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Ig8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00876
Bact-VirIg8144_scaffold_2_curated_closed_complete_start-adj_prodigal-single.1__X__X__00876
Identity
- Kingdom:
- phage
Quality
87.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-86
Domain cluster:
rep: NC_021791.1__YP_008241039.1__Phi12-1_gp60__00060__D22-65
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.81 | 60.0 | 5.96e-01 | 100.0% | 76.4% |
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.80 | 58.0 | 6.24e-01 | 98.1% | 95.3% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.72 | 53.0 | 5.42e-01 | 100.0% | 82.4% |
| 1clwA00 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.69 | 53.0 | 3.01e-01 | 100.0% | 8.1% |
| 2jroA01 | 3.30.1910.10 | Alpha Beta › 2-Layer Sandwich › so0334 like fold › so0334 like domain | 0.69 | 50.0 | 4.73e-01 | 100.0% | 64.6% |
| 4bndA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.66 | 53.0 | 3.85e-01 | 100.0% | 31.4% |
| 3k2tA01 | 3.30.505.50 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain | 0.61 | 46.0 | 4.84e-01 | 98.1% | 100.0% |
| 2zosB01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.60 | 52.0 | 3.73e-01 | 100.0% | 34.0% |
| 3mazA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 48.0 | 4.06e-01 | 100.0% | 79.8% |
| 4gc1A01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.57 | 40.0 | 3.35e-01 | 100.0% | 39.4% |
| 4maaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 44.0 | 3.27e-01 | 100.0% | 29.4% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 47.0 | 3.02e-01 | 98.1% | 26.8% |
| 1dm9A00 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.56 | 48.0 | 3.89e-01 | 98.1% | 75.0% |
| 3gqbA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.55 | 46.0 | 4.29e-01 | 98.1% | 73.2% |
| 4okcA01 | 2.90.10.10 | Mainly Beta › Orthogonal Prism › Agglutinin, subunit A › Bulb-type lectin domain | 0.55 | 41.0 | 3.86e-01 | 84.9% | 95.7% |
| 4oagB02 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.54 | 44.0 | 3.18e-01 | 100.0% | 69.4% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 42.0 | 3.31e-01 | 98.1% | 44.9% |
| 1cdwA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.52 | 37.0 | 3.19e-01 | 75.5% | 48.8% |
| 2otnB01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 40.0 | 3.15e-01 | 98.1% | 45.2% |
| 4j0wA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 44.0 | 2.73e-01 | 98.1% | 22.9% |
| 1qnaA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.51 | 37.0 | 3.09e-01 | 77.4% | 47.3% |
ECOD (44)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.90 | 63.0 | 6.81e-01 | 100.0% | 86.7% |
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.88 | 66.0 | 7.27e-01 | 100.0% | 97.7% |
| 3900165 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.88 | 64.0 | 7.06e-01 | 98.1% | 95.3% |
| 3623217 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.85 | 64.0 | 6.57e-01 | 100.0% | 84.0% |
| 3498702 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.84 | 64.0 | 6.92e-01 | 96.2% | 95.6% |
| 3917719 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.84 | 61.0 | 6.53e-01 | 98.1% | 91.1% |
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.83 | 59.0 | 3.41e-01 | 100.0% | 8.8% |
| 1505155 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.82 | 61.0 | 6.01e-01 | 100.0% | 75.0% |
| 1281772 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.80 | 59.0 | 5.90e-01 | 100.0% | 77.8% |
| 3987740 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.80 | 55.0 | 6.08e-01 | 100.0% | 95.0% |
| 1107990 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.72 | 53.0 | 5.45e-01 | 100.0% | 84.0% |
| 3545467 | 391.1.2.10 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st | 0.72 | 44.0 | 4.84e-01 | 88.7% | 80.0% |
| 3251055 | 3856.1.2.1 ↗ | beta sandwiches › Putative tailspike protein Orf210 N-terminal domain › Putative tailspike protein Orf210 N-terminal domain › tailspike protein Orf211 N-terminal domain › Phage_tail_beta | 0.71 | 63.0 | 5.75e-01 | 100.0% | 94.3% |
| 5071089 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.70 | 49.0 | 5.04e-01 | 88.7% | 78.0% |
| 5028514 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.70 | 50.0 | 4.87e-01 | 90.6% | 68.3% |
