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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00801
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00801
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 44-95
Domain cluster:
representative
CATH (75)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.81 | 59.0 | 3.55e-01 | 76.9% | 14.4% |
| 7bwcA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.79 | 56.0 | 3.39e-01 | 75.0% | 14.9% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.77 | 52.0 | 4.27e-01 | 71.2% | 37.8% |
| 4gafB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.75 | 52.0 | 4.07e-01 | 73.1% | 67.9% |
| 1ni9A01 | 3.30.540.10 | Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 | 0.75 | 52.0 | 3.70e-01 | 73.1% | 94.0% |
| 2qm4A01 | 2.170.210.10 | Mainly Beta › Beta Complex › Dna Repair Protein Xrcc4; Chain: A, domain 1 › DNA double-strand break repair and VJ recombination XRCC4, N-terminal | 0.74 | 51.0 | 3.72e-01 | 73.1% | 69.2% |
| 4kc3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.74 | 52.0 | 4.18e-01 | 73.1% | 70.5% |
| 3o4oC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.73 | 50.0 | 3.94e-01 | 71.2% | 67.3% |
| 3wasA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.72 | 58.0 | 3.47e-01 | 90.4% | 85.3% |
| 1bebA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.71 | 62.0 | 4.44e-01 | 100.0% | 52.6% |
| 2ra6C00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.71 | 61.0 | 4.50e-01 | 100.0% | 55.9% |
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 49.0 | 4.38e-01 | 75.0% | 65.8% |
| 3wmyA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.70 | 57.0 | 3.51e-01 | 88.5% | 15.9% |
| 1ko2A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.69 | 59.0 | 3.79e-01 | 94.2% | 48.3% |
| 1oxxK02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 54.0 | 5.70e-01 | 94.2% | 100.0% |
| 2awnC03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 58.0 | 5.60e-01 | 98.1% | 84.5% |
| 3p0cA00 | 3.30.1520.10 | Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain | 0.69 | 57.0 | 4.46e-01 | 92.3% | 73.9% |
| 4oddA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.68 | 58.0 | 4.29e-01 | 100.0% | 57.7% |
| 1m2xA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.68 | 56.0 | 3.69e-01 | 92.3% | 48.9% |
| 1v43A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 56.0 | 5.27e-01 | 98.1% | 75.0% |
| 1vwxT01 | 2.30.30.70 | Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 | 0.68 | 49.0 | 4.06e-01 | 78.8% | 87.6% |
| 4ao8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.68 | 57.0 | 3.68e-01 | 94.2% | 62.4% |
| 1e5pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.67 | 56.0 | 4.16e-01 | 100.0% | 59.1% |
| 2el8A01 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 51.0 | 4.34e-01 | 86.5% | 70.3% |
| 4wfvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 55.0 | 4.08e-01 | 100.0% | 56.9% |
| 2pmaA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.66 | 57.0 | 4.40e-01 | 100.0% | 68.6% |
| 3l4rA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.66 | 55.0 | 4.08e-01 | 100.0% | 54.3% |
| 1luiA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 53.0 | 4.24e-01 | 92.3% | 64.8% |
| 4u13A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 46.0 | 3.67e-01 | 75.0% | 79.8% |
| 1zc3B00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 48.0 | 3.84e-01 | 80.8% | 66.1% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.65 | 57.0 | 4.75e-01 | 100.0% | 90.2% |
| 3f40A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 45.0 | 3.50e-01 | 73.1% | 37.8% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.64 | 44.0 | 3.99e-01 | 88.5% | 54.4% |
| 5gqoA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 51.0 | 4.18e-01 | 88.5% | 86.6% |
| 1d5aA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.64 | 50.0 | 3.70e-01 | 90.4% | 82.1% |
| 2be3B01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.63 | 43.0 | 3.24e-01 | 71.2% | 83.7% |
| 2fggA01 | 3.30.160.240 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Rv1738 | 0.62 | 48.0 | 4.27e-01 | 84.6% | 72.0% |
