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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00796
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00796
Identity
- Kingdom:
- phage
Quality
60.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-109
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3mtuE00 | 1.20.5.400 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.81 | 71.0 | 6.52e-01 | 100.0% | 75.8% |
| 7dvqK01 | 1.25.10.10 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant | 0.74 | 52.0 | 3.54e-01 | 74.5% | 43.4% |
| 1vgpA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.74 | 54.0 | 4.28e-01 | 80.4% | 38.5% |
| 2p0tA02 | 1.10.60.30 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains | 0.73 | 53.0 | 4.68e-01 | 76.5% | 54.2% |
| 2qkwA00 | 1.20.1270.140 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AvrPto | 0.69 | 57.0 | 4.52e-01 | 90.2% | 47.5% |
| 2e5yA02 | 1.20.5.440 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › ATP synthase delta/epsilon subunit, C-terminal domain | 0.68 | 49.0 | 5.21e-01 | 76.5% | 86.7% |
| 4xaeB00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.66 | 48.0 | 2.97e-01 | 94.1% | 12.7% |
| 7lvzA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 45.0 | 2.99e-01 | 76.5% | 67.0% |
| 7ztbB01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.64 | 53.0 | 3.85e-01 | 100.0% | 31.3% |
| 1chuA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.62 | 42.0 | 2.73e-01 | 70.6% | 72.8% |
| 1xl7A01 | 1.10.275.20 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Choline/Carnitine o-acyltransferase | 0.56 | 41.0 | 3.26e-01 | 84.3% | 37.9% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3376917 | 192.24.1.8 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain › CDK5RAP3 | 0.94 | 65.0 | 5.46e-01 | 72.5% | 46.3% |
| 3482665 | 611.3.1.0 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.90 | 70.0 | 5.77e-01 | 82.4% | 49.4% |
| 3679557 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.84 | 66.0 | 5.48e-01 | 92.2% | 50.6% |
| 3865185 | 611.3.1.1 ↗ | alpha bundles › N-cbl like › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 › Med26 | 0.82 | 65.0 | 5.18e-01 | 84.3% | 45.3% |
| 4481861 | 150.8.1.5 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › PPE › PPE › EspA_EspE | 0.81 | 73.0 | 4.72e-01 | 98.0% | 41.0% |
| 3597604 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.80 | 72.0 | 4.74e-01 | 100.0% | 25.5% |
| 4305528 | 109.4.1.222 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DCB | 0.72 | 61.0 | 4.04e-01 | 100.0% | 23.2% |
| 3414050 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.70 | 60.0 | 4.84e-01 | 100.0% | 48.6% |
| 3711370 | 3004.1.1.0 ↗ | alpha bundles › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain › Hypothetical protein YfhH, N-terminal domain | 0.68 | 51.0 | 5.40e-01 | 86.3% | 93.3% |
| 4341419 | 4125.1.1.2 ↗ | alpha superhelices › BH3980-like › BH3980-like › BH3980-like › HAAS | 0.67 | 50.0 | 4.49e-01 | 80.4% | 61.4% |
| 4826095 | 5067.1.1.5 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Sterol-sensing | 0.66 | 57.0 | 4.76e-01 | 100.0% | 58.1% |
| 5045838 | 4163.1.1.1 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF1 N-terminal domain-like › Sld5 | 0.65 | 53.0 | 4.23e-01 | 100.0% | 43.6% |
| 4126919 | 2004.1.1.101 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB | 0.65 | 47.0 | 2.96e-01 | 82.4% | 14.9% |