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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00776
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00776
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 84-292
Domain cluster:
rep: IMGVR_UViG_3300021962_011364-3300021962-Ga0222713_100285162__D32-230
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF28492.1 best | Beta_helix_4 | 273.1 | 4.40e-81 | 100.0% | 61.8% |
D2
medium
residues 293-359
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF28492.1 best | Beta_helix_4 | 43.3 | 3.40e-11 | 100.0% | 19.1% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3pp8A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 42.0 | 3.24e-01 | 100.0% | 33.9% |
| 2oasA01 | 3.40.1080.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaconate Coenzyme A-transferase › Glutaconate Coenzyme A-transferase | 0.52 | 40.0 | 3.10e-01 | 100.0% | 33.7% |
| 3llmA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 40.0 | 2.86e-01 | 88.1% | 84.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4969216 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.80 | 67.0 | 4.28e-01 | 100.0% | 20.3% |
| 4970371 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.72 | 66.0 | 4.20e-01 | 100.0% | 24.7% |
| 3939229 | 389.6.1.0 ↗ | few secondary structure elements › EGF-like › Growth factor receptor domain › Growth factor receptor domain | 0.63 | 54.0 | 3.64e-01 | 100.0% | 50.9% |
| 5014813 | 2004.1.1.95 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF257 | 0.52 | 42.0 | 3.09e-01 | 97.0% | 56.4% |
| 3935057 | 2003.1.7.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NagB/RpiA/CoA transferase-like › AcetylCoA_hydro | 0.52 | 41.0 | 3.12e-01 | 100.0% | 33.5% |
| 4950947 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 38.0 | 2.95e-01 | 86.6% | 97.8% |
| 3166231 | 2003.1.1.51 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › DFP | 0.51 | 41.0 | 3.16e-01 | 100.0% | 62.1% |
| 5067062 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.50 | 42.0 | 3.23e-01 | 98.5% | 89.7% |
D3
medium
residues 360-426
Domain cluster:
representative