| 3a57A00 | 2.60.270.30 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin | 0.62 | 48.0 | 3.54e-01 | 88.5% | 31.8% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.62 | 54.0 | 4.17e-01 | 100.0% | 80.2% |
| 7pkwA01 | 3.10.450.540 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 43.0 | 3.51e-01 | 73.1% | 65.0% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 43.0 | 3.42e-01 | 75.0% | 71.4% |
| 1lkeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.61 | 51.0 | 3.75e-01 | 100.0% | 56.7% |
| 1y0gA00 | 2.40.128.110 | Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like | 0.61 | 52.0 | 3.64e-01 | 96.2% | 77.5% |
| 2k4vA00 | 3.30.160.370 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Domain of unknown function DUF5064 | 0.61 | 47.0 | 3.60e-01 | 84.6% | 40.0% |
| 3ecrB03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.61 | 50.0 | 4.04e-01 | 92.3% | 70.6% |
| 1kyfA01 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.60 | 47.0 | 3.54e-01 | 84.6% | 76.9% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.60 | 41.0 | 3.12e-01 | 71.2% | 58.9% |
| 4blqA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 43.0 | 2.76e-01 | 75.0% | 64.8% |
| 2ovrB02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.60 | 48.0 | 2.94e-01 | 90.4% | 94.4% |
| 4ntqB00 | 3.30.2450.20 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.60 | 48.0 | 3.62e-01 | 96.2% | 74.5% |
| 3tqmA00 | 3.30.160.100 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like | 0.59 | 51.0 | 4.26e-01 | 96.2% | 63.3% |
| 3dmcA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 40.0 | 3.05e-01 | 71.2% | 70.9% |
| 2oc3A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.58 | 50.0 | 3.15e-01 | 98.1% | 44.1% |
| 1lf7A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 47.0 | 3.52e-01 | 100.0% | 49.4% |
| 2dmyA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.57 | 48.0 | 3.89e-01 | 92.3% | 59.8% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.57 | 47.0 | 3.87e-01 | 96.2% | 73.6% |
| 4ge6A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 49.0 | 3.04e-01 | 98.1% | 44.2% |
| 1j0wB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 42.0 | 3.50e-01 | 84.6% | 62.1% |
| 2v73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 43.0 | 3.03e-01 | 86.5% | 35.5% |
| 1zc0A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 48.0 | 3.02e-01 | 98.1% | 39.9% |
| 2giaA00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.56 | 42.0 | 3.23e-01 | 92.3% | 57.1% |
| 3qcmA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 48.0 | 3.04e-01 | 98.1% | 42.0% |
| 4s2rQ03 | 3.90.230.10 | Alpha Beta › Alpha-Beta Complex › Creatine Amidinohydrolase › Creatinase/methionine aminopeptidase superfamily | 0.56 | 46.0 | 2.93e-01 | 98.1% | 55.9% |
| 4ikcA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 47.0 | 3.01e-01 | 98.1% | 41.2% |
| 2l33A00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 44.0 | 3.66e-01 | 90.4% | 50.5% |
| 3htyA00 | 2.40.128.280 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 45.0 | 3.76e-01 | 94.2% | 81.9% |
| 4perB00 | 3.10.130.10 | Alpha Beta › Roll › P-30 Protein › Ribonuclease A-like domain | 0.54 | 40.0 | 3.32e-01 | 84.6% | 63.3% |
| 4qunA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 45.0 | 2.88e-01 | 98.1% | 43.5% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.52 | 37.0 | 2.64e-01 | 76.9% | 86.6% |
| 4lgvD02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.52 | 38.0 | 2.54e-01 | 84.6% | 58.5% |
| 3oksA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.51 | 41.0 | 2.93e-01 | 92.3% | 44.9% |
| 2it9A00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.51 | 38.0 | 3.07e-01 | 88.5% | 71.7% |
| 3lidA03 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.50 | 40.0 | 3.47e-01 | 100.0% | 86.5% |
| 3h6qA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.50 | 40.0 | 2.81e-01 | 88.5% | 56.0% |
| 1wgoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 37.0 | 3.18e-01 | 84.6% | 84.8% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3960593 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.87 | 65.0 | 4.68e-01 | 80.8% | 30.4% |