| 4991056 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.70 | 48.0 | 4.82e-01 | 90.6% | 70.9% |
| 4927153 | 375.1.1.63 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › LysW-like_globular | 0.69 | 47.0 | 4.74e-01 | 90.6% | 70.9% |
| 5069323 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 48.0 | 4.97e-01 | 90.6% | 80.0% |
| 4999472 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.68 | 49.0 | 3.36e-01 | 100.0% | 21.6% |
| 3278964 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.67 | 49.0 | 3.59e-01 | 100.0% | 28.0% |
| 3927335 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.67 | 49.0 | 2.99e-01 | 77.4% | 13.0% |
| 3271846 | 391.1.2.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related | 0.67 | 42.0 | 4.21e-01 | 84.9% | 61.8% |
| 3245395 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.66 | 47.0 | 2.82e-01 | 75.5% | 11.4% |
| 3906671 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 43.0 | 4.76e-01 | 71.7% | 90.0% |
| 3474295 | 2004.5.1.3 ↗ | a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN | 0.66 | 59.0 | 3.78e-01 | 100.0% | 38.3% |
| 3899210 | 2007.1.2.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor | 0.65 | 55.0 | 4.29e-01 | 100.0% | 43.5% |
| 4177188 | 3312.1.1.0 ↗ | a+b two layers › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease | 0.65 | 54.0 | 4.83e-01 | 100.0% | 65.3% |
| 3961965 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.65 | 49.0 | 4.71e-01 | 100.0% | 72.3% |
| 4926846 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 55.0 | 3.97e-01 | 100.0% | 41.2% |
| 4588602 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.65 | 49.0 | 4.99e-01 | 100.0% | 94.0% |
| 3820673 | 377.1.1.47 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › C1-like_CT | 0.64 | 45.0 | 4.36e-01 | 75.5% | 80.0% |
| 3502260 | 214.1.1.9 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7063 | 0.64 | 52.0 | 4.03e-01 | 100.0% | 40.0% |
| 4668201 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.62 | 41.0 | 4.25e-01 | 77.4% | 74.0% |
| 4554426 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.61 | 47.0 | 4.73e-01 | 100.0% | 90.7% |
| 2088430 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.60 | 47.0 | 4.56e-01 | 100.0% | 80.3% |
| 3961969 | 3097.1.1.1 ↗ | a+b two layers › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosome-associated factor Y › Ribosom_S30AE_C | 0.59 | 46.0 | 4.49e-01 | 100.0% | 81.7% |
| 4336500 | 4.1.1.175 ↗ | beta barrels › SH3 › SH3 › SH3 › MSSS | 0.58 | 39.0 | 3.91e-01 | 79.2% | 67.3% |
| 3923314 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.56 | 47.0 | 3.09e-01 | 96.2% | 25.7% |
| 4578847 | 702.1.1.3 ↗ | beta duplicates or obligate multimers › beta-hairpin stack › beta-hairpin stack › beta-hairpin stack › Choline_bind_1,Choline_bind_2 | 0.56 | 48.0 | 2.94e-01 | 100.0% | 18.3% |
| 3998555 | 327.11.2.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_10 | 0.54 | 39.0 | 3.56e-01 | 81.1% | 57.5% |
| 3618164 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.53 | 45.0 | 2.56e-01 | 96.2% | 74.2% |
| 3727780 | 1.1.15.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like | 0.53 | 44.0 | 2.78e-01 | 96.2% | 91.7% |
| 3886357 | 5.1.4.47 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PHTB1_N | 0.51 | 43.0 | 2.68e-01 | 100.0% | 26.8% |
| 4271896 | 5.1.3.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SdiA-regulated | 0.51 | 42.0 | 2.72e-01 | 98.1% | 28.2% |
D2
high
residues 97-192
Domain cluster:
rep: NC_073094.1__YP_010742931.1__QAY90_gp51__00051__D40-112
D3
high
residues 196-286
Domain cluster:
rep: MW824397.1__QZI91684.1__PODOV088v1_p0023__00023__D41-137
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rcnA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 37.0 | 4.28e-01 | 71.4% | 93.4% |
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 39.0 | 3.77e-01 | 100.0% | 60.4% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.56 | 46.0 | 3.31e-01 | 94.5% | 51.5% |
| 1ckmA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 34.0 | 3.55e-01 | 71.4% | 67.5% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.55 | 43.0 | 4.59e-01 | 85.7% | 97.5% |
| 5e7gA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 33.0 | 3.49e-01 | 90.1% | 65.1% |
