67.8%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.70 59.0 5.64e-01 97.4% 87.9%
8amzP01 1.25.40.570 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.69 64.0 3.98e-01 98.7% 27.5%
1r2jA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.68 58.0 4.73e-01 94.7% 55.6%
3l1nA02 1.20.1280.140 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.68 56.0 5.38e-01 88.2% 87.4%
2v5cA03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.67 61.0 5.04e-01 97.4% 61.5%
3gonA02 3.30.70.890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain 0.66 62.0 5.03e-01 100.0% 61.9%
2ra1A03 1.20.58.770 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 52.0 5.64e-01 94.7% 100.0%
2lqgA00 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.65 55.0 4.68e-01 100.0% 79.0%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5013248 601.3.1.1 alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain › Hpt 0.92 85.0 6.99e-01 97.4% 61.6%
3558834 604.12.1.6 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › NRBF2_MIT 0.92 78.0 7.31e-01 93.4% 75.6%
5077935 109.4.1.5 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 0.92 86.0 5.96e-01 100.0% 40.4%
3783832 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.92 86.0 6.79e-01 100.0% 60.8%
5022166 109.4.1.922 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_9 0.91 86.0 5.64e-01 100.0% 27.6%
3425574 109.4.1.195 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 0.90 64.0 4.38e-01 100.0% 23.8%
3743018 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.90 73.0 7.85e-01 90.8% 100.0%
3824159 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.90 84.0 6.33e-01 100.0% 57.0%
5076762 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.90 79.0 6.44e-01 94.7% 54.6%
3357886 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.90 83.0 6.13e-01 100.0% 51.7%
3833909 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.89 83.0 6.68e-01 100.0% 60.1%
4996108 109.4.1.218 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SNAP 0.89 76.0 5.50e-01 93.4% 35.8%
3805579 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.89 63.0 5.09e-01 100.0% 41.8%
4957516 150.1.1.3 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin 0.88 64.0 5.27e-01 75.0% 46.8%
3995816 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.88 77.0 7.44e-01 100.0% 84.7%
5078844 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.87 74.0 7.34e-01 94.7% 86.3%
3309583 604.12.1.65 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.87 80.0 7.88e-01 100.0% 100.0%
5055769 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.87 75.0 7.43e-01 93.4% 96.2%
3621936 109.4.1.1809 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2, TPR_8, TPR_19 0.86 61.0 4.96e-01 100.0% 41.5%
5045256 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.86 80.0 7.35e-01 100.0% 91.6%
3273310 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.86 76.0 6.76e-01 98.7% 68.6%
4947260 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.86 74.0 7.31e-01 96.1% 87.5%
3700063 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.86 69.0 3.97e-01 84.2% 20.2%
3450864 633.4.1.1 alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI 0.86 80.0 6.24e-01 100.0% 60.7%
4881515 3684.1.1.0 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like 0.86 78.0 6.54e-01 100.0% 65.9%
3727929 109.4.1.1300 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_16, TPR_19 0.86 62.0 3.98e-01 100.0% 18.7%
3682397 604.12.1.65 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT_ATG1 0.85 78.0 7.08e-01 98.7% 77.6%
3816396 3543.1.1.4 alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 0.85 73.0 5.03e-01 92.1% 40.4%
4959388 109.4.1.195 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_11 0.85 60.0 4.02e-01 98.7% 22.0%
3252144 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.85 71.0 7.40e-01 96.1% 98.6%
3708191 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.85 71.0 7.14e-01 93.4% 90.7%
5032368 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.84 68.0 7.24e-01 89.5% 100.0%
3697637 109.4.1.1978 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_2, ANAPC3, TPR_8, TPR_16, PF29407 0.84 61.0 3.59e-01 100.0% 11.1%
5062478 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.84 77.0 7.29e-01 100.0% 84.4%
3598711 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.84 75.0 4.28e-01 100.0% 10.3%
4939273 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.84 72.0 7.47e-01 96.1% 100.0%
4999686 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.84 74.0 7.44e-01 98.7% 97.3%
5057382 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.83 65.0 4.55e-01 100.0% 28.8%