| 3955541 | 2003.1.2.155 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_7 | 0.85 | 65.0 | 4.65e-01 | 80.8% | 57.8% |
| 5020997 | 2003.1.2.24 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 | 0.85 | 63.0 | 4.26e-01 | 78.8% | 23.4% |
| 3192949 | 2003.1.2.49 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2+FAD_binding_3 | 0.82 | 64.0 | 3.86e-01 | 84.6% | 14.9% |
| 3699565 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.76 | 53.0 | 3.05e-01 | 73.1% | 16.4% |
| 3935357 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.75 | 58.0 | 4.44e-01 | 84.6% | 46.7% |
| 3896484 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.75 | 58.0 | 4.44e-01 | 84.6% | 47.5% |
| 4403166 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.74 | 61.0 | 5.66e-01 | 92.3% | 86.2% |
| 4153968 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.73 | 63.0 | 5.02e-01 | 98.1% | 51.4% |
| 3881671 | 719.1.1.2 ↗ | beta barrels › XRCC4, N-terminal domain-like › XRCC4, N-terminal domain › XRCC4, N-terminal domain › XLF | 0.72 | 50.0 | 3.82e-01 | 73.1% | 83.3% |
| 4165306 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.72 | 63.0 | 4.98e-01 | 98.1% | 53.3% |
| 3765454 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.72 | 57.0 | 4.22e-01 | 86.5% | 50.0% |
| 4660580 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.72 | 62.0 | 4.76e-01 | 96.2% | 46.1% |
| 4095892 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.72 | 60.0 | 4.45e-01 | 96.2% | 37.1% |
| 4990980 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.72 | 50.0 | 4.05e-01 | 73.1% | 52.6% |
| 4507276 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.71 | 60.0 | 4.81e-01 | 98.1% | 50.0% |
| 4278259 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.70 | 61.0 | 4.65e-01 | 100.0% | 41.6% |
| 3476018 | 220.1.1.155 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF26658 | 0.70 | 53.0 | 4.12e-01 | 84.6% | 45.5% |
| 3602995 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.70 | 60.0 | 4.58e-01 | 94.2% | 81.7% |
| 5083405 | 5.1.2.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_130 | 0.70 | 54.0 | 3.18e-01 | 88.5% | 10.7% |
| 1509336 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.70 | 60.0 | 5.38e-01 | 100.0% | 69.9% |
| 4085451 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.69 | 59.0 | 4.68e-01 | 98.1% | 50.0% |
| 5016233 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 59.0 | 4.60e-01 | 94.2% | 86.1% |
| 4930329 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 56.0 | 5.72e-01 | 94.2% | 94.0% |
| 4400596 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.69 | 53.0 | 3.74e-01 | 82.7% | 40.0% |
| 4086268 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.69 | 60.0 | 5.02e-01 | 98.1% | 62.2% |
| 3287996 | 243.1.1.80 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26580 | 0.69 | 48.0 | 3.89e-01 | 75.0% | 73.3% |
| 3721364 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.69 | 61.0 | 4.70e-01 | 100.0% | 65.2% |
| 3946156 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.69 | 60.0 | 4.69e-01 | 100.0% | 45.2% |
| 4444537 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.69 | 58.0 | 4.62e-01 | 98.1% | 45.9% |
| 4076380 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 58.0 | 5.61e-01 | 96.2% | 91.7% |
| 3821287 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.69 | 53.0 | 3.86e-01 | 82.7% | 45.0% |
| 4239330 | 2.4.1.3 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2,OB_MalK | 0.68 | 59.0 | 4.52e-01 | 100.0% | 41.6% |
| 3729702 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.68 | 55.0 | 3.29e-01 | 90.4% | 14.5% |
| 4449665 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.68 | 58.0 | 4.16e-01 | 100.0% | 50.0% |
| 3763572 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.68 | 57.0 | 4.20e-01 | 100.0% | 49.0% |
| 4436471 | 2.4.1.0 ↗ | beta barrels › OB-fold › MOP-like › MOP-like | 0.68 | 58.0 | 4.67e-01 | 98.1% | 49.5% |
| 5071787 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.67 | 59.0 | 4.40e-01 | 98.1% | 43.8% |