| 2as0A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.54 | 37.0 | 4.13e-01 | 82.4% | 95.7% |
| 4f7kA02 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 45.0 | 3.99e-01 | 95.6% | 76.1% |
| 1bxvA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.53 | 40.0 | 4.01e-01 | 96.7% | 81.3% |
| 2jemA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.52 | 41.0 | 3.20e-01 | 91.2% | 83.6% |
| 6tnyB02 | 2.40.50.430 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.51 | 43.0 | 4.02e-01 | 100.0% | 75.0% |
| 2ux6A00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.51 | 39.0 | 3.55e-01 | 95.6% | 59.8% |
| 2b78A01 | 2.30.130.10 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › PUA domain | 0.51 | 35.0 | 3.94e-01 | 83.5% | 100.0% |
| 1nlrA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.51 | 41.0 | 3.23e-01 | 92.3% | 81.1% |
| 7r9xA02 | 3.30.559.30 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Nonribosomal peptide synthetase, condensation domain | 0.51 | 36.0 | 2.72e-01 | 74.7% | 65.0% |
| 3cnrB00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.50 | 39.0 | 3.92e-01 | 84.6% | 89.2% |
| 3vl9B00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.50 | 41.0 | 3.19e-01 | 92.3% | 69.7% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3839187 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.63 | 44.0 | 3.58e-01 | 72.5% | 49.4% |
| 3839941 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.60 | 42.0 | 3.43e-01 | 72.5% | 48.2% |
| 5033076 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 36.0 | 4.25e-01 | 98.9% | 100.0% |
| 3601876 | 2.1.1.107 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RRP40_S1 | 0.58 | 43.0 | 4.35e-01 | 80.2% | 100.0% |
| 4992873 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 36.0 | 4.20e-01 | 70.3% | 98.3% |
| 4204475 | 2.10.1.1 ↗ | beta barrels › OB-fold › CheW › CheW › CheW | 0.57 | 40.0 | 3.35e-01 | 72.5% | 48.7% |
| 5044269 | 4077.1.1.0 ↗ | beta sandwiches › Beta-galactosidase LacA, domain 3 › Beta-galactosidase LacA, domain 3 › Beta-galactosidase LacA, domain 3 | 0.57 | 41.0 | 4.46e-01 | 100.0% | 100.0% |
| 4069291 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.56 | 36.0 | 4.10e-01 | 85.7% | 96.7% |
| 4582116 | 1.1.9.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB-C_2 | 0.56 | 37.0 | 4.14e-01 | 82.4% | 93.8% |
| 4384734 | 1.1.9.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › TruB_C | 0.55 | 36.0 | 4.06e-01 | 82.4% | 93.8% |
| 5028349 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.54 | 46.0 | 4.21e-01 | 94.5% | 70.0% |
| 5081569 | 1.1.9.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA | 0.54 | 38.0 | 3.72e-01 | 85.7% | 67.0% |
| 3978189 | 221.1.2.17 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Alpha-L RNA-binding motif › DUF1062 | 0.53 | 44.0 | 4.39e-01 | 93.4% | 98.9% |
| 3775447 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.53 | 32.0 | 3.26e-01 | 90.1% | 58.9% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.53 | 40.0 | 3.78e-01 | 82.4% | 90.0% |
| 4037620 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.52 | 29.0 | 2.91e-01 | 94.5% | 49.5% |
| 5056739 | 3156.1.1.0 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related | 0.52 | 39.0 | 3.66e-01 | 97.8% | 63.3% |
| 2790638 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.52 | 33.0 | 3.45e-01 | 86.8% | 71.1% |
| 4524323 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.51 | 33.0 | 3.33e-01 | 86.8% | 63.3% |
| 3759363 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.51 | 32.0 | 3.18e-01 | 86.8% | 57.0% |
| 5038418 | 3156.1.1.3 ↗ | beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related › Copper-bind | 0.51 | 43.0 | 3.71e-01 | 95.6% | 63.3% |
| 4124563 | 11.1.1.335 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › GlgB_N | 0.50 | 30.0 | 2.98e-01 | 94.5% | 53.7% |
D4
high
residues 299-354
Domain cluster:
rep: IMGVR_UViG_3300003630_000209-3300003630-lovalP4_1001755__D47-102
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hf2A02 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.75 | 62.0 | 4.97e-01 | 100.0% | 48.1% |
| 4v02C00 | 2.160.20.70 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.71 | 59.0 | 4.60e-01 | 100.0% | 43.4% |