5078340 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.83 75.0 7.07e-01 98.7% 83.3%
165995 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.83 73.0 7.41e-01 100.0% 97.3%
4024450 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.83 76.0 5.68e-01 100.0% 60.6%
4933335 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.83 71.0 6.98e-01 94.7% 87.5%
3490166 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.83 72.0 4.12e-01 93.4% 14.5%
4823654 109.4.1.2438 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1, TPR_7, TPR_8, TPR_12 0.83 64.0 4.65e-01 94.7% 32.0%
4929706 604.12.1.1 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › MIT 0.83 70.0 7.29e-01 96.1% 100.0%
4941278 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.82 53.0 4.21e-01 92.1% 34.5%
3512514 109.4.1.1286 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.82 75.0 4.98e-01 100.0% 26.6%
4624230 109.4.1.192 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8 0.82 55.0 4.42e-01 90.8% 37.9%
3752941 109.4.1.1286 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8, TPR_12 0.82 56.0 4.63e-01 92.1% 41.5%
3614952 109.4.1.1287 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_6, TPR_8, TPR_16 0.81 74.0 4.27e-01 100.0% 11.5%
3972286 109.4.1.0 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.81 64.0 4.48e-01 84.2% 28.6%
3531822 109.4.1.198 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_12 0.81 56.0 4.25e-01 92.1% 32.7%
4965788 150.1.1.1 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Ferritin 0.80 74.0 5.95e-01 100.0% 97.9%
4104119 604.12.1.9 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › ATG1-like_MIT2 0.80 70.0 6.68e-01 97.4% 88.6%
3707192 109.4.1.202 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_16 0.79 56.0 3.93e-01 100.0% 25.5%
3693073 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.77 69.0 6.44e-01 100.0% 82.1%
4325839 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.77 65.0 6.70e-01 100.0% 100.0%
4936083 5073.1.2.24 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Copper efflux ATPase transmembrane domain › Exosortase_EpsH 0.76 66.0 4.55e-01 93.4% 32.5%
4099493 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.76 63.0 5.85e-01 89.5% 74.7%
3252261 109.4.1.98 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.76 58.0 3.76e-01 80.3% 35.2%
5075967 3281.1.1.1 alpha complex topology › Sodium/proton antiporter subunits-like › Sodium/proton antiporter subunits-like › NADH-quinone oxidoreductase subunit L (NuoL)-related › Proton_antipo_M 0.76 71.0 4.42e-01 100.0% 25.9%
4975050 3843.1.1.0 alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K 0.75 66.0 6.71e-01 98.7% 100.0%
4016845 622.1.1.1 alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C 0.74 60.0 5.62e-01 85.5% 78.9%
4450065 109.4.1.95 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_2 0.74 55.0 4.15e-01 100.0% 34.1%
3972329 633.5.1.0 alpha bundles › Bromodomain-like › LemA-like › LemA-like 0.73 65.0 5.08e-01 100.0% 48.5%
4007316 3291.1.1.4 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › PspA_IM30 0.71 64.0 5.01e-01 100.0% 91.6%
3425296 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.69 63.0 5.13e-01 97.4% 81.5%
3626316 174.1.1.0 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain 0.69 60.0 5.10e-01 100.0% 69.2%
3703991 109.4.1.1317 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Vps53_N, VPS53_C 0.68 61.0 3.53e-01 100.0% 23.1%
5013782 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.57 48.0 4.91e-01 100.0% 100.0%
D2 high residues 80-127
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03860.22 best Csp 24.5 3.40e-05 97.9% 41.7%
CATH (72)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2chpA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.91 82.0 5.62e-01 97.9% 38.5%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.90 81.0 6.97e-01 100.0% 65.8%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.89 78.0 6.98e-01 95.8% 73.8%
1orjD00 1.20.120.340 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS 0.88 80.0 5.77e-01 100.0% 39.2%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.88 77.0 4.62e-01 100.0% 15.2%
8b70A01 1.20.1740.10 Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I 0.87 77.0 4.42e-01 100.0% 11.5%
4rngC00 1.20.1280.290 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.86 71.0 5.90e-01 100.0% 53.0%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.86 77.0 5.94e-01 100.0% 53.4%
2e9xA01 1.20.58.1030 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.86 77.0 5.57e-01 100.0% 57.8%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.85 70.0 5.32e-01 100.0% 39.3%