| 4325086 | 2.4.1.11 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3 | 0.67 | 58.0 | 4.66e-01 | 98.1% | 50.5% |
| 5026289 | 2.4.1.7 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK | 0.67 | 58.0 | 4.43e-01 | 100.0% | 42.4% |
| 3867539 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.67 | 47.0 | 3.12e-01 | 76.9% | 56.1% |
| 3636596 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 55.0 | 5.58e-01 | 92.3% | 94.0% |
| 4272564 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.66 | 51.0 | 4.07e-01 | 82.7% | 58.3% |
| 3248060 | 220.1.1.132 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C | 0.66 | 51.0 | 4.06e-01 | 86.5% | 50.9% |
| 4426764 | 2.4.1.12 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_3+CysA_C_terminal | 0.66 | 56.0 | 4.54e-01 | 98.1% | 50.5% |
| 4668960 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 51.0 | 4.03e-01 | 84.6% | 60.0% |
| 5024203 | 330.10.1.0 ↗ | a+b two layers › dsRBD-like › Heterocyclase TruD C-terminal domain › Heterocyclase TruD C-terminal domain | 0.66 | 54.0 | 4.54e-01 | 92.3% | 62.2% |
| 5050683 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.65 | 52.0 | 3.97e-01 | 90.4% | 64.0% |
| 4027391 | 10.1.1.114 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF29973 | 0.65 | 49.0 | 3.92e-01 | 82.7% | 66.7% |
| 5027014 | 246.2.1.9 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos_2 | 0.64 | 44.0 | 3.04e-01 | 73.1% | 35.1% |
| 3497120 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.64 | 54.0 | 4.46e-01 | 96.2% | 66.3% |
| 4938033 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.64 | 50.0 | 4.05e-01 | 90.4% | 53.2% |
| 4124004 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.64 | 53.0 | 5.04e-01 | 98.1% | 95.4% |
| 4961746 | 304.8.1.122 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DmsR_N | 0.64 | 51.0 | 4.07e-01 | 92.3% | 55.7% |
| 2801086 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.64 | 50.0 | 3.09e-01 | 90.4% | 34.4% |
| 5056110 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.63 | 48.0 | 3.73e-01 | 90.4% | 59.3% |
| 3238997 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.63 | 46.0 | 3.58e-01 | 84.6% | 75.9% |
| 3730011 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.62 | 52.0 | 3.80e-01 | 92.3% | 62.1% |
| 3655368 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.62 | 52.0 | 4.66e-01 | 96.2% | 80.0% |
| 5011583 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.62 | 48.0 | 3.30e-01 | 86.5% | 44.7% |
| 3960733 | 330.8.1.1 ↗ | a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like | 0.61 | 50.0 | 4.23e-01 | 88.5% | 63.5% |
| 3436093 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 52.0 | 4.62e-01 | 96.2% | 81.3% |
| 4245955 | 330.6.1.1 ↗ | a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer | 0.61 | 51.0 | 3.90e-01 | 96.2% | 45.4% |
| 4359254 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.61 | 48.0 | 4.36e-01 | 90.4% | 77.3% |
| 3420092 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.61 | 51.0 | 4.48e-01 | 96.2% | 75.0% |
| 5047395 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.61 | 52.0 | 4.07e-01 | 96.2% | 86.4% |
| 4932472 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.61 | 47.0 | 4.02e-01 | 90.4% | 78.9% |
| 3998221 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.60 | 47.0 | 3.53e-01 | 90.4% | 60.7% |
| 3507995 | 2004.1.1.156 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 | 0.60 | 50.0 | 3.39e-01 | 96.2% | 87.4% |
| 3628210 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.60 | 47.0 | 4.13e-01 | 90.4% | 90.6% |
| 4026008 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.60 | 50.0 | 4.32e-01 | 96.2% | 70.6% |
| 5018457 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 48.0 | 4.43e-01 | 92.3% | 95.7% |
| 4955080 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 44.0 | 3.81e-01 | 88.5% | 63.2% |
| 3951937 | 330.8.1.1 ↗ | a+b two layers › dsRBD-like › Rv2632c-like › Rv2632c-like › Rv2632c-like | 0.59 | 48.0 | 4.01e-01 | 88.5% | 60.7% |
| 4498611 | 2484.1.1.43 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Endonuclease_5 | 0.59 | 45.0 | 3.15e-01 | 86.5% | 44.2% |