| 4w8qA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.69 | 59.0 | 3.94e-01 | 100.0% | 36.8% |
| 1rwrA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.66 | 55.0 | 3.57e-01 | 100.0% | 28.6% |
| 5jlvC00 | 2.160.20.80 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › E3 ubiquitin-protein ligase SopA | 0.66 | 55.0 | 4.73e-01 | 100.0% | 58.8% |
| 3ljyA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.66 | 57.0 | 3.78e-01 | 100.0% | 25.1% |
| 3petA00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.64 | 53.0 | 3.64e-01 | 100.0% | 25.2% |
| 3qg5C02 | 3.30.160.210 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › DNA double-strand break repair nuclease | 0.61 | 45.0 | 4.20e-01 | 80.4% | 78.9% |
| 3jx8A00 | 2.160.20.120 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.60 | 51.0 | 3.41e-01 | 100.0% | 23.5% |
| 2rc5A02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.59 | 46.0 | 3.42e-01 | 87.5% | 93.2% |
| 2cu2A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.59 | 43.0 | 2.73e-01 | 80.4% | 22.7% |
| 4fx5A02 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.58 | 48.0 | 3.46e-01 | 100.0% | 43.5% |
| 5f2kB02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 49.0 | 3.41e-01 | 100.0% | 46.3% |
| 3gqvA02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.56 | 41.0 | 2.96e-01 | 82.1% | 52.1% |
| 3rm3A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 47.0 | 3.17e-01 | 100.0% | 47.2% |
| 5bovB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 2.98e-01 | 100.0% | 55.0% |
| 6h0cA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.55 | 42.0 | 3.23e-01 | 89.3% | 70.4% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4020264 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.88 | 74.0 | 5.89e-01 | 100.0% | 48.6% |
| 4929387 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.82 | 66.0 | 6.20e-01 | 100.0% | 72.9% |
| 2516583 | 207.14.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A › Bactofilin | 0.80 | 65.0 | 5.56e-01 | 100.0% | 55.6% |
| 3997590 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.80 | 64.0 | 6.35e-01 | 100.0% | 85.0% |
| 4935712 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.78 | 63.0 | 4.71e-01 | 100.0% | 35.2% |
| 5020282 | 208.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes › Hexapep | 0.78 | 64.0 | 5.38e-01 | 100.0% | 53.7% |
| 4330222 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.78 | 65.0 | 5.00e-01 | 100.0% | 42.5% |
| 4497421 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.78 | 63.0 | 5.42e-01 | 100.0% | 56.7% |
| 3596944 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.77 | 56.0 | 4.11e-01 | 100.0% | 29.0% |
| 5006685 | 208.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Trimeric LpxA-like enzymes › Trimeric LpxA-like enzymes | 0.76 | 61.0 | 4.61e-01 | 100.0% | 36.4% |
| 4131560 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.75 | 62.0 | 4.81e-01 | 100.0% | 42.5% |
| 7233 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.75 | 62.0 | 4.96e-01 | 100.0% | 47.7% |
| 4472803 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.73 | 60.0 | 4.99e-01 | 100.0% | 52.0% |
| 4651440 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.73 | 61.0 | 4.93e-01 | 100.0% | 48.2% |
| 4459287 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.72 | 60.0 | 4.95e-01 | 100.0% | 50.5% |
| 4496449 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.72 | 60.0 | 4.96e-01 | 100.0% | 52.0% |
| 3572525 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.71 | 52.0 | 4.71e-01 | 98.2% | 56.2% |
| 2163978 | 207.10.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Arctic yeast antifreeze protein › Arctic yeast antifreeze protein › Ice_binding | 0.70 | 59.0 | 3.94e-01 | 100.0% | 25.6% |
| 5068801 | 207.2.1.13 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › NosD | 0.69 | 59.0 | 3.89e-01 | 100.0% | 24.8% |
| 4419821 | 207.5.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Cell-division inhibitor MinC-C › Cell-division inhibitor MinC-C › MinC_C | 0.67 | 59.0 | 4.64e-01 | 100.0% | 47.8% |
| 3803729 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.67 | 44.0 | 4.22e-01 | 100.0% | 58.5% |
| 7226 | 207.2.1.15 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › TPS | 0.66 | 55.0 | 3.57e-01 | 100.0% | 28.6% |