6n7pX01 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.82 72.0 4.38e-01 100.0% 28.1%
3ehfD01 1.20.5.1930 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.82 70.0 6.43e-01 95.8% 90.5%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.82 66.0 6.47e-01 97.9% 82.7%
3fd9A03 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.81 71.0 6.21e-01 100.0% 69.9%
2cmrA00 1.20.58.1860 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 70.0 4.67e-01 100.0% 38.0%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.81 67.0 6.64e-01 100.0% 88.2%
2ic6A00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 70.0 6.20e-01 100.0% 91.5%
1aepA00 1.20.120.20 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein 0.80 68.0 4.78e-01 100.0% 30.7%
3tulB00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.80 68.0 4.99e-01 100.0% 64.7%
5jrcA00 1.20.58.2140 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 69.0 4.62e-01 100.0% 29.0%
3sjqC00 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.79 69.0 5.88e-01 100.0% 60.0%
1i4dA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.79 68.0 4.53e-01 100.0% 25.0%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.79 67.0 6.14e-01 100.0% 77.6%
4nqiD00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.79 68.0 4.36e-01 100.0% 20.7%
4k0dA00 1.20.120.1730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.79 67.0 4.85e-01 100.0% 33.6%
1vcsA00 1.20.58.400 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › t-snare proteins 0.78 66.0 5.27e-01 100.0% 47.1%
7xxiA01 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.78 65.0 4.03e-01 100.0% 15.9%
2a2cA03 1.20.1440.340 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.78 67.0 4.85e-01 100.0% 34.8%
1rv2D04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.77 65.0 5.89e-01 100.0% 82.9%
3unoE00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.77 61.0 4.27e-01 100.0% 26.3%
2hroA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.77 67.0 4.94e-01 100.0% 80.5%
2y1vA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.77 64.0 4.38e-01 100.0% 28.1%
3nymA00 6.10.290.10 Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.77 66.0 4.96e-01 100.0% 62.9%
1ku9A02 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.77 64.0 5.98e-01 100.0% 92.2%
1a36A04 1.10.132.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.76 64.0 4.41e-01 100.0% 27.4%
3eabE00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.76 61.0 5.20e-01 95.8% 65.1%
3h3mA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.76 61.0 5.05e-01 100.0% 49.4%
3i2wA01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.76 65.0 4.07e-01 100.0% 19.0%
4aflA00 6.10.140.1740 Special › Helix non-globular › Helix Hairpins › 0.76 63.0 4.95e-01 100.0% 44.1%
3o10C00 1.20.120.330 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 0.75 62.0 4.53e-01 100.0% 33.1%
1luwA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.75 63.0 5.82e-01 100.0% 76.6%
3txsC01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.75 63.0 5.51e-01 100.0% 62.7%
2yevA03 1.20.120.80 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle 0.75 62.0 4.28e-01 100.0% 29.3%
1x0tA01 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.75 62.0 5.79e-01 97.9% 73.8%
4e4eA01 1.10.287.990 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Fe,Mn superoxide dismutase (SOD) domain 0.75 62.0 5.62e-01 100.0% 69.0%
3b2eF00 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.74 61.0 5.73e-01 100.0% 88.7%
3rq9A00 1.10.287.2500 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.73 61.0 5.35e-01 100.0% 61.5%
7xrxB01 1.20.1420.20 Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › M75 peptidase, HXXE motif 0.73 60.0 3.60e-01 100.0% 12.4%
1kfdA02 1.20.1060.10 Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 0.73 60.0 5.46e-01 100.0% 67.6%
2rklF00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.73 52.0 5.13e-01 100.0% 73.1%
1fioA00 1.20.58.70 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.72 58.0 4.02e-01 100.0% 25.8%
2yb5F01 1.20.1280.250 Mainly Alpha › Up-down Bundle › Monooxygenase › 0.71 61.0 5.14e-01 100.0% 96.5%
4e6hA00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.71 61.0 3.44e-01 100.0% 10.5%
6c7lA02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.71 59.0 3.99e-01 97.9% 24.1%
3nkzA00 1.20.58.380 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. 0.70 59.0 4.84e-01 100.0% 60.8%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.70 57.0 4.66e-01 100.0% 68.6%
2gs4A00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.70 57.0 4.11e-01 100.0% 31.6%