| 3809302 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 51.0 | 4.40e-01 | 100.0% | 90.6% |
| 3616263 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.59 | 46.0 | 3.82e-01 | 90.4% | 85.0% |
| 4336488 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 46.0 | 4.29e-01 | 90.4% | 82.9% |
| 3601883 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 42.0 | 3.30e-01 | 76.9% | 39.2% |
| 4646686 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.58 | 45.0 | 4.18e-01 | 90.4% | 77.1% |
| 4941364 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.57 | 47.0 | 3.81e-01 | 94.2% | 54.3% |
| 3304346 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 47.0 | 4.34e-01 | 96.2% | 88.6% |
| 4997067 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.57 | 49.0 | 3.94e-01 | 98.1% | 89.5% |
| 3314422 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 45.0 | 4.21e-01 | 94.2% | 87.1% |
| 1281147 | 9.23.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_3 | 0.57 | 46.0 | 3.86e-01 | 94.2% | 81.9% |
| 3603448 | 3291.1.1.49 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › NFACT_N | 0.56 | 44.0 | 3.31e-01 | 100.0% | 60.0% |
| 5028953 | 330.2.1.0 ↗ | a+b two layers › dsRBD-like › Ribosome binding protein Y (YfiA homologue) › Ribosome binding protein Y (YfiA homologue) | 0.56 | 45.0 | 3.85e-01 | 92.3% | 64.4% |
| 3212053 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.54 | 46.0 | 2.87e-01 | 98.1% | 48.8% |
| 4179619 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.54 | 41.0 | 3.35e-01 | 100.0% | 72.6% |
| 3540675 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.54 | 45.0 | 2.80e-01 | 98.1% | 36.4% |
D2
high
residues 143-204
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dd9A02 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.60 | 41.0 | 2.75e-01 | 72.6% | 93.8% |
| 5cr4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 49.0 | 3.35e-01 | 91.9% | 72.8% |
| 2imrA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 47.0 | 4.58e-01 | 93.5% | 95.7% |
| 6jhpA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.55 | 37.0 | 2.47e-01 | 71.0% | 97.0% |
| 3griB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 48.0 | 3.96e-01 | 96.8% | 99.1% |
| 2vhlB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 47.0 | 4.15e-01 | 96.8% | 92.4% |
| 2icsA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 47.0 | 3.99e-01 | 95.2% | 97.0% |
| 3mtwA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.55 | 46.0 | 3.98e-01 | 95.2% | 95.0% |
| 1yrrA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 46.0 | 4.07e-01 | 95.2% | 97.8% |
| 3mkvA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 47.0 | 3.90e-01 | 96.8% | 95.4% |
| 2od0A00 | 3.30.1460.30 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › YgaC/TfoX-N like chaperone | 0.54 | 38.0 | 3.26e-01 | 74.2% | 83.5% |
| 4cqbA01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 47.0 | 4.04e-01 | 98.4% | 94.1% |
| 1xrtB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.54 | 47.0 | 3.85e-01 | 96.8% | 95.6% |
| 6phxA01 | 2.70.98.60 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › alpha-galactosidase from lactobacil brevis | 0.54 | 43.0 | 2.85e-01 | 93.5% | 44.1% |
| 4ub9A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.53 | 44.0 | 3.78e-01 | 91.9% | 94.0% |
| 1wrjA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.53 | 36.0 | 3.51e-01 | 88.7% | 64.2% |
| 1sfeA01 | 3.30.160.70 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Methylated DNA-protein cysteine methyltransferase domain | 0.53 | 41.0 | 3.79e-01 | 85.5% | 76.5% |
| 1k70A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.52 | 45.0 | 3.63e-01 | 95.2% | 81.0% |
| 3f2kB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.52 | 44.0 | 3.20e-01 | 96.8% | 76.0% |
| 3hz4A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 36.0 | 3.05e-01 | 75.8% | 76.7% |
| 3be7A01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.51 | 44.0 | 3.80e-01 | 96.8% | 94.9% |