| 4406918 | 207.6.1.16 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › FARP | 0.66 | 53.0 | 4.12e-01 | 100.0% | 39.2% |
| 4643528 | 208.2.1.11 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain › Ice_nucleation | 0.65 | 48.0 | 3.91e-01 | 100.0% | 40.9% |
| 3246091 | 389.1.1.157 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Epiglycanin_TR | 0.65 | 54.0 | 3.86e-01 | 98.2% | 61.7% |
| 2485695 | 207.15.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › beta-helix of amnionless (AMN) extracellular domain › beta-helix of amnionless (AMN) extracellular domain › Amnionless | 0.62 | 45.0 | 3.98e-01 | 82.1% | 52.7% |
| 3708280 | 207.3.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Insect cysteine-rich antifreeze protein › Insect cysteine-rich antifreeze protein | 0.60 | 38.0 | 3.35e-01 | 100.0% | 41.2% |
| 3650986 | 207.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like | 0.60 | 49.0 | 3.18e-01 | 100.0% | 19.0% |
| 5058805 | 207.8.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Stabilizer of iron transporter sufD › Stabilizer of iron transporter sufD › SUFBD | 0.59 | 48.0 | 2.90e-01 | 96.4% | 30.4% |
| 3189969 | 208.2.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded left-handed beta-helix › Adhesin YadA, collagen-binding domain › Adhesin YadA, collagen-binding domain | 0.56 | 39.0 | 3.07e-01 | 98.2% | 30.3% |
| 3870521 | 207.14.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Bactofilin A › Bactofilin A | 0.54 | 43.0 | 3.96e-01 | 92.9% | 98.7% |
D5
high
residues 372-417
Domain cluster:
representative
D6
high
residues 432-531
Domain cluster:
rep: GWB1_scaffold_combined_curated_closed_complete_prodigal-single.1__X__X__00439__D238-331
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5l56A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 43.0 | 4.62e-01 | 100.0% | 82.1% |
| 3oq3B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 45.0 | 4.51e-01 | 100.0% | 74.0% |
| 8b6zA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.60 | 46.0 | 4.93e-01 | 100.0% | 100.0% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 48.0 | 4.61e-01 | 100.0% | 77.6% |
| 1r5bA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.58 | 45.0 | 4.76e-01 | 100.0% | 95.5% |
| 3vsvA02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 52.0 | 4.82e-01 | 100.0% | 100.0% |
| 3fawA01 | 2.60.40.1220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 39.0 | 4.03e-01 | 100.0% | 75.0% |
| 3ooxA00 | 2.60.120.330 | Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain | 0.57 | 47.0 | 3.39e-01 | 91.0% | 75.4% |
| 1w9sA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.57 | 51.0 | 4.62e-01 | 100.0% | 98.5% |
| 4hsqA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 50.0 | 4.48e-01 | 100.0% | 68.8% |
| 3o3uN03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 45.0 | 4.40e-01 | 100.0% | 79.3% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 4.18e-01 | 100.0% | 78.5% |
| 5szrA04 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.54 | 41.0 | 4.06e-01 | 100.0% | 77.1% |
| 2piaA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 45.0 | 4.53e-01 | 98.0% | 89.4% |
| 7ehgC01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 47.0 | 4.38e-01 | 100.0% | 93.8% |
| 4aw7A03 | 2.60.120.1200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 47.0 | 4.42e-01 | 99.0% | 91.0% |
| 3nngA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 46.0 | 4.10e-01 | 100.0% | 90.2% |
| 2dnlA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 39.0 | 4.06e-01 | 87.0% | 87.6% |
| 2vbkA00 | 2.160.20.10 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › Single-stranded right-handed beta-helix, Pectin lyase-like | 0.53 | 38.0 | 2.43e-01 | 100.0% | 14.7% |
| 2lp6A00 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.53 | 42.0 | 4.40e-01 | 98.0% | 95.6% |
| 6bxzA02 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.52 | 40.0 | 4.00e-01 | 100.0% | 80.2% |
| 5zruA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 4.03e-01 | 100.0% | 99.4% |
| 2woyA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 47.0 | 4.03e-01 | 100.0% | 78.5% |
| 4kq7A02 | 2.60.120.1390 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF2961 | 0.52 | 46.0 | 3.67e-01 | 100.0% | 65.9% |