3favD00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.69 58.0 5.09e-01 100.0% 100.0%
4agsB04 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.69 58.0 4.39e-01 100.0% 37.6%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.69 57.0 4.62e-01 100.0% 46.5%
1vh6A01 6.10.140.1940 Special › Helix non-globular › Helix Hairpins › 0.69 53.0 4.41e-01 91.7% 50.5%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.69 55.0 5.56e-01 100.0% 97.9%
3uo2B02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.68 56.0 4.83e-01 100.0% 56.0%
3iv7A02 1.20.1090.10 Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain 0.68 56.0 3.81e-01 100.0% 24.0%
3agtA00 1.20.120.50 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like 0.68 58.0 4.32e-01 100.0% 36.8%
4errB00 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.67 52.0 4.56e-01 95.8% 54.2%
3nrxA00 1.20.58.1520 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.66 53.0 4.12e-01 100.0% 39.0%
3l1nA01 6.10.140.790 Special › Helix non-globular › Helix Hairpins › 0.65 53.0 5.29e-01 100.0% 98.0%
2nr4A02 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.64 53.0 5.01e-01 95.8% 75.9%
6d5xA00 1.20.1200.10 Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like 0.63 50.0 3.75e-01 100.0% 72.2%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.61 51.0 4.35e-01 100.0% 60.0%
1nktA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.53 47.0 3.16e-01 100.0% 76.3%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4051951 605.2.1.0 alpha duplicates or obligate multimers › ROP-like › Hypothetical protein D-63 › Hypothetical protein D-63 0.92 84.0 6.68e-01 100.0% 53.3%
None 0.92 84.0 5.36e-01 100.0% 24.0%
4652719 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.91 82.0 6.46e-01 100.0% 50.5%
4048446 148.1.3.26 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 0.90 81.0 5.07e-01 100.0% 20.9%
4685 192.16.1.1 alpha bundles › Long alpha-hairpin › SPy1572-like › SPy1572-like › DUF1912 0.90 81.0 6.97e-01 100.0% 65.8%
3714029 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.89 80.0 5.25e-01 100.0% 27.4%
4017168 150.1.1.114 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF30036 0.88 80.0 5.44e-01 100.0% 31.2%
3180119 604.5.1.0 alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) 0.88 77.0 6.31e-01 100.0% 55.3%
4021739 192.10.1.7 alpha bundles › Long alpha-hairpin › DnaK suppressor protein DksA, alpha-hairpin domain › DnaK suppressor protein DksA, alpha-hairpin domain › HisKA 0.87 74.0 6.18e-01 100.0% 56.2%
4129922 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.87 78.0 6.07e-01 100.0% 48.0%
3764767 6155.1.1.2 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › PQ-loop 0.87 75.0 5.40e-01 100.0% 35.4%
4182090 148.1.3.26 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_9 0.87 78.0 4.96e-01 100.0% 22.3%
4602773 611.9.1.4 alpha bundles › N-cbl like › Resistance protein (Rx) N-terminal domain › Resistance protein (Rx) N-terminal domain › Rx_N 0.87 76.0 5.47e-01 100.0% 35.6%
4259085 3755.4.1.66 alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › MCPsignal 0.87 76.0 4.64e-01 100.0% 17.6%
3988700 5082.1.1.1 alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux 0.86 77.0 5.01e-01 100.0% 72.3%
5057549 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.86 75.0 5.60e-01 100.0% 39.8%
3901696 192.8.1.240 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › HR1 0.86 77.0 6.31e-01 100.0% 61.2%
3915989 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.85 76.0 4.13e-01 100.0% 6.0%
4984288 2004.1.1.85 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ArsA_ATPase 0.85 76.0 4.50e-01 100.0% 14.9%
4641084 4207.1.2.0 alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › MED7 hinge region 0.85 75.0 6.10e-01 100.0% 53.3%
3825615 2004.1.1.433 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_23 0.85 74.0 4.01e-01 100.0% 5.5%
4002015 4177.1.1.3 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › Arfaptin 0.85 73.0 4.65e-01 100.0% 20.9%
3410024 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 75.0 4.63e-01 100.0% 18.1%
4860885 633.6.1.6 alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACAD9-ACADV_C 0.84 75.0 5.77e-01 100.0% 45.7%
3760325 3291.1.1.50 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › FmiP_Thoc5 0.84 74.0 5.57e-01 100.0% 41.7%
5013384 101.1.2.135 alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.84 74.0 5.17e-01 100.0% 32.0%
3268700 632.1.1.0 alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.83 74.0 4.84e-01 100.0% 24.6%
4257759 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.83 73.0 5.97e-01 100.0% 53.3%