| 4f0lB01 | 2.30.40.10 | Mainly Beta › Roll › Urease, subunit C; domain 1 › Urease, subunit C, domain 1 | 0.51 | 45.0 | 3.79e-01 | 100.0% | 98.1% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3214098 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.66 | 48.0 | 3.90e-01 | 77.4% | 48.7% |
| 3519113 | 330.1.1.24 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Paxt-1_C | 0.61 | 48.0 | 4.02e-01 | 87.1% | 53.6% |
| 5011557 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.58 | 50.0 | 4.14e-01 | 96.8% | 98.2% |
| 4338013 | 2002.1.1.274 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1, Amidohydro_3 | 0.57 | 49.0 | 3.06e-01 | 98.4% | 96.7% |
| 4329878 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.55 | 47.0 | 3.95e-01 | 96.8% | 100.0% |
| 5069903 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.55 | 49.0 | 3.91e-01 | 100.0% | 91.7% |
| 1296460 | 216.2.1.1 ↗ | a+b two layers › UBC-like › Thermo-DBP-RP2 C-terminal domain › Thermo-DBP-RP2 C-terminal domain › Thermo-DBP | 0.54 | 43.0 | 3.76e-01 | 95.2% | 77.4% |
| 3217557 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 44.0 | 3.57e-01 | 100.0% | 78.6% |
| 4335502 | 2.8.1.2 ↗ | beta barrels › OB-fold › mu transposases-C › mu transposases-C › Mu-transpos_C_2 | 0.54 | 38.0 | 3.45e-01 | 77.4% | 61.1% |
| 4603345 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.53 | 46.0 | 4.23e-01 | 96.8% | 97.5% |
| 2518545 | 65.1.1.0 ↗ | beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases | 0.53 | 40.0 | 3.80e-01 | 83.9% | 90.5% |
| 3671153 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.52 | 41.0 | 3.69e-01 | 87.1% | 85.6% |
D3
medium
residues 1-39_98-126
Domain cluster:
representative
CATH (38)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.79 | 54.0 | 4.76e-01 | 72.1% | 89.9% |
| 4h63K00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.78 | 55.0 | 4.81e-01 | 73.5% | 63.3% |
| 2lw1A00 | 1.10.287.380 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain | 0.77 | 54.0 | 5.01e-01 | 73.5% | 69.4% |
| 2wmmA01 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.77 | 49.0 | 5.63e-01 | 75.0% | 91.8% |
| 1dtoA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.76 | 55.0 | 4.77e-01 | 76.5% | 73.5% |
| 3tklB01 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.75 | 52.0 | 5.41e-01 | 72.1% | 90.3% |
| 3r84A00 | 1.10.287.3490 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.74 | 53.0 | 5.01e-01 | 75.0% | 63.0% |
| 4iggA01 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.73 | 50.0 | 5.07e-01 | 70.6% | 73.1% |
| 2js5A00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.73 | 52.0 | 5.20e-01 | 76.5% | 87.3% |
| 3d36B02 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.72 | 50.0 | 5.23e-01 | 72.1% | 91.8% |
| 3fxdB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.72 | 50.0 | 5.35e-01 | 73.5% | 89.7% |
| 1f6fA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.71 | 51.0 | 3.70e-01 | 75.0% | 89.6% |
| 1cxzB00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.71 | 49.0 | 4.55e-01 | 72.1% | 67.4% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 50.0 | 5.12e-01 | 76.5% | 81.8% |
| 2qf9A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.70 | 53.0 | 4.00e-01 | 80.9% | 47.4% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 48.0 | 4.35e-01 | 76.5% | 53.3% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.69 | 48.0 | 5.06e-01 | 73.5% | 100.0% |
| 3jcuZ00 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.68 | 47.0 | 4.89e-01 | 72.1% | 86.9% |
| 1zbtA01 | 6.10.140.1950 | Special › Helix non-globular › Helix Hairpins › | 0.67 | 52.0 | 4.84e-01 | 82.4% | 81.9% |
| 7ymiZ01 | 1.10.287.740 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Photosystem II PsbZ, reaction centre | 0.67 | 45.0 | 4.82e-01 | 70.6% | 84.5% |
| 1cunA01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.67 | 46.0 | 4.05e-01 | 72.1% | 70.6% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.66 | 46.0 | 4.83e-01 | 73.5% | 85.0% |
| 1urfA00 | 1.10.287.160 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat | 0.66 | 46.0 | 4.37e-01 | 73.5% | 67.9% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.66 | 46.0 | 3.95e-01 | 73.5% | 50.9% |