| 4ofqA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 47.0 | 4.06e-01 | 100.0% | 78.1% |
| 2wyhA07 | 2.60.40.2220 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 35.0 | 3.88e-01 | 86.0% | 90.9% |
| 1nkgA03 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 46.0 | 3.89e-01 | 100.0% | 97.7% |
| 4b97A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.52 | 45.0 | 4.00e-01 | 100.0% | 88.7% |
| 1vjqA00 | 3.30.70.340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Metallocarboxypeptidase-like | 0.51 | 32.0 | 3.55e-01 | 86.0% | 83.6% |
| 4cvuA01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 45.0 | 3.66e-01 | 100.0% | 96.0% |
| 5ek8A01 | 2.60.40.3330 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 35.0 | 3.29e-01 | 87.0% | 56.3% |
| 3km3B00 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.51 | 44.0 | 3.90e-01 | 100.0% | 82.7% |
| 1vf7F01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.51 | 44.0 | 4.43e-01 | 98.0% | 99.0% |
| 1a7hA00 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.51 | 33.0 | 3.54e-01 | 100.0% | 77.9% |
| 3i2dA01 | 2.60.120.780 | Mainly Beta › Sandwich › Jelly Rolls › PINIT domain | 0.50 | 44.0 | 3.88e-01 | 100.0% | 67.7% |
ECOD (27)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3899153 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.66 | 49.0 | 5.08e-01 | 100.0% | 83.2% |
| 2797409 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.64 | 48.0 | 4.81e-01 | 100.0% | 76.9% |
| 4955177 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.64 | 44.0 | 4.42e-01 | 99.0% | 68.6% |
| 4959774 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.64 | 42.0 | 4.36e-01 | 100.0% | 72.0% |
| 4965938 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 54.0 | 5.31e-01 | 100.0% | 85.5% |
| 3274747 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 40.0 | 4.39e-01 | 100.0% | 80.0% |
| 5012858 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.63 | 54.0 | 4.87e-01 | 100.0% | 69.6% |
| 5038124 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 40.0 | 4.23e-01 | 100.0% | 76.5% |
| 3249211 | 11.1.1.802 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF8390 | 0.61 | 42.0 | 4.43e-01 | 100.0% | 78.9% |
| 3255350 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.60 | 39.0 | 3.96e-01 | 100.0% | 66.0% |
| 4135206 | 11.1.1.33 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arch_flagellin | 0.59 | 53.0 | 4.57e-01 | 100.0% | 69.4% |
| 5081164 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 47.0 | 4.60e-01 | 100.0% | 80.0% |
| 5083772 | 12.6.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related | 0.58 | 51.0 | 4.59e-01 | 100.0% | 70.0% |
| 5009359 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 46.0 | 4.51e-01 | 100.0% | 80.0% |
| 2549615 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 44.0 | 4.41e-01 | 100.0% | 85.0% |
| 4952062 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.56 | 49.0 | 4.12e-01 | 100.0% | 80.0% |
| 3253793 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 3.98e-01 | 99.0% | 71.4% |
| 3804238 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 50.0 | 4.45e-01 | 100.0% | 82.1% |
| 5009756 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.56 | 40.0 | 3.77e-01 | 76.0% | 78.4% |
| 3302463 | 207.1.1.1 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_1 | 0.55 | 46.0 | 2.99e-01 | 100.0% | 19.6% |
| 4186020 | 4261.1.1.1 ↗ | a+b two layers › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA C-terminal domain-like › TrkA_C | 0.55 | 37.0 | 3.87e-01 | 89.0% | 76.7% |
| 4619601 | 10.32.1.48 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_26 | 0.55 | 44.0 | 4.17e-01 | 100.0% | 72.0% |
| 5064207 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.54 | 46.0 | 4.64e-01 | 100.0% | 95.0% |
| 5054083 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.53 | 48.0 | 4.60e-01 | 100.0% | 98.3% |
| 4382801 | 1.1.7.50 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › EF-G_D2 | 0.52 | 44.0 | 3.99e-01 | 100.0% | 66.9% |
| 4965077 | 4161.1.1.2 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC_N | 0.50 | 44.0 | 3.32e-01 | 100.0% | 99.2% |
| 3756125 | 11.1.1.127 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL6Ra-bind | 0.50 | 36.0 | 3.61e-01 | 100.0% | 74.3% |