3827457 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.83 73.0 6.33e-01 100.0% 73.3%
4130981 192.6.1.0 alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.83 72.0 7.14e-01 100.0% 94.0%
3443358 109.3.1.31 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DUF4220 0.83 72.0 4.43e-01 100.0% 18.9%
3730904 650.1.1.14 alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › Med10 0.83 72.0 5.90e-01 100.0% 53.3%
3181201 3877.1.1.1 alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP 0.83 71.0 4.45e-01 93.8% 19.6%
3954540 3291.1.1.0 alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.82 71.0 5.48e-01 100.0% 69.1%
3944950 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.82 70.0 6.46e-01 100.0% 73.8%
3163896 605.1.1.0 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.82 72.0 4.65e-01 97.9% 22.4%
3663959 192.7.1.2 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.82 72.0 5.25e-01 100.0% 36.9%
3361164 3860.1.1.0 alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm 0.81 70.0 4.61e-01 100.0% 23.4%
3198603 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.81 70.0 4.82e-01 100.0% 35.2%
3504228 174.1.1.25 few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Mtp 0.81 71.0 5.23e-01 100.0% 38.4%
3494796 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.81 69.0 4.30e-01 100.0% 17.8%
3608014 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.81 70.0 6.11e-01 100.0% 64.0%
3833861 150.5.1.60 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like › DUF7865 0.81 71.0 5.88e-01 100.0% 56.5%
315449 192.8.1.2 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › Hanta_nucleocap 0.80 68.0 5.95e-01 100.0% 65.8%
3238399 109.4.1.1 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › 14-3-3 0.80 68.0 5.15e-01 100.0% 50.8%
3207548 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.80 69.0 4.98e-01 100.0% 34.3%
3716154 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.80 69.0 5.87e-01 100.0% 60.0%
3284609 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.79 69.0 5.77e-01 100.0% 67.1%
3432902 603.1.1.5 alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-6_N 0.79 67.0 5.16e-01 100.0% 41.7%
3215082 4177.1.1.0 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.79 68.0 4.98e-01 100.0% 35.6%
5038395 601.4.1.0 alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains 0.79 67.0 4.74e-01 100.0% 31.0%
3241687 603.1.1.0 alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.79 69.0 5.21e-01 100.0% 41.7%
4008034 223.1.1.113 a+b three layers › Profilin-like › sensor domains › sensor domains › PF30408 0.78 65.0 4.55e-01 100.0% 28.2%
3535521 1073.1.1.11 alpha arrays › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › Mitochondrial calcium uniporter (MCU) › WWC1 0.77 66.0 5.79e-01 100.0% 64.0%
3503444 192.8.1.0 alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.77 65.0 5.41e-01 100.0% 53.3%
3883526 4177.1.1.1 alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH 0.77 65.0 3.99e-01 100.0% 23.0%
4621241 304.58.1.0 a+b two layers › Alpha-beta plaits › FepE-like › FepE-like 0.75 63.0 4.14e-01 100.0% 23.7%
5069780 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.74 63.0 5.18e-01 100.0% 50.5%
3260370 6155.1.1.0 alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter 0.74 59.0 4.39e-01 100.0% 33.1%
4078998 5059.1.1.2 alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › Multi_Drug_Res 0.73 57.0 4.60e-01 100.0% 42.9%
5081365 601.33.1.0 alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain 0.73 61.0 4.48e-01 100.0% 33.1%
3229788 3470.1.1.0 extended segments › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain › Glycophorin-A transmembrane domain 0.72 60.0 5.70e-01 100.0% 93.3%
3980942 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.71 59.0 4.78e-01 97.9% 60.0%
3882466 192.7.1.0 alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.71 60.0 4.70e-01 100.0% 47.8%
5079565 5086.1.1.0 alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.70 58.0 4.04e-01 100.0% 27.4%
3271624 2004.1.1.184 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 0.68 54.0 3.20e-01 100.0% 10.8%
3712097 4970.1.1.0 alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I 0.68 55.0 4.68e-01 100.0% 57.8%
3573745 609.1.1.0 alpha bundles › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase › Domain of poly(ADP-ribose) polymerase 0.67 56.0 3.99e-01 100.0% 28.2%
4057957 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.67 54.0 4.09e-01 100.0% 34.3%
3387443 603.5.1.1 alpha bundles › STAT-like › FlgN-like › FlgN-like › FlgN 0.63 50.0 4.03e-01 100.0% 41.7%