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.64 | 45.0 | 4.39e-01 | 75.0% | 71.8% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.64 | 44.0 | 4.67e-01 | 72.1% | 84.5% |
| 2dnxA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.63 | 45.0 | 3.69e-01 | 75.0% | 57.7% |
| 3rm5B02 | 1.20.910.10 | Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like | 0.61 | 48.0 | 3.36e-01 | 86.8% | 81.2% |
| 1j1jA02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.60 | 42.0 | 3.95e-01 | 75.0% | 57.6% |
| 3fppA03 | 6.10.140.1990 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 43.0 | 4.01e-01 | 76.5% | 81.8% |
| 7s0rB01 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.60 | 41.0 | 3.98e-01 | 75.0% | 64.5% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.59 | 51.0 | 4.16e-01 | 98.5% | 83.5% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.59 | 43.0 | 3.68e-01 | 77.9% | 80.5% |
| 5jrcA00 | 1.20.58.2140 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 48.0 | 3.61e-01 | 94.1% | 74.7% |
| 3pe0A01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 41.0 | 3.61e-01 | 73.5% | 89.1% |
| 3vm9A02 | 6.10.140.2110 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 40.0 | 4.32e-01 | 75.0% | 100.0% |
| 4abyD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 44.0 | 2.89e-01 | 98.5% | 21.2% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.51 | 37.0 | 3.68e-01 | 79.4% | 93.2% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3321387 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.77 | 54.0 | 4.75e-01 | 73.5% | 58.0% |
| 5070059 | 3834.1.1.25 ↗ | alpha bundles › TcA alpha pore-forming domain › TcA alpha pore-forming domain › TcA alpha pore-forming domain › DUF7121 | 0.76 | 55.0 | 3.63e-01 | 75.0% | 93.2% |
| 3593736 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.76 | 52.0 | 4.59e-01 | 72.1% | 65.0% |
| 4311810 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.76 | 52.0 | 5.08e-01 | 72.1% | 74.7% |
| 3969893 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.75 | 54.0 | 5.50e-01 | 75.0% | 98.5% |
| 5078048 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.73 | 51.0 | 4.99e-01 | 73.5% | 74.7% |
| 3410365 | 2004.1.1.184 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11 | 0.68 | 47.0 | 2.93e-01 | 73.5% | 12.9% |
| 2663455 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.67 | 47.0 | 4.74e-01 | 73.5% | 95.6% |
| 5045400 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.66 | 47.0 | 2.90e-01 | 75.0% | 14.5% |
| 3972992 | 605.1.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase | 0.64 | 46.0 | 4.69e-01 | 75.0% | 76.9% |
| 4774281 | 1147.1.1.1 ↗ | alpha bundles › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › RNA polymerase II elongation factor ELL2 C-terminal domain › Occludin_ELL | 0.64 | 46.0 | 3.97e-01 | 79.4% | 47.7% |
| 3713201 | 4323.1.1.1 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I | 0.64 | 45.0 | 3.61e-01 | 76.5% | 97.9% |
| 3545387 | 3602.1.1.0 ↗ | alpha bundles › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain › Kinase suppressor of Ras 1 helical hairpin domain | 0.64 | 45.0 | 3.87e-01 | 75.0% | 62.7% |
| 3600361 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.63 | 44.0 | 3.98e-01 | 73.5% | 62.1% |
| 3705683 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.61 | 45.0 | 4.03e-01 | 79.4% | 92.0% |
| 3278180 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.61 | 50.0 | 3.00e-01 | 94.1% | 19.1% |
| 4030051 | 2004.1.1.480 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_21, AAA_29 | 0.59 | 49.0 | 3.11e-01 | 95.6% | 31.3% |
| 3449084 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.56 | 40.0 | 3.42e-01 | 75.0% | 92.4% |
| 2896608 | 150.3.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine | 0.53 | 45.0 | 3.79e-01 | 98.5% | 83.6% |
| 3917098 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.53 | 45.0 | 2.71e-01 | 100.0% | 77.1% |
| 3750377 | 605.1.1.254 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › MRVI1 | 0.52 | 39.0 | 3.78e-01 | 82.4% | 78.